RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RARRES2Q99969 163 aa11.24□□□□□ -0.61
NUP50-219ENST00000497960 PSMG3Q9BT73 122 aaPredicted RBP11.24□□□□□ -0.61
NUP50-219ENST00000497960 ZNF471Q9BX82 626 aaPredicted RBP11.24□□□□□ -0.61
NUP50-219ENST00000497960 SH3BGRL3Q9H299 93 aa11.24□□□□□ -0.61
NUP50-219ENST00000497960 SEPSECSQ9HD40 501 aaKnown RBP11.24□□□□□ -0.61
NUP50-219ENST00000497960 RFNGQ9Y644 331 aa11.24□□□□□ -0.61
NUP50-219ENST00000497960 AGRNO00468 2067 aa11.24□□□□□ -0.61
NUP50-219ENST00000497960 CXorf65A6NEN9 183 aa11.23□□□□□ -0.61
NUP50-219ENST00000497960 KNCNA6PVL3 124 aa11.23□□□□□ -0.61
NUP50-219ENST00000497960 RPL7P18124 248 aaKnown RBP11.23□□□□□ -0.61
NUP50-219ENST00000497960 ACOT6Q3I5F7 207 aaPredicted RBP11.23□□□□□ -0.61
NUP50-219ENST00000497960 TMEM41BQ5BJD5 291 aa11.23□□□□□ -0.61
NUP50-219ENST00000497960 FAM78BQ5VT40 261 aa11.23□□□□□ -0.61
NUP50-219ENST00000497960 MORN5Q5VZ52 161 aa11.23□□□□□ -0.61
NUP50-219ENST00000497960 MORN3Q6PF18 240 aaPredicted RBP11.23□□□□□ -0.61
NUP50-219ENST00000497960 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
NUP50-219ENST00000497960 OR11H2Q8NH07 326 aa11.23□□□□□ -0.61
NUP50-219ENST00000497960 CYTL1Q9NRR1 136 aa11.23□□□□□ -0.61
NUP50-219ENST00000497960 SPP1P10451 314 aa11.22□□□□□ -0.61
NUP50-219ENST00000497960 PMS2P11Q13670 270 aa11.22□□□□□ -0.61
NUP50-219ENST00000497960 BPIFA4PQ86YQ2 179 aa11.22□□□□□ -0.61
NUP50-219ENST00000497960 OR2G3Q8NGZ4 309 aa11.22□□□□□ -0.61
NUP50-219ENST00000497960 MRPL32Q9BYC8 188 aaKnown RBP11.22□□□□□ -0.61
NUP50-219ENST00000497960 M6PRP20645 277 aa11.21□□□□□ -0.61
NUP50-219ENST00000497960 RAB2AP61019 212 aa11.21□□□□□ -0.61
NUP50-219ENST00000497960 EIF5AP63241 154 aaKnown RBP11.21□□□□□ -0.61
NUP50-219ENST00000497960 SPATA31B1PQ5VZV4 182 aa11.21□□□□□ -0.61
NUP50-219ENST00000497960 RYR3Q15413 4870 aa11.2□□□□□ -0.62
NUP50-219ENST00000497960 NUPR2A6NF83 97 aa11.2□□□□□ -0.62
NUP50-219ENST00000497960 C4BPBP20851 252 aa11.2□□□□□ -0.62
NUP50-219ENST00000497960 ID1P41134 155 aa11.2□□□□□ -0.62
NUP50-219ENST00000497960 MEOX2P50222 304 aa11.2□□□□□ -0.62
NUP50-219ENST00000497960 RHOBP62745 196 aa11.2□□□□□ -0.62
NUP50-219ENST00000497960 SERF2P84101 59 aa11.2□□□□□ -0.62
NUP50-219ENST00000497960 LGALSLQ3ZCW2 172 aaPredicted RBP11.2□□□□□ -0.62
NUP50-219ENST00000497960 FAM122CQ6P4D5 195 aa11.2□□□□□ -0.62
NUP50-219ENST00000497960 MIR17HGQ75NE6 70 aa11.2□□□□□ -0.62
NUP50-219ENST00000497960 C9orf62Q8N4C0 152 aa11.2□□□□□ -0.62
NUP50-219ENST00000497960 FUT9Q9Y231 359 aa11.2□□□□□ -0.62
NUP50-219ENST00000497960 TRAV5A0A0B4J249 113 aa11.19□□□□□ -0.62
NUP50-219ENST00000497960 A0A1W2PPV4 95 aa11.19□□□□□ -0.62
NUP50-219ENST00000497960 MBP02144 154 aa11.19□□□□□ -0.62
NUP50-219ENST00000497960 TPT1P13693 172 aaKnown RBP11.19□□□□□ -0.62
NUP50-219ENST00000497960 NKX2-5P52952 324 aaPredicted RBP11.19□□□□□ -0.62
NUP50-219ENST00000497960 NUTF2P61970 127 aaKnown RBP11.19□□□□□ -0.62
NUP50-219ENST00000497960 KHDC3LQ587J8 217 aa11.19□□□□□ -0.62
NUP50-219ENST00000497960 AKR1C8PQ5T2L2 129 aa11.19□□□□□ -0.62
NUP50-219ENST00000497960 OR10G4Q8NGN3 311 aa11.19□□□□□ -0.62
NUP50-219ENST00000497960 OR10G9Q8NGN4 311 aa11.19□□□□□ -0.62
NUP50-219ENST00000497960 OR10G7Q8NGN6 311 aa11.19□□□□□ -0.62
NUP50-219ENST00000497960 SLC25A2Q9BXI2 301 aa11.19□□□□□ -0.62
NUP50-219ENST00000497960 STARD9Q9P2P6 4700 aa11.18□□□□□ -0.62
NUP50-219ENST00000497960 A0A087X0K7 114 aa11.18□□□□□ -0.62
NUP50-219ENST00000497960 OR7C2O60412 319 aa11.18□□□□□ -0.62
NUP50-219ENST00000497960 GIG44P09565 113 aaPredicted RBP11.18□□□□□ -0.62
NUP50-219ENST00000497960 CDC34P49427 236 aaPredicted RBP11.18□□□□□ -0.62
NUP50-219ENST00000497960 TAS2R45P59539 299 aa11.18□□□□□ -0.62
NUP50-219ENST00000497960 SAMD13Q5VXD3 122 aa11.18□□□□□ -0.62
NUP50-219ENST00000497960 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.18□□□□□ -0.62
NUP50-219ENST00000497960 C16orf92Q96LL3 132 aa11.18□□□□□ -0.62
NUP50-219ENST00000497960 LINC00052Q96N35 136 aa11.18□□□□□ -0.62
NUP50-219ENST00000497960 C11orf68Q9H3H3 251 aaKnown RBP11.18□□□□□ -0.62
NUP50-219ENST00000497960 MRPS12O15235 138 aaKnown RBP11.17□□□□□ -0.62
NUP50-219ENST00000497960 SNRPCP09234 159 aaKnown RBP11.17□□□□□ -0.62
NUP50-219ENST00000497960 PYYP10082 97 aa11.17□□□□□ -0.62
NUP50-219ENST00000497960 PSMB3P49720 205 aa11.17□□□□□ -0.62
NUP50-219ENST00000497960 CEMP1Q6PRD7 247 aaPredicted RBP11.17□□□□□ -0.62
NUP50-219ENST00000497960 LCN15Q6UWW0 184 aa11.17□□□□□ -0.62
NUP50-219ENST00000497960 STOML3Q8TAV4 291 aa11.17□□□□□ -0.62
NUP50-219ENST00000497960 C11orf45Q8TAV5 145 aa11.17□□□□□ -0.62
NUP50-219ENST00000497960 LRRC20Q8TCA0 184 aa11.17□□□□□ -0.62
NUP50-219ENST00000497960 KLK5Q9Y337 293 aaPredicted RBP11.17□□□□□ -0.62
NUP50-219ENST00000497960 DYNC2H1Q8NCM8 4307 aaKnown RBP11.16□□□□□ -0.62
NUP50-219ENST00000497960 H3BMM0 161 aa11.16□□□□□ -0.62
NUP50-219ENST00000497960 SOCS3O14543 225 aa11.16□□□□□ -0.62
NUP50-219ENST00000497960 HLA-DRB4P13762 266 aa11.16□□□□□ -0.62
NUP50-219ENST00000497960 UBE2L3P68036 154 aaKnown RBP11.16□□□□□ -0.62
NUP50-219ENST00000497960 BAP18Q8IXM2 172 aa11.16□□□□□ -0.62
NUP50-219ENST00000497960 PAXXQ9BUH6 204 aa11.16□□□□□ -0.62
NUP50-219ENST00000497960 C1QTNF4Q9BXJ3 329 aa11.16□□□□□ -0.62
NUP50-219ENST00000497960 TMEM14CQ9P0S9 112 aa11.16□□□□□ -0.62
NUP50-219ENST00000497960 HLA-DRB4X5D2U9 266 aa11.16□□□□□ -0.62
NUP50-219ENST00000497960 H3BTX0 84 aa11.15□□□□□ -0.62
NUP50-219ENST00000497960 ISLRO14498 428 aa11.15□□□□□ -0.62
NUP50-219ENST00000497960 DEFB4AO15263 64 aa11.15□□□□□ -0.62
NUP50-219ENST00000497960 HMGB3O15347 200 aaKnown RBP11.15□□□□□ -0.62
NUP50-219ENST00000497960 EIF3GO75821 320 aaKnown RBP eCLIP11.15□□□□□ -0.62
NUP50-219ENST00000497960 OR10J4P0C629 311 aa11.15□□□□□ -0.62
NUP50-219ENST00000497960 SEC11BP0C7V7 166 aa11.15□□□□□ -0.62
NUP50-219ENST00000497960 IGLC2P0DOY2 106 aa11.15□□□□□ -0.62
NUP50-219ENST00000497960 SLC51BQ86UW2 128 aa11.15□□□□□ -0.62
NUP50-219ENST00000497960 FAM167A-AS1Q96KT0 104 aa11.15□□□□□ -0.62
NUP50-219ENST00000497960 SLC50A1Q9BRV3 221 aa11.15□□□□□ -0.62
NUP50-219ENST00000497960 ACTR3CQ9C0K3 210 aaPredicted RBP11.15□□□□□ -0.62
NUP50-219ENST00000497960 OR51M1Q9H341 326 aa11.15□□□□□ -0.62
NUP50-219ENST00000497960 CLEC5AQ9NY25 188 aa11.15□□□□□ -0.62
NUP50-219ENST00000497960 CSMD3Q7Z407 3707 aa11.14□□□□□ -0.63
NUP50-219ENST00000497960 MIFP14174 115 aa11.14□□□□□ -0.63
NUP50-219ENST00000497960 GUK1Q16774 197 aa11.14□□□□□ -0.63
NUP50-219ENST00000497960 FOXI2Q6ZQN5 318 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms