RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, human

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNC-208	ENST00000498724	LHFPL4	Q7Z7J7	247 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	CIART	Q8N365	385 aa	Predicted RBP	3.55	□□□□□ -1.84
TNC-208	ENST00000498724	RPRML	Q8N4K4	120 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	LINC00311	Q8N616	119 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	C8orf31	Q8N9H6	132 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	FER1L6-AS1	Q8NA97	138 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	OR4X2	Q8NGF9	303 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	OR8A1	Q8NGG7	326 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	OR1N2	Q8NGR9	330 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	C8orf46	Q8TAG6	207 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	SRSF12	Q8WXF0	261 aa	Known RBP	3.55	□□□□□ -1.84
TNC-208	ENST00000498724	DPF1	Q92782	380 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	TMEM186	Q96B77	213 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	CCDC140	Q96MF4	163 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	ZNF747	Q9BV97	191 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	MEGF9	Q9H1U4	602 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	TMEM14C	Q9P0S9	112 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	NAV2	Q8IVL1	2488 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	RELN	P78509	3460 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	TRAV8-1	A0A0A6YYK1	113 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	IGHV3-21	A0A0B4J1V1	117 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	SERTM2	A0A1B0GWG4	89 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	MBD3L4	A6NDZ8	208 aa	Predicted RBP	3.54	□□□□□ -1.84
TNC-208	ENST00000498724	MBD3L3	A6NE82	208 aa	Predicted RBP	3.54	□□□□□ -1.84
TNC-208	ENST00000498724	MBD3L5	A6NJ08	208 aa	Predicted RBP	3.54	□□□□□ -1.84
TNC-208	ENST00000498724	PPIAL4D	F5H284	164 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724		H3BS24	57 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	SNAI2	O43623	268 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	NDUFB3	O43676	98 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	NCR2	O95944	276 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	ARMS2	P0C7Q2	107 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	CT45A10	P0DMU9	189 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	TNFRSF1A	P19438	455 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	LGALS7	P47929	136 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	RIPPLY3	P57055	190 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	PLP1	P60201	277 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	PAX2	Q02962	417 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	KIR3DS1	Q14943	382 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	LGALS9B	Q3B8N2	356 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	TMEM200B	Q69YZ2	307 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	LGALS9C	Q6DKI2	356 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	PVRIG	Q6DKI7	326 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	UFSP1	Q6NVU6	142 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	TMEM75	Q8N9X5	138 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	TEX45	Q8NA69	505 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	OR9G4	Q8NGQ1	327 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	3.54	□□□□□ -1.84
TNC-208	ENST00000498724	NEU4	Q8WWR8	484 aa	Predicted RBP	3.54	□□□□□ -1.84
TNC-208	ENST00000498724	ZC2HC1A	Q96GY0	325 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	ZNF414	Q96IQ9	312 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	JMJD8	Q96S16	334 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	TPPP3	Q9BW30	176 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	CSTL1	Q9H114	145 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	THYN1	Q9P016	225 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	PSG8	Q9UQ74	426 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	HILPDA	Q9Y5L2	63 aa		3.54	□□□□□ -1.84
TNC-208	ENST00000498724	SPTA1	P02549	2419 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	ICE1	Q9Y2F5	2266 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	RAI1	Q7Z5J4	1906 aa	Predicted RBP	3.53	□□□□□ -1.84
TNC-208	ENST00000498724		A0A0G2JLM5	398 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	LOC389332	A0A1B0GUA5	103 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	TMEM189	A5PLL7	270 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724		H3BUT2	72 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	SIVA1	O15304	175 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	SAP30	O75446	220 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	IGLV2-11	P01706	119 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	HBD	P02042	147 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	RBP4	P02753	201 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	FGF6	P10767	208 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	S100A7	P31151	101 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	APOBEC3A	P31941	199 aa	Predicted RBP	3.53	□□□□□ -1.84
TNC-208	ENST00000498724	CACNG7	P62955	275 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	DIAPH2-AS1	Q14236	149 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	PRR30	Q53SZ7	412 aa	Predicted RBP	3.53	□□□□□ -1.84
TNC-208	ENST00000498724	C1orf185	Q5T7R7	199 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	ZNF474	Q6S9Z5	364 aa	Predicted RBP	3.53	□□□□□ -1.84
TNC-208	ENST00000498724	SEM1	Q6ZVN7	128 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	BOD1L2	Q8IYS8	172 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	EXOC3-AS1	Q8N2X6	119 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	ZADH2	Q8N4Q0	377 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	TMEM116	Q8NCL8	245 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	FDCSP	Q8NFU4	85 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	OR5A1	Q8NGJ0	315 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	OR2K2	Q8NGT1	345 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	PRELID3A	Q96N28	172 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	RASL11B	Q9BPW5	248 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	SHANK2-AS3	Q9BTD1	123 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.53	□□□□□ -1.84
TNC-208	ENST00000498724	NGB	Q9NPG2	151 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	SIGLEC8	Q9NYZ4	499 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	JKAMP	Q9P055	326 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	RABAC1	Q9UI14	185 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	F11R	Q9Y624	299 aa	Known RBP	3.53	□□□□□ -1.84
TNC-208	ENST00000498724	SPCS1	Q9Y6A9	102 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724		U3KQK5	164 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	MED13	Q9UHV7	2174 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	UTP20	O75691	2785 aa	Known RBP	3.53	□□□□□ -1.84
TNC-208	ENST00000498724	NBAS	A2RRP1	2371 aa		3.53	□□□□□ -1.84
TNC-208	ENST00000498724	TANC2	Q9HCD6	1990 aa		3.52	□□□□□ -1.85
TNC-208	ENST00000498724	UBR5	O95071	2799 aa	Predicted RBP	3.52	□□□□□ -1.85

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