RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 TRIQKQ629K1 86 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 LINC00322Q6ZN03 302 aaPredicted RBP1.07□□□□□ -2.24
SMC4-225ENST00000497203 NEK7Q8TDX7 302 aa1.07□□□□□ -2.24
SMC4-225ENST00000497203 MYO18AQ92614 2054 aaKnown RBP1.07□□□□□ -2.24
SMC4-225ENST00000497203 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 TRAV27A0A087WT01 109 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 IGLV3-32A0A0A0MS00 114 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 OR2T8A6NH00 312 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 GPR31O00270 319 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 CXCL1P09341 107 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 IDO1P14902 403 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 GNG10P50151 68 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 PSG9Q00887 426 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 FAM24BQ8N5W8 94 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 RAB37Q96AX2 223 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 HYLS1Q96M11 299 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 AMELYQ99218 206 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 ALPK3Q96L96 1907 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 FREM3P0C091 2139 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 CD109Q6YHK3 1445 aa1.06□□□□□ -2.24
SMC4-225ENST00000497203 SYNMO15061 1565 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 CASP8AP2Q9UKL3 1982 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 TRPM1Q7Z4N2 1603 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 B4DSR2 109 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 F8W1H4 67 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 H3BRM9 83 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 RER1O15258 196 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 LYRM1O43325 122 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 PFDN1O60925 122 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 CSN2P05814 226 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 G0S2P27469 103 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 CRYBA4P53673 196 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 RTL8BQ17RB0 113 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 ARPINQ7Z6K5 226 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 OR5AS1Q8N127 324 aa1.05□□□□□ -2.24
SMC4-225ENST00000497203 PEAK1Q9H792 1746 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 CST7O76096 145 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 IGLV1-51P01701 117 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 COX7CP15954 63 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 GLRXP35754 106 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 VBP1P61758 197 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 HBBP68871 147 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 SPRNQ5BIV9 151 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 FKBP1CQ5VVH2 108 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 KRTAP26-1Q6PEX3 210 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 PHF5AQ7RTV0 110 aaKnown RBP1.04□□□□□ -2.24
SMC4-225ENST00000497203 GKN2Q86XP6 184 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 PLPP5Q8NEB5 264 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 OR10AG1Q8NH19 301 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 OR2H1Q9GZK4 316 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 MED11Q9P086 117 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 UNC13CQ8NB66 2214 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 PIK3C2AO00443 1686 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 ADGBQ8N7X0 1667 aa1.04□□□□□ -2.24
SMC4-225ENST00000497203 PTPRFP10586 1907 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 EML5Q05BV3 1969 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 hDV103S1A0JD37 113 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 ODAMA1E959 279 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 H3BQV1 296 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 K7ERJ3 54 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 RPL35P42766 123 aaKnown RBP1.03□□□□□ -2.24
SMC4-225ENST00000497203 MSMO1Q15800 293 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 LTC4SQ16873 150 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 HAGHLQ6PII5 290 aaPredicted RBP1.03□□□□□ -2.24
SMC4-225ENST00000497203 LRRC18Q8N456 261 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 Q8TAT8 98 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 DYDC1Q8WWB3 177 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 GGACTQ9BVM4 153 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 TMEM138Q9NPI0 162 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 TNFSF18Q9UNG2 199 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 NUBP2Q9Y5Y2 271 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 V9GYQ6 96 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 NISCHQ9Y2I1 1504 aa1.03□□□□□ -2.24
SMC4-225ENST00000497203 NCR3O14931 201 aa1.02□□□□□ -2.25
SMC4-225ENST00000497203 SIP14410 1827 aa1.02□□□□□ -2.25
SMC4-225ENST00000497203 CIRBPQ14011 172 aaKnown RBP1.02□□□□□ -2.25
SMC4-225ENST00000497203 DCUN1D2Q6PH85 259 aa1.02□□□□□ -2.25
SMC4-225ENST00000497203 N4BP2Q86UW6 1770 aaPredicted RBP1.02□□□□□ -2.25
SMC4-225ENST00000497203 STX12Q86Y82 276 aa1.02□□□□□ -2.25
SMC4-225ENST00000497203 ISOC1Q96CN7 298 aa1.02□□□□□ -2.25
SMC4-225ENST00000497203 CECR2Q9BXF3 1484 aa1.02□□□□□ -2.25
SMC4-225ENST00000497203 PCBD2Q9H0N5 130 aa1.02□□□□□ -2.25
SMC4-225ENST00000497203 ATPIF1Q9UII2 106 aa1.02□□□□□ -2.25
SMC4-225ENST00000497203 RFX7Q2KHR2 1363 aa1.01□□□□□ -2.25
SMC4-225ENST00000497203 MAP1LC3B2A6NCE7 125 aa1.01□□□□□ -2.25
SMC4-225ENST00000497203 KLF7O75840 302 aaPredicted RBP1.01□□□□□ -2.25
SMC4-225ENST00000497203 FAM216BQ8N7L0 139 aa1.01□□□□□ -2.25
SMC4-225ENST00000497203 BORCS8Q96FH0 119 aa1.01□□□□□ -2.25
SMC4-225ENST00000497203 MCEEQ96PE7 176 aa1.01□□□□□ -2.25
SMC4-225ENST00000497203 ASB4Q9Y574 426 aa1.01□□□□□ -2.25
SMC4-225ENST00000497203 MED12Q93074 2177 aa1.01□□□□□ -2.25
SMC4-225ENST00000497203 E9PCH4 1651 aa1□□□□□ -2.25
SMC4-225ENST00000497203 ZCCHC11Q5TAX3 1644 aaKnown RBP1□□□□□ -2.25
SMC4-225ENST00000497203 EIF3IQ13347 325 aaKnown RBP1□□□□□ -2.25
SMC4-225ENST00000497203 TMEM14EPQ6UXP3 125 aa1□□□□□ -2.25
SMC4-225ENST00000497203 PRR15Q8IV56 129 aa1□□□□□ -2.25
SMC4-225ENST00000497203 CENPHQ9H3R5 247 aa1□□□□□ -2.25
SMC4-225ENST00000497203 HSPB8Q9UJY1 196 aa1□□□□□ -2.25
SMC4-225ENST00000497203 RNF11Q9Y3C5 154 aa1□□□□□ -2.25
SMC4-225ENST00000497203 MGAMO43451 1857 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms