RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 BTF3L4Q96K17 158 aa16.97■□□□□ 0.31
PTPN13-205ENST00000502971 AAMDCQ9H7C9 122 aa16.97■□□□□ 0.31
PTPN13-205ENST00000502971 OSTCQ9NRP0 149 aa16.97■□□□□ 0.31
PTPN13-205ENST00000502971 SLC17A3O00476 420 aa16.96■□□□□ 0.31
PTPN13-205ENST00000502971 ZNF253O75346 499 aa16.96■□□□□ 0.31
PTPN13-205ENST00000502971 MGST1P10620 155 aaKnown RBP16.96■□□□□ 0.31
PTPN13-205ENST00000502971 PSMB8P28062 276 aa16.96■□□□□ 0.31
PTPN13-205ENST00000502971 TMEM95Q3KNT9 176 aa16.96■□□□□ 0.31
PTPN13-205ENST00000502971 FAM209BQ5JX69 171 aa16.96■□□□□ 0.31
PTPN13-205ENST00000502971 NDUFA4O00483 81 aa16.96■□□□□ 0.3
PTPN13-205ENST00000502971 FOSL1P15407 271 aa16.96■□□□□ 0.3
PTPN13-205ENST00000502971 KRTAP1-1Q07627 177 aa16.96■□□□□ 0.3
PTPN13-205ENST00000502971 TMEM86BQ8N661 226 aa16.96■□□□□ 0.3
PTPN13-205ENST00000502971 SIGLECL1Q8N7X8 197 aa16.96■□□□□ 0.3
PTPN13-205ENST00000502971 OR4X2Q8NGF9 303 aa16.96■□□□□ 0.3
PTPN13-205ENST00000502971 ZNF702PQ9H963 129 aa16.96■□□□□ 0.3
PTPN13-205ENST00000502971 CELSR1Q9NYQ6 3014 aa16.95■□□□□ 0.3
PTPN13-205ENST00000502971 TRBV6-1A0A0K0K1D8 114 aa16.95■□□□□ 0.3
PTPN13-205ENST00000502971 SMAD5-AS1Q9Y6J3 95 aa16.95■□□□□ 0.3
PTPN13-205ENST00000502971 U3KQE9 123 aa16.95■□□□□ 0.3
PTPN13-205ENST00000502971 ZFHX3Q15911 3703 aa16.95■□□□□ 0.3
PTPN13-205ENST00000502971 IGHV3-11P01762 117 aa16.94■□□□□ 0.3
PTPN13-205ENST00000502971 ZFP82Q8N141 532 aa16.94■□□□□ 0.3
PTPN13-205ENST00000502971 ARL6IP6Q8N6S5 226 aa16.94■□□□□ 0.3
PTPN13-205ENST00000502971 IL36BQ9NZH7 164 aa16.94■□□□□ 0.3
PTPN13-205ENST00000502971 V9GYV3 84 aa16.94■□□□□ 0.3
PTPN13-205ENST00000502971 A0A087X0K7 114 aa16.93■□□□□ 0.3
PTPN13-205ENST00000502971 A0A1W2PPQ1 181 aa16.93■□□□□ 0.3
PTPN13-205ENST00000502971 K7EQM0 130 aa16.93■□□□□ 0.3
PTPN13-205ENST00000502971 LTAP01374 205 aa16.93■□□□□ 0.3
PTPN13-205ENST00000502971 TRBV12-3P01733 135 aa16.93■□□□□ 0.3
PTPN13-205ENST00000502971 SLC35B1P78383 322 aa16.93■□□□□ 0.3
PTPN13-205ENST00000502971 IBA57Q5T440 356 aaKnown RBP16.93■□□□□ 0.3
PTPN13-205ENST00000502971 GOLT1AQ6ZVE7 132 aa16.93■□□□□ 0.3
PTPN13-205ENST00000502971 IL17RELQ6ZVW7 336 aa16.93■□□□□ 0.3
PTPN13-205ENST00000502971 FAM231DQ6ZW35 169 aa16.93■□□□□ 0.3
PTPN13-205ENST00000502971 TMEM75Q8N9X5 138 aa16.93■□□□□ 0.3
PTPN13-205ENST00000502971 SRD5A3Q9H8P0 318 aa16.93■□□□□ 0.3
PTPN13-205ENST00000502971 TRAV9-1A0A075B6T8 112 aa16.92■□□□□ 0.3
PTPN13-205ENST00000502971 SERTM2A0A1B0GWG4 89 aa16.92■□□□□ 0.3
PTPN13-205ENST00000502971 FAM3BP58499 235 aaPredicted RBP16.92■□□□□ 0.3
PTPN13-205ENST00000502971 NHLRC2Q8NBF2 726 aa16.92■□□□□ 0.3
PTPN13-205ENST00000502971 MLST8Q9BVC4 326 aa16.92■□□□□ 0.3
PTPN13-205ENST00000502971 RNASE7Q9H1E1 156 aaKnown RBP16.92■□□□□ 0.3
PTPN13-205ENST00000502971 BIN3Q9NQY0 253 aa16.92■□□□□ 0.3
PTPN13-205ENST00000502971 TMEM160Q9NX00 188 aa16.92■□□□□ 0.3
PTPN13-205ENST00000502971 ACANP16112 2415 aa16.91■□□□□ 0.3
PTPN13-205ENST00000502971 ZNF785A8K8V0 405 aa16.91■□□□□ 0.3
PTPN13-205ENST00000502971 DIRC3C9JPN6 131 aa16.91■□□□□ 0.3
PTPN13-205ENST00000502971 TYMSP04818 313 aa16.91■□□□□ 0.3
PTPN13-205ENST00000502971 CSN1S1P47710 185 aa16.91■□□□□ 0.3
