RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 RPL11P62913 178 aaKnown RBP6.5□□□□□ -1.37
SF3A1-210ENST00000498259 PAFAH1B2P68402 229 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 ADIRFQ15847 76 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 TMEM183BQ1AE95 376 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 C16orf54Q6UWD8 224 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 MRPL53Q96EL3 112 aaKnown RBP6.5□□□□□ -1.37
SF3A1-210ENST00000498259 OR5B12Q96R08 314 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 SMR3AQ99954 134 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 ESM1Q9NQ30 184 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 ZNF586Q9NXT0 402 aa6.5□□□□□ -1.37
SF3A1-210ENST00000498259 TSSC4Q9Y5U2 329 aaPredicted RBP6.5□□□□□ -1.37
SF3A1-210ENST00000498259 FLNAP21333 2647 aaKnown RBP6.49□□□□□ -1.37
SF3A1-210ENST00000498259 TRBV6-1A0A0K0K1D8 114 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 CLPSL1A2RUU4 121 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 A8MWP6 167 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 INAFM1C9JVW0 142 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 TSPAN4O14817 238 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 TCRAP04437 139 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 BTN1A1Q13410 526 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 SAPCD1Q5SSQ6 148 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 KCNIP4Q6PIL6 250 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 OR1N2Q8NGR9 330 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 LINC01006Q8NI28 216 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 NDFIP1Q9BT67 221 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 SMPXQ9UHP9 88 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 ZFP30Q9Y2G7 519 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 KLF12Q9Y4X4 402 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 RNF114Q9Y508 228 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 HIVEP2P31629 2446 aa6.49□□□□□ -1.37
SF3A1-210ENST00000498259 CELSR1Q9NYQ6 3014 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 ZANQ9Y493 2812 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 MRPS12O15235 138 aaKnown RBP6.48□□□□□ -1.37
SF3A1-210ENST00000498259 TRBV12-3P01733 135 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 HOXD3P31249 432 aaPredicted RBP6.48□□□□□ -1.37
SF3A1-210ENST00000498259 RPL23P62829 140 aaKnown RBP6.48□□□□□ -1.37
SF3A1-210ENST00000498259 CENPWQ5EE01 88 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 LINC01551Q86U37 167 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 BAGE2Q86Y30 109 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 TMEM75Q8N9X5 138 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 KLHL30-AS1Q8NEE0 82 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 C2CD4CQ8TF44 421 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 DAZAP1Q96EP5 407 aaKnown RBP6.48□□□□□ -1.37
SF3A1-210ENST00000498259 C16orf92Q96LL3 132 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 IMMP2LQ96T52 175 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 RHPN1-AS1Q9BWJ2 59 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 NRN1Q9NPD7 142 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 ZNF331Q9NQX6 463 aaPredicted RBP6.48□□□□□ -1.37
SF3A1-210ENST00000498259 MLXQ9UH92 298 aa6.48□□□□□ -1.37
SF3A1-210ENST00000498259 IGHV3OR16-8A0A075B7F1 116 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 RBAKDNA6NC62 111 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 H7BYZ3 331 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 ISLRO14498 428 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 CHEK1O14757 476 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 ZNF207O43670 478 aaKnown RBP6.47□□□□□ -1.37
SF3A1-210ENST00000498259 CT45A10P0DMU9 189 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 ERVFC1-1P60608 527 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 SNRPD3P62318 126 aaKnown RBP6.47□□□□□ -1.37
SF3A1-210ENST00000498259 FOXL1Q12952 345 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 KLF5Q13887 457 aaPredicted RBP6.47□□□□□ -1.37
SF3A1-210ENST00000498259 UNQ9165/PRO28630Q6UXU0 137 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 LCNL1Q6ZST4 164 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 EXOC3-AS1Q8N2X6 119 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 OR11H1Q8NG94 326 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 GLMPQ8WWB7 406 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 SFRP2Q96HF1 295 aa6.47□□□□□ -1.37
SF3A1-210ENST00000498259 IGHV4OR15-8A0A075B7B6 117 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 A0A087WW49 117 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 DIRC3C9JPN6 131 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 DNASE2O00115 360 aaPredicted RBP6.46□□□□□ -1.38
SF3A1-210ENST00000498259 OVOL1O14753 267 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 MGST1P10620 155 aaKnown RBP6.46□□□□□ -1.38
SF3A1-210ENST00000498259 CBLN1P23435 193 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 SYNJ2BPP57105 145 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 FLI1Q01543 452 aaPredicted RBP6.46□□□□□ -1.38
SF3A1-210ENST00000498259 PSG3Q16557 428 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 LCN12Q6JVE5 192 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 C10orf99Q6UWK7 81 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 C8orf86Q6ZUL3 223 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 GOLT1AQ6ZVE7 132 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 OR10G8Q8NGN5 311 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 OCC1Q8TAD7 63 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 ISOC2Q96AB3 205 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 RPH3ALQ9UNE2 315 aa6.46□□□□□ -1.38
SF3A1-210ENST00000498259 NOTCH2Q04721 2471 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 TRAV9-1A0A075B6T8 112 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 TRAV2A0A0B4J234 112 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 IGHV3-66A0A0C4DH42 116 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 H3BTX0 84 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 GCGP01275 180 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 LTAP01374 205 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 CMC4P56277 68 aaPredicted RBP6.45□□□□□ -1.38
SF3A1-210ENST00000498259 RNF212Q495C1 297 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 TM4SF20Q53R12 229 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 IBA57Q5T440 356 aaKnown RBP6.45□□□□□ -1.38
SF3A1-210ENST00000498259 TMEM78Q5T7P6 136 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 ATRAIDQ6UW56 229 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.45□□□□□ -1.38
SF3A1-210ENST00000498259 RBPMS2Q6ZRY4 209 aaKnown RBP6.45□□□□□ -1.38
SF3A1-210ENST00000498259 Q71RC1 249 aaPredicted RBP6.45□□□□□ -1.38
SF3A1-210ENST00000498259 TCF24Q7RTU0 167 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms