RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ZNF738Q8NE65 137 aa9.31□□□□□ -0.92
HSPG2-213ENST00000498495 SCGB1C1Q8TD33 95 aa9.31□□□□□ -0.92
HSPG2-213ENST00000498495 ATP5SQ99766 215 aa9.31□□□□□ -0.92
HSPG2-213ENST00000498495 SMIM3Q9BZL3 60 aa9.31□□□□□ -0.92
HSPG2-213ENST00000498495 CXorf65A6NEN9 183 aa9.3□□□□□ -0.92
HSPG2-213ENST00000498495 ZNF705EA8MWA4 302 aaPredicted RBP9.3□□□□□ -0.92
HSPG2-213ENST00000498495 DEFB4AO15263 64 aa9.3□□□□□ -0.92
HSPG2-213ENST00000498495 IFNA5P01569 189 aa9.3□□□□□ -0.92
HSPG2-213ENST00000498495 MIFP14174 115 aa9.3□□□□□ -0.92
HSPG2-213ENST00000498495 CXCL2P19875 107 aa9.3□□□□□ -0.92
HSPG2-213ENST00000498495 OR11H7Q8NGC8 314 aa9.3□□□□□ -0.92
HSPG2-213ENST00000498495 SLC50A1Q9BRV3 221 aa9.3□□□□□ -0.92
HSPG2-213ENST00000498495 SLC35B3Q9H1N7 401 aa9.3□□□□□ -0.92
HSPG2-213ENST00000498495 HRH4Q9H3N8 390 aa9.3□□□□□ -0.92
HSPG2-213ENST00000498495 KCNIP2Q9NS61 270 aa9.3□□□□□ -0.92
HSPG2-213ENST00000498495 STAB2Q8WWQ8 2551 aa9.29□□□□□ -0.92
HSPG2-213ENST00000498495 H3BTX0 84 aa9.29□□□□□ -0.92
HSPG2-213ENST00000498495 ZNF705DP0CH99 300 aaPredicted RBP9.29□□□□□ -0.92
HSPG2-213ENST00000498495 ZNF705BP0CI00 300 aaPredicted RBP9.29□□□□□ -0.92
HSPG2-213ENST00000498495 HLA-DMBP28068 263 aa9.29□□□□□ -0.92
HSPG2-213ENST00000498495 CNN1P51911 297 aaKnown RBP9.29□□□□□ -0.92
HSPG2-213ENST00000498495 PMS2P11Q13670 270 aa9.29□□□□□ -0.92
HSPG2-213ENST00000498495 GUK1Q16774 197 aa9.29□□□□□ -0.92
HSPG2-213ENST00000498495 C11orf45Q8TAV5 145 aa9.29□□□□□ -0.92
HSPG2-213ENST00000498495 MFFQ9GZY8 342 aa9.29□□□□□ -0.92
HSPG2-213ENST00000498495 C11orf68Q9H3H3 251 aaKnown RBP9.29□□□□□ -0.92
HSPG2-213ENST00000498495 ZNF331Q9NQX6 463 aaPredicted RBP9.29□□□□□ -0.92
HSPG2-213ENST00000498495 X6R8D5 127 aa9.29□□□□□ -0.92
HSPG2-213ENST00000498495 IGHV3OR16-12A0A075B7B8 117 aa9.28□□□□□ -0.92
HSPG2-213ENST00000498495 IGHV4-28A0A0C4DH34 117 aa9.28□□□□□ -0.92
HSPG2-213ENST00000498495 H3BQ15 152 aa9.28□□□□□ -0.92
HSPG2-213ENST00000498495 IGLC2P0DOY2 106 aa9.28□□□□□ -0.92
HSPG2-213ENST00000498495 GCSAMLQ5JQS6 135 aa9.28□□□□□ -0.92
HSPG2-213ENST00000498495 Q8NAQ8 132 aa9.28□□□□□ -0.92
HSPG2-213ENST00000498495 RPUSD4Q96CM3 377 aaKnown RBP9.28□□□□□ -0.92
HSPG2-213ENST00000498495 PPP1R14DQ9NXH3 145 aa9.28□□□□□ -0.92
HSPG2-213ENST00000498495 RBMY1A1P0DJD3 496 aaKnown RBP9.27□□□□□ -0.93
HSPG2-213ENST00000498495 RBMY1CP0DJD4 496 aa9.27□□□□□ -0.93
HSPG2-213ENST00000498495 RHOBP62745 196 aa9.27□□□□□ -0.93
HSPG2-213ENST00000498495 HIST1H1AQ02539 215 aaPredicted RBP9.27□□□□□ -0.93
HSPG2-213ENST00000498495 OXA1LQ15070 435 aa9.27□□□□□ -0.93
HSPG2-213ENST00000498495 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.93
HSPG2-213ENST00000498495 OR8A1Q8NGG7 326 aa9.27□□□□□ -0.93
HSPG2-213ENST00000498495 ASB13Q8WXK3 278 aa9.27□□□□□ -0.93
HSPG2-213ENST00000498495 SAT2Q96F10 170 aaPredicted RBP9.27□□□□□ -0.93
HSPG2-213ENST00000498495 ZNF586Q9NXT0 402 aa9.27□□□□□ -0.93
HSPG2-213ENST00000498495 TMEM14CQ9P0S9 112 aa9.27□□□□□ -0.93
HSPG2-213ENST00000498495 GOLT1BQ9Y3E0 138 aa9.27□□□□□ -0.93
HSPG2-213ENST00000498495 NUPR2A6NF83 97 aa9.26□□□□□ -0.93
HSPG2-213ENST00000498495 SMIM9A6NGZ8 99 aa9.26□□□□□ -0.93
HSPG2-213ENST00000498495 A8MTW9 85 aa9.26□□□□□ -0.93
HSPG2-213ENST00000498495 ZNF705FA8MVS1 300 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-213ENST00000498495 AMBPP02760 352 aa9.26□□□□□ -0.93
HSPG2-213ENST00000498495 GIPP09681 153 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-213ENST00000498495 HIST1H1EP10412 219 aaKnown RBP9.26□□□□□ -0.93
HSPG2-213ENST00000498495 NANOS2P60321 138 aaKnown RBP9.26□□□□□ -0.93
HSPG2-213ENST00000498495 AMTNQ6UX39 209 aa9.26□□□□□ -0.93
HSPG2-213ENST00000498495 ZNF705AQ6ZN79 300 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-213ENST00000498495 NEU1Q99519 415 aa9.26□□□□□ -0.93
HSPG2-213ENST00000498495 MRPL32Q9BYC8 188 aaKnown RBP9.26□□□□□ -0.93
HSPG2-213ENST00000498495 WFDC1Q9HC57 220 aa9.26□□□□□ -0.93
HSPG2-213ENST00000498495 TIMM9Q9Y5J7 89 aa9.26□□□□□ -0.93
HSPG2-213ENST00000498495 SLC17A3O00476 420 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 ZNF253O75346 499 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 PYYP10082 97 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 PRB4P10163 310 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-213ENST00000498495 SPINK13Q1W4C9 94 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 Q5BKY6 102 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 FFAR4Q5NUL3 377 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 CEMP1Q6PRD7 247 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-213ENST00000498495 MIR17HGQ75NE6 70 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 PHLDA1Q8WV24 401 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-213ENST00000498495 BLNKQ8WV28 456 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 IGF2BP2-AS1Q96M15 143 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 TMEM208Q9BTX3 173 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 SLC25A2Q9BXI2 301 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 PARD6GQ9BYG4 376 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-213ENST00000498495 OR51M1Q9H341 326 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 KLK5Q9Y337 293 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-213ENST00000498495 DNAH7Q8WXX0 4024 aa9.25□□□□□ -0.93
HSPG2-213ENST00000498495 TRBV19A0A075B6N1 114 aa9.24□□□□□ -0.93
HSPG2-213ENST00000498495 M0R2Z0 102 aa9.24□□□□□ -0.93
HSPG2-213ENST00000498495 C1orf158Q8N1D5 194 aa9.24□□□□□ -0.93
HSPG2-213ENST00000498495 INO80EQ8NBZ0 244 aaPredicted RBP9.24□□□□□ -0.93
HSPG2-213ENST00000498495 OR10J6PQ8NGY7 276 aa9.24□□□□□ -0.93
HSPG2-213ENST00000498495 AQP10Q96PS8 301 aa9.24□□□□□ -0.93
HSPG2-213ENST00000498495 FUT9Q9Y231 359 aa9.24□□□□□ -0.93
HSPG2-213ENST00000498495 PRAC2D3DTV9 90 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 BOLA2-SMG1P6H3BVE0 249 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 JTBO76095 146 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 HBE1P02100 147 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 NBEAP1P0C6P0 100 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 PDE6HQ13956 83 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 ZNF266Q14584 549 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 OR2T35Q8NGX2 323 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 FAM167A-AS1Q96KT0 104 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 PAXXQ9BUH6 204 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 AAMDCQ9H7C9 122 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 PRELID1Q9Y255 219 aa9.23□□□□□ -0.93
HSPG2-213ENST00000498495 RFNGQ9Y644 331 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms