RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 RNF182Q8N6D2 247 aa13.3□□□□□ -0.28
PDLIM7-209ENST00000503346 LRRC20Q8TCA0 184 aa13.3□□□□□ -0.28
PDLIM7-209ENST00000503346 SLC50A1Q9BRV3 221 aa13.3□□□□□ -0.28
PDLIM7-209ENST00000503346 ZNF331Q9NQX6 463 aaPredicted RBP13.3□□□□□ -0.28
PDLIM7-209ENST00000503346 TMEM14CQ9P0S9 112 aa13.3□□□□□ -0.28
PDLIM7-209ENST00000503346 A8MTW9 85 aa13.29□□□□□ -0.28
PDLIM7-209ENST00000503346 G3V3Q6 166 aa13.29□□□□□ -0.28
PDLIM7-209ENST00000503346 H3BQ15 152 aa13.29□□□□□ -0.28
PDLIM7-209ENST00000503346 GUK1Q16774 197 aa13.29□□□□□ -0.28
PDLIM7-209ENST00000503346 CSNK1G2-AS1Q8NCQ2 148 aa13.29□□□□□ -0.28
PDLIM7-209ENST00000503346 RARRES2Q99969 163 aa13.29□□□□□ -0.28
PDLIM7-209ENST00000503346 SNRPCP09234 159 aaKnown RBP13.28□□□□□ -0.28
PDLIM7-209ENST00000503346 HLA-DMBP28068 263 aa13.28□□□□□ -0.28
PDLIM7-209ENST00000503346 ZNF266Q14584 549 aa13.28□□□□□ -0.28
PDLIM7-209ENST00000503346 PSG3Q16557 428 aa13.28□□□□□ -0.28
PDLIM7-209ENST00000503346 INO80EQ8NBZ0 244 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-209ENST00000503346 ZNF738Q8NE65 137 aa13.28□□□□□ -0.28
PDLIM7-209ENST00000503346 OR11H2Q8NH07 326 aa13.28□□□□□ -0.28
PDLIM7-209ENST00000503346 SAT2Q96F10 170 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-209ENST00000503346 C1QTNF4Q9BXJ3 329 aa13.28□□□□□ -0.28
PDLIM7-209ENST00000503346 MRPL32Q9BYC8 188 aaKnown RBP13.28□□□□□ -0.28
PDLIM7-209ENST00000503346 TNFSF18Q9UNG2 199 aa13.28□□□□□ -0.28
PDLIM7-209ENST00000503346 FXYD6-FXYD2A0A087WZ82 144 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 RNF222A6NCQ9 220 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 SLC17A3O00476 420 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 ZNF253O75346 499 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 IGKV3-20P01619 116 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 FFAR4Q5NUL3 377 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 MIR17HGQ75NE6 70 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 OR4B1Q8NGF8 309 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 FAM167A-AS1Q96KT0 104 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 SLC25A2Q9BXI2 301 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 ZNF586Q9NXT0 402 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 CLEC5AQ9NY25 188 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 TIMM9Q9Y5J7 89 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 AGRNO00468 2067 aa13.27□□□□□ -0.29
PDLIM7-209ENST00000503346 A0A0J9YWU9 116 aa13.26□□□□□ -0.29
PDLIM7-209ENST00000503346 ZNF705EA8MWA4 302 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-209ENST00000503346 H3BTX0 84 aa13.26□□□□□ -0.29
PDLIM7-209ENST00000503346 DUSP14O95147 198 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-209ENST00000503346 HIST1H1EP10412 219 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-209ENST00000503346 PSG9Q00887 426 aa13.26□□□□□ -0.29
PDLIM7-209ENST00000503346 XCL2Q9UBD3 114 aa13.26□□□□□ -0.29
PDLIM7-209ENST00000503346 FUT9Q9Y231 359 aa13.26□□□□□ -0.29
PDLIM7-209ENST00000503346 TRBV19A0A075B6N1 114 aa13.25□□□□□ -0.29
PDLIM7-209ENST00000503346 CNN1P51911 297 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-209ENST00000503346 AMTNQ6UX39 209 aa13.25□□□□□ -0.29
PDLIM7-209ENST00000503346 IL17DQ8TAD2 202 aa13.25□□□□□ -0.29
PDLIM7-209ENST00000503346 PYYP10082 97 aa13.24□□□□□ -0.29