PTPN13-205ENST00000502971 LCNL1Q6ZST4 164 aa16.91■□□□□ 0.3
PTPN13-205ENST00000502971 Q8N2B8 174 aa16.91■□□□□ 0.3
PTPN13-205ENST00000502971 MEOX2P50222 304 aa16.9■□□□□ 0.3
PTPN13-205ENST00000502971 SGK494Q96LW2 274 aa16.9■□□□□ 0.3
PTPN13-205ENST00000502971 PEF1Q9UBV8 284 aaKnown RBP16.9■□□□□ 0.3
PTPN13-205ENST00000502971 IGLV2-11P01706 119 aa16.9■□□□□ 0.3
PTPN13-205ENST00000502971 APOHP02749 345 aaPredicted RBP16.9■□□□□ 0.3
PTPN13-205ENST00000502971 ELANEP08246 267 aa16.9■□□□□ 0.3
PTPN13-205ENST00000502971 FOXE3Q13461 319 aa16.9■□□□□ 0.3
PTPN13-205ENST00000502971 RPEL1Q2QD12 228 aa16.9■□□□□ 0.3
PTPN13-205ENST00000502971 Q86TA4 180 aa16.9■□□□□ 0.3
PTPN13-205ENST00000502971 YAE1D1Q9NRH1 226 aa16.9■□□□□ 0.3
PTPN13-205ENST00000502971 TLN2Q9Y4G6 2542 aa16.9■□□□□ 0.3
PTPN13-205ENST00000502971 ZNF207O43670 478 aaKnown RBP16.89■□□□□ 0.29
PTPN13-205ENST00000502971 ZNF331Q9NQX6 463 aaPredicted RBP16.89■□□□□ 0.29
PTPN13-205ENST00000502971 TRGC2P03986 189 aa16.88■□□□□ 0.29
PTPN13-205ENST00000502971 PSG3Q16557 428 aa16.88■□□□□ 0.29
PTPN13-205ENST00000502971 C16orf54Q6UWD8 224 aa16.88■□□□□ 0.29
PTPN13-205ENST00000502971 UNQ9165/PRO28630Q6UXU0 137 aa16.88■□□□□ 0.29
PTPN13-205ENST00000502971 TMEM183AQ8IXX5 376 aa16.88■□□□□ 0.29
PTPN13-205ENST00000502971 M0R3E3 92 aa16.87■□□□□ 0.29
PTPN13-205ENST00000502971 SLC50A1Q9BRV3 221 aa16.87■□□□□ 0.29
PTPN13-205ENST00000502971 ZFP30Q9Y2G7 519 aa16.87■□□□□ 0.29
PTPN13-205ENST00000502971 TRAV8-1A0A0A6YYK1 113 aa16.87■□□□□ 0.29
PTPN13-205ENST00000502971 IGHV3-66A0A0C4DH42 116 aa16.87■□□□□ 0.29
PTPN13-205ENST00000502971 ZNF320A2RRD8 509 aa16.87■□□□□ 0.29
PTPN13-205ENST00000502971 ZNF705GA8MUZ8 300 aaPredicted RBP16.87■□□□□ 0.29
PTPN13-205ENST00000502971 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.87■□□□□ 0.29
PTPN13-205ENST00000502971 PRNTQ86SH4 94 aa16.87■□□□□ 0.29
PTPN13-205ENST00000502971 SERTAD4Q9NUC0 356 aa16.87■□□□□ 0.29
PTPN13-205ENST00000502971 ZNF492Q9P255 531 aa16.87■□□□□ 0.29
PTPN13-205ENST00000502971 FBLL1A6NHQ2 334 aaKnown RBP16.86■□□□□ 0.29
PTPN13-205ENST00000502971 GATCO43716 136 aaKnown RBP16.86■□□□□ 0.29
PTPN13-205ENST00000502971 S100A6P06703 90 aa16.86■□□□□ 0.29
PTPN13-205ENST00000502971 C10orf99Q6UWK7 81 aa16.86■□□□□ 0.29
PTPN13-205ENST00000502971 NUDT10Q8NFP7 164 aa16.86■□□□□ 0.29
PTPN13-205ENST00000502971 NUDT11Q96G61 164 aa16.86■□□□□ 0.29
PTPN13-205ENST00000502971 PSG8Q9UQ74 426 aa16.86■□□□□ 0.29
PTPN13-205ENST00000502971 IGHV3OR16-13A0A075B7E8 117 aa16.85■□□□□ 0.29
PTPN13-205ENST00000502971 IGHV3-49A0A0A0MS15 119 aa16.85■□□□□ 0.29
PTPN13-205ENST00000502971 IGHV3-74A0A0B4J1X5 117 aa16.85■□□□□ 0.29
PTPN13-205ENST00000502971 RNF152Q8N8N0 203 aa16.85■□□□□ 0.29
PTPN13-205ENST00000502971 MYOZ3Q8TDC0 251 aa16.85■□□□□ 0.29
PTPN13-205ENST00000502971 GLMPQ8WWB7 406 aa16.85■□□□□ 0.29
PTPN13-205ENST00000502971 GRAMD2BQ96HH9 432 aa16.85■□□□□ 0.29
PTPN13-205ENST00000502971 DUX5Q96PT3 197 aa16.85■□□□□ 0.29
PTPN13-205ENST00000502971 A0A1W2PS18 150 aa16.84■□□□□ 0.29
PTPN13-205ENST00000502971 SCGB2A2Q13296 93 aa16.84■□□□□ 0.29
PTPN13-205ENST00000502971 PRR27Q6MZM9 219 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms