RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 H3BMM0 161 aa7.65□□□□□ -1.18
PTPRN-218ENST00000497977 H3BRN7 92 aa7.65□□□□□ -1.18
PTPRN-218ENST00000497977 EIF3GO75821 320 aaKnown RBP eCLIP7.65□□□□□ -1.18
PTPRN-218ENST00000497977 ATP6V0CP27449 155 aa7.65□□□□□ -1.18
PTPRN-218ENST00000497977 PRR20EP86478 221 aa7.65□□□□□ -1.18
PTPRN-218ENST00000497977 PRR20CP86479 221 aa7.65□□□□□ -1.18
PTPRN-218ENST00000497977 PRR20DP86480 221 aa7.65□□□□□ -1.18
PTPRN-218ENST00000497977 PRR20BP86481 221 aa7.65□□□□□ -1.18
PTPRN-218ENST00000497977 PRR20AP86496 221 aa7.65□□□□□ -1.18
PTPRN-218ENST00000497977 TRPT1Q86TN4 253 aaKnown RBP7.65□□□□□ -1.18
PTPRN-218ENST00000497977 C9orf62Q8N4C0 152 aa7.65□□□□□ -1.18
PTPRN-218ENST00000497977 OR11H2Q8NH07 326 aa7.65□□□□□ -1.18
PTPRN-218ENST00000497977 SLC50A1Q9BRV3 221 aa7.65□□□□□ -1.18
PTPRN-218ENST00000497977 KNCNA6PVL3 124 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 TAAR5O14804 337 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 HLA-DRB4P13762 266 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 MIFP14174 115 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 RAB2AP61019 212 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 PSG9Q00887 426 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 CASC10Q5T4H9 136 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 MORN5Q5VZ52 161 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 FAM122CQ6P4D5 195 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 LCN15Q6UWW0 184 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 OR4B1Q8NGF8 309 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 PARD6GQ9BYG4 376 aaPredicted RBP7.64□□□□□ -1.19
PTPRN-218ENST00000497977 SLC25A32Q9H2D1 315 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 SAV1Q9H4B6 383 aaPredicted RBP7.64□□□□□ -1.19
PTPRN-218ENST00000497977 CYTL1Q9NRR1 136 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 KLK5Q9Y337 293 aaPredicted RBP7.64□□□□□ -1.19
PTPRN-218ENST00000497977 HLA-DRB4X5D2U9 266 aa7.64□□□□□ -1.19
PTPRN-218ENST00000497977 A0A087X0K7 114 aa7.63□□□□□ -1.19
PTPRN-218ENST00000497977 SMIM9A6NGZ8 99 aa7.63□□□□□ -1.19
PTPRN-218ENST00000497977 SNRPCP09234 159 aaKnown RBP7.63□□□□□ -1.19
PTPRN-218ENST00000497977 ZNF124Q15973 351 aa7.63□□□□□ -1.19
PTPRN-218ENST00000497977 LGALSLQ3ZCW2 172 aaPredicted RBP7.63□□□□□ -1.19
PTPRN-218ENST00000497977 PATE2Q6UY27 113 aa7.63□□□□□ -1.19
PTPRN-218ENST00000497977 FAM24BQ8N5W8 94 aa7.63□□□□□ -1.19
PTPRN-218ENST00000497977 TMEM37Q8WXS4 190 aa7.63□□□□□ -1.19
PTPRN-218ENST00000497977 RETNQ9HD89 108 aa7.63□□□□□ -1.19
PTPRN-218ENST00000497977 GOLT1BQ9Y3E0 138 aa7.63□□□□□ -1.19
PTPRN-218ENST00000497977 TIMM9Q9Y5J7 89 aa7.63□□□□□ -1.19
PTPRN-218ENST00000497977 SORL1Q92673 2214 aa7.63□□□□□ -1.19
PTPRN-218ENST00000497977 TRAV5A0A0B4J249 113 aa7.62□□□□□ -1.19
PTPRN-218ENST00000497977 TMEM189A5PLL7 270 aa7.62□□□□□ -1.19
PTPRN-218ENST00000497977 H3BTX0 84 aa7.62□□□□□ -1.19
PTPRN-218ENST00000497977 JTBO76095 146 aa7.62□□□□□ -1.19
PTPRN-218ENST00000497977 TPT1P13693 172 aaKnown RBP7.62□□□□□ -1.19
PTPRN-218ENST00000497977 FAM78BQ5VT40 261 aa7.62□□□□□ -1.19
PTPRN-218ENST00000497977 MIR17HGQ75NE6 70 aa7.62□□□□□ -1.19
PTPRN-218ENST00000497977 ZNF738Q8NE65 137 aa7.62□□□□□ -1.19
PTPRN-218ENST00000497977 OR2G3Q8NGZ4 309 aa7.62□□□□□ -1.19