PDLIM7-209ENST00000503346 PDE6HQ13956 83 aa13.24□□□□□ -0.29
PDLIM7-209ENST00000503346 OR8A1Q8NGG7 326 aa13.24□□□□□ -0.29
PDLIM7-209ENST00000503346 RPUSD4Q96CM3 377 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-209ENST00000503346 SLC35B3Q9H1N7 401 aa13.24□□□□□ -0.29
PDLIM7-209ENST00000503346 C11orf68Q9H3H3 251 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-209ENST00000503346 RFNGQ9Y644 331 aa13.24□□□□□ -0.29
PDLIM7-209ENST00000503346 ZNF705DP0CH99 300 aaPredicted RBP13.23□□□□□ -0.29
PDLIM7-209ENST00000503346 ZNF705BP0CI00 300 aaPredicted RBP13.23□□□□□ -0.29
PDLIM7-209ENST00000503346 RHOBP62745 196 aa13.23□□□□□ -0.29
PDLIM7-209ENST00000503346 ACOT6Q3I5F7 207 aaPredicted RBP13.23□□□□□ -0.29
PDLIM7-209ENST00000503346 CASC10Q5T4H9 136 aa13.23□□□□□ -0.29
PDLIM7-209ENST00000503346 OR2G3Q8NGZ4 309 aa13.23□□□□□ -0.29
PDLIM7-209ENST00000503346 MFFQ9GZY8 342 aa13.23□□□□□ -0.29
PDLIM7-209ENST00000503346 OR51M1Q9H341 326 aa13.23□□□□□ -0.29
PDLIM7-209ENST00000503346 X6R8D5 127 aa13.23□□□□□ -0.29
PDLIM7-209ENST00000503346 NDUFB4O95168 129 aa13.22□□□□□ -0.29
PDLIM7-209ENST00000503346 M6PRP20645 277 aa13.22□□□□□ -0.29
PDLIM7-209ENST00000503346 FXYD7P58549 80 aa13.22□□□□□ -0.29
PDLIM7-209ENST00000503346 Q8NAQ8 132 aa13.22□□□□□ -0.29
PDLIM7-209ENST00000503346 HSD17B11Q8NBQ5 300 aa13.22□□□□□ -0.29
PDLIM7-209ENST00000503346 MRPL53Q96EL3 112 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-209ENST00000503346 PSMG3Q9BT73 122 aaPredicted RBP13.22□□□□□ -0.29
PDLIM7-209ENST00000503346 PAXXQ9BUH6 204 aa13.22□□□□□ -0.29
PDLIM7-209ENST00000503346 STARD9Q9P2P6 4700 aa13.22□□□□□ -0.29
PDLIM7-209ENST00000503346 ZNF705FA8MVS1 300 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-209ENST00000503346 SMLR1H3BR10 107 aa13.21□□□□□ -0.29
PDLIM7-209ENST00000503346 MIFP14174 115 aa13.21□□□□□ -0.29
PDLIM7-209ENST00000503346 ATP6V0CP27449 155 aa13.21□□□□□ -0.29
PDLIM7-209ENST00000503346 HIST1H1AQ02539 215 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-209ENST00000503346 ZNF705AQ6ZN79 300 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-209ENST00000503346 RNF141Q8WVD5 230 aa13.21□□□□□ -0.29
PDLIM7-209ENST00000503346 FXYD5Q96DB9 178 aa13.21□□□□□ -0.29
PDLIM7-209ENST00000503346 PRAC2D3DTV9 90 aa13.2□□□□□ -0.3
PDLIM7-209ENST00000503346 ARPC5O15511 151 aa13.2□□□□□ -0.3
PDLIM7-209ENST00000503346 AMBPP02760 352 aa13.2□□□□□ -0.3
PDLIM7-209ENST00000503346 NBEAP1P0C6P0 100 aa13.2□□□□□ -0.3
PDLIM7-209ENST00000503346 TAS2R45P59539 299 aa13.2□□□□□ -0.3
PDLIM7-209ENST00000503346 KHDC3LQ587J8 217 aa13.2□□□□□ -0.3
PDLIM7-209ENST00000503346 RPL7L1Q6DKI1 246 aaKnown RBP13.2□□□□□ -0.3
PDLIM7-209ENST00000503346 ZFAND6Q6FIF0 208 aa13.2□□□□□ -0.3
PDLIM7-209ENST00000503346 BLNKQ8WV28 456 aa13.2□□□□□ -0.3
PDLIM7-209ENST00000503346 ZNF503Q96F45 646 aa13.2□□□□□ -0.3
PDLIM7-209ENST00000503346 PRELID1Q9Y255 219 aa13.2□□□□□ -0.3
PDLIM7-209ENST00000503346 BORCS7-ASMTA0A0B4J1R7 106 aa13.19□□□□□ -0.3
PDLIM7-209ENST00000503346 IGHV4-28A0A0C4DH34 117 aa13.19□□□□□ -0.3
PDLIM7-209ENST00000503346 OR7C2O60412 319 aa13.19□□□□□ -0.3
PDLIM7-209ENST00000503346 RAB2AP61019 212 aa13.19□□□□□ -0.3
PDLIM7-209ENST00000503346 SERF2P84101 59 aa13.19□□□□□ -0.3
PDLIM7-209ENST00000503346 IGF2BP2-AS1Q96M15 143 aa13.19□□□□□ -0.3
PDLIM7-209ENST00000503346 NEU1Q99519 415 aa13.19□□□□□ -0.3
PDLIM7-209ENST00000503346 KMT2CQ8NEZ4 4911 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms