RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 AVPP01185 164 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 RAB5AP20339 215 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 PYY3Q5JQD4 70 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 TCF24Q7RTU0 167 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 GPHB5Q86YW7 130 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 KLHL30-AS1Q8NEE0 82 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 OR1N2Q8NGR9 330 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 DUX5Q96PT3 197 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 TSSC4Q9Y5U2 329 aaPredicted RBP6.52□□□□□ -1.37
USP54-215ENST00000497106 GP9P14770 177 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 HOXA5P20719 270 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 LEPP41159 167 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 HIST2H2BCQ6DN03 193 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 FAM24BQ8N5W8 94 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 ASCL2Q99929 193 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 RHPN1-AS1Q9BWJ2 59 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 IL36BQ9NZH7 164 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 NAT8BQ9UHF3 227 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 PSG8Q9UQ74 426 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 A0A096LNT2 108 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 A0A1B0GW15 77 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 FSHBP01225 129 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 RNASE1P07998 156 aaKnown RBP6.52□□□□□ -1.37
USP54-215ENST00000497106 MRGPRG-AS1Q2M3A8 158 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 DMRTA1Q5VZB9 504 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 PATE2Q6UY27 113 aa6.52□□□□□ -1.37
USP54-215ENST00000497106 A0A087X0K7 114 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 FAM181BA6NEQ2 426 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 ISLRO14498 428 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 EGR2P11161 476 aaPredicted RBP6.51□□□□□ -1.37
USP54-215ENST00000497106 MRPL52Q86TS9 123 aaKnown RBP6.51□□□□□ -1.37
USP54-215ENST00000497106 NRN1Q9NPD7 142 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 H3BTX0 84 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 OR2D3Q8NGH3 330 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 C4orf3Q8WVX3 66 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 FAM167A-AS1Q96KT0 104 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 MRPL36Q9P0J6 103 aaKnown RBP6.51□□□□□ -1.37
USP54-215ENST00000497106 RBX1P62877 108 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 PSG3Q16557 428 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 KLK9Q2XQG4 91 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 ISOC2Q96AB3 205 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 LINC00477Q96M19 166 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 KLK9Q9UKQ9 250 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 TRAPPC1Q9Y5R8 145 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 WNK2Q9Y3S1 2297 aa6.51□□□□□ -1.37
USP54-215ENST00000497106 S100A4P26447 101 aaKnown RBP6.5□□□□□ -1.37
USP54-215ENST00000497106 LINC01551Q86U37 167 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 PIFOQ8TCI5 191 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 ZNF492Q9P255 531 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 ZNF462Q96JM2 2506 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 RBAKDNA6NC62 111 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 IGLV1-40P01703 118 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 WFDC3Q8IUB2 231 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 ZNF414Q96IQ9 312 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 RAX2Q96IS3 184 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 RPP21Q9H633 154 aaKnown RBP6.5□□□□□ -1.37
USP54-215ENST00000497106 AKAP13Q12802 2813 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 IGHV3-66A0A0C4DH42 116 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 ADCYAP1P18509 176 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 CCDC140Q96MF4 163 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 ZNF702PQ9H963 129 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 SMPXQ9UHP9 88 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 GNG5P63218 68 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 LCNL1Q6ZST4 164 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 OR10D4PQ8NGN7 298 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 TPPP3Q9BW30 176 aa6.5□□□□□ -1.37
USP54-215ENST00000497106 IGHV3-49A0A0A0MS15 119 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 TRBV6-1A0A0K0K1D8 114 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 GGTLC3B5MD39 225 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 HLA-DQA1P01909 254 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 ORM1P02763 201 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 NPSP0C0P6 89 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 PPIFP30405 207 aaKnown RBP6.49□□□□□ -1.37
USP54-215ENST00000497106 AKAP6Q13023 2319 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 IGHV3OR16-13A0A075B7E8 117 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 IGHV3-74A0A0B4J1X5 117 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 LGALS9O00182 355 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 HILS1P60008 231 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 Q86TA4 180 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 TMEM183AQ8IXX5 376 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 OCC1Q8TAD7 63 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 ZNF586Q9NXT0 402 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 DSCAML1Q8TD84 2053 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 A8MWP6 167 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 TMEM238C9JI98 176 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 HIST1H1AQ02539 215 aaPredicted RBP6.49□□□□□ -1.37
USP54-215ENST00000497106 LCN12Q6JVE5 192 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 IGKV3-7A0A075B6H7 116 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 IGHV3OR16-8A0A075B7F1 116 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 TRAV34A0A0B4J273 112 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 CLPSL1A2RUU4 121 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 CBY3A6NI87 242 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 DIRC3C9JPN6 131 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 C9JQL5 133 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 BUB3O43684 328 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 NDUFA7O95182 113 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 GCGP01275 180 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 SNRPCP09234 159 aaKnown RBP6.49□□□□□ -1.37
USP54-215ENST00000497106 FOXL1Q12952 345 aa6.49□□□□□ -1.37
USP54-215ENST00000497106 CT83Q5H943 113 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms