RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	CRIP2	P52943	208 aa	Predicted RBP	4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SCGB2A2	Q13296	93 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	KIAA0141	Q14154	515 aa	Predicted RBP	4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ECSCR	Q19T08	205 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	KLK9	Q2XQG4	91 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325		Q56UQ5	140 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SOHLH1	Q5JUK2	328 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ASPHD1	Q5U4P2	390 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	C10orf113	Q5VZT2	155 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PQLC2	Q6ZP29	291 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	STXBP6	Q8NFX7	210 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	VN1R17P	Q8TDU5	208 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325		Q8WTZ3	238 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	HSPB9	Q9BQS6	159 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SCRT1	Q9BWW7	348 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TMEM167B	Q9NRX6	74 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	C21orf62	Q9NYP8	219 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	FAM30A	Q9NZY2	134 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	KLK9	Q9UKQ9	250 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	RNF24	Q9Y225	148 aa		4.12	□□□□□ -1.75
HMGXB4-208	ENST00000498325	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TRBV9	A0A0B4J1U6	114 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	FAM223B	A6NKX1	122 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325		C9JQL5	133 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TSTD3	H0UI37	97 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325		H3BUA1	57 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PPP1R2P9	O14990	202 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	HMGB3	O15347	200 aa	Known RBP	4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	HYPM	O75409	117 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR2J3	O76001	311 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	NDUFB8	O95169	186 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	BRI3	O95415	125 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TOMM40	O96008	361 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	AMY1A	P04745	511 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IGF1	P05019	195 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SRP19	P09132	144 aa	Known RBP	4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR5G3	P0C626	314 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IGLC1	P0CG04	106 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	RD3L	P0DJH9	198 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PSG1	P11464	419 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ORM2	P19652	201 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SRP14	P37108	136 aa	Known RBP	4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PLP1	P60201	277 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	YPEL3	P61236	119 aa	Predicted RBP	4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PKIA	P61925	76 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	NDP	Q00604	133 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MEF2B	Q02080	365 aa	Predicted RBP	4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ZNF90	Q03938	601 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ATP5G2	Q06055	141 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PNRC1	Q12796	327 aa	Predicted RBP	4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	GCSAML	Q5JQS6	135 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	C19orf35	Q6ZS72	473 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MIR17HG	Q75NE6	70 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SSX7	Q7RTT5	188 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	FAM223A	Q8IWN6	122 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	FAM24B	Q8N5W8	94 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	NECAP1	Q8NC96	275 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR51G1	Q8NGK1	321 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	EEF1AKMT3	Q96AZ1	226 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	YPEL4	Q96NS1	127 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	UHRF2	Q96PU4	802 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ATP6V0B	Q99437	205 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	RARRES2	Q99969	163 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PRSS22	Q9GZN4	317 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SEPSECS	Q9HD40	501 aa	Known RBP	4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TMEM242	Q9NWH2	141 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MRPL36	Q9P0J6	103 aa	Known RBP	4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	HIGD1A	Q9Y241	93 aa		4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SOX21	Q9Y651	276 aa	Predicted RBP	4.11	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TNC	P24821	2201 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SACS	Q9NZJ4	4579 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TRBV7-1	A0A0A6YYK4	115 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	MDFIC2	A0A1B0GVS7	189 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SH2D7	A6NKC9	451 aa	Predicted RBP	4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325		F6UZH7	168 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325		G3V318	75 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TMEM250	H0YL14	139 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PDE6D	O43924	150 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR7C2	O60412	319 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PAGE4	O60829	102 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	IGHV4-59	P01825	116 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	ARL14EPL	P0DKL9	152 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	GCHFR	P30047	84 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	RPS10	P46783	165 aa	Known RBP	4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	CEBPG	P53567	150 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	LYZ	P61626	148 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	RHOG	P84095	191 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TIGIT	Q495A1	244 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SPATA31B1P	Q5VZV4	182 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	CST9LP1	Q5W188	147 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	SUMO4	Q6EEV6	95 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	PATE2	Q6UY27	113 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	LINC00305	Q7Z4B0	112 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TMEM86B	Q8N661	226 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	OR1B1	Q8NGR6	318 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TMEM37	Q8WXS4	190 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	TVP23C	Q96ET8	276 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	USMG5	Q96IX5	58 aa		4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	NOL4L	Q96MY1	436 aa	Predicted RBP	4.1	□□□□□ -1.75
HMGXB4-208	ENST00000498325	CTDSP1	Q9GZU7	261 aa		4.1	□□□□□ -1.75

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