PTPRN-218ENST00000497977 GNPNAT1Q96EK6 184 aaPredicted RBP7.62□□□□□ -1.19
PTPRN-218ENST00000497977 HRH4Q9H3N8 390 aa7.62□□□□□ -1.19
PTPRN-218ENST00000497977 BOLA1Q9Y3E2 137 aa7.62□□□□□ -1.19
PTPRN-218ENST00000497977 A0A0J9YWU9 116 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 CXorf65A6NEN9 183 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 NUPR2A6NF83 97 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 HMGB3O15347 200 aaKnown RBP7.61□□□□□ -1.19
PTPRN-218ENST00000497977 CDC34P49427 236 aaPredicted RBP7.61□□□□□ -1.19
PTPRN-218ENST00000497977 TAS2R45P59539 299 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 RHOBP62745 196 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 PSG3Q16557 428 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 ACOT6Q3I5F7 207 aaPredicted RBP7.61□□□□□ -1.19
PTPRN-218ENST00000497977 AKR1C8PQ5T2L2 129 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 OR10J6PQ8NGY7 276 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 C11orf45Q8TAV5 145 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 TMED6Q8WW62 240 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 PSMG3Q9BT73 122 aaPredicted RBP7.61□□□□□ -1.19
PTPRN-218ENST00000497977 TMEM208Q9BTX3 173 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
PTPRN-218ENST00000497977 AAMDCQ9H7C9 122 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 PRELID1Q9Y255 219 aa7.61□□□□□ -1.19
PTPRN-218ENST00000497977 A0A0J9YX75 114 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 TEX48A0A1B0GUV7 120 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 A0A1W2PPV4 95 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 SOCS3O14543 225 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 OR7C2O60412 319 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 ZNF253O75346 499 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 PYYP10082 97 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 HIST1H1EP10412 219 aaKnown RBP7.6□□□□□ -1.19
PTPRN-218ENST00000497977 M6PRP20645 277 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 C4BPBP20851 252 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 TSPOP30536 169 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 EIF5AP63241 154 aaKnown RBP7.6□□□□□ -1.19
PTPRN-218ENST00000497977 IQCF2Q8IXL9 164 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 OR10G4Q8NGN3 311 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 OR10G9Q8NGN4 311 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 OR10G7Q8NGN6 311 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 SLC25A2Q9BXI2 301 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 MRPL32Q9BYC8 188 aaKnown RBP7.6□□□□□ -1.19
PTPRN-218ENST00000497977 TMEM14CQ9P0S9 112 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 XCL2Q9UBD3 114 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 FUT9Q9Y231 359 aa7.6□□□□□ -1.19
PTPRN-218ENST00000497977 ZNF705EA8MWA4 302 aaPredicted RBP7.59□□□□□ -1.19
PTPRN-218ENST00000497977 C11orf94C9JXX5 98 aa7.59□□□□□ -1.19
PTPRN-218ENST00000497977 IGKV3-20P01619 116 aa7.59□□□□□ -1.19
PTPRN-218ENST00000497977 MBP02144 154 aa7.59□□□□□ -1.19
PTPRN-218ENST00000497977 OR10J4P0C629 311 aa7.59□□□□□ -1.19
PTPRN-218ENST00000497977 PRB4P10163 310 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms