RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 DCANP1Q8TF63 244 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 FXYD5Q96DB9 178 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 C2orf50Q96LR7 162 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 ODF3Q96PU9 254 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 MED12LQ86YW9 2145 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 SLIT1O75093 1534 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 COL14A1Q05707 1796 aaKnown RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 SCN5AQ14524 2016 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 GBF1Q92538 1859 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 VWA8A3KMH1 1905 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 TRAV41A0A0B4J266 112 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 NDUFB3O43676 98 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 RPL34P49207 117 aaKnown RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 DSCR4P56555 118 aaPredicted RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 CCL8P80075 99 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 ABCA11PQ4W5N1 156 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 PIK3CD-AS1Q5SR53 167 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 ATP1A1-AS1Q5TC04 95 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 MORN5Q5VZ52 161 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 MAPKAPK5-AS1Q8N8E1 139 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 OR8A1Q8NGG7 326 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNF563Q8TA94 476 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 RFESDQ8TAC1 157 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 TMEM158Q8WZ71 300 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 C17orf77Q96MU5 243 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 HDHD3Q9BSH5 251 aaPredicted RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 LIME1Q9H400 295 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 Q9HAA7 133 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 NXT2Q9NPJ8 142 aaKnown RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 HIGD1BQ9P298 99 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 TP73-AS1Q9UF72 201 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 LINC00527Q9UJ94 153 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 ALS2Q96Q42 1657 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 RALGAPA1Q6GYQ0 2036 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 TRAV17A0A0B4J275 112 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 A0A0D9SEW6 157 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 RBMY1BA6NDE4 496 aaKnown RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 RBMY1EA6NEQ0 496 aaKnown RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 F2Z2F3 143 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 UBE2L6O14933 153 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 RBMY1DP0C7P1 496 aaKnown RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 RBMY1A1P0DJD3 496 aaKnown RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 CCL23P55773 120 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 HERVK_113P61574 105 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 RSPO1Q2MKA7 263 aaPredicted RBP2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 FAM78AQ5JUQ0 283 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 C12orf73Q69YU5 71 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 C6orf201Q7Z4U5 140 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 PRSS3P2Q8NHM4 247 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNF721Q8TF20 911 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 CCL17Q92583 94 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 CHAC1Q9BUX1 264 aa2.38□□□□□ -2.03
SNRNP48-202ENST00000496946 SNRNP200O75643 2136 aaKnown RBP2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 SLX4Q8IY92 1834 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 LOC101059948A0A1B0GTJ6 334 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 IGKV2-30P06310 120 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 PLA2G2AP14555 144 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 CD70P32970 193 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 SEC61BP60468 96 aaKnown RBP2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 SRSF9Q13242 221 aaKnown RBP eCLIP2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 TRNP1Q6NT89 227 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 Q6ZS49 121 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 FP248Q71RG6 208 aaPredicted RBP2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 VN1R4Q7Z5H5 301 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNF843Q8N446 348 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNF645Q8N7E2 425 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 IL1F10Q8WWZ1 152 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 H1FXQ92522 213 aaKnown RBP2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 LYZL4Q96KX0 146 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 GNG13Q9P2W3 67 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 MOB4Q9Y3A3 225 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 TJP1Q07157 1748 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 IGHV1-24A0A0C4DH33 117 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 NSUN5P1Q3KNT7 163 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 WDR38Q5JTN6 314 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 SERP2Q8N6R1 65 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 TMEM75Q8N9X5 138 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNF286AQ9HBT8 521 aa2.37□□□□□ -2.03
SNRNP48-202ENST00000496946 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 HEATR5AQ86XA9 2040 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 ANKRD12Q6UB98 2062 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 DDX60Q8IY21 1712 aaKnown RBP2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 BRCA1P38398 1863 aaKnown RBP2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 LY6G6EA0A0G2JKS1 128 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 TRBV27A0A0K0K1C4 114 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 UBE2L5PA0A1B0GUS4 154 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 M0R378 163 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 BMPR1BO00238 502 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNF73O43830 326 aaPredicted RBP2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNF883P0CG24 379 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 IGHV4-31P0DP07 118 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 RIGQ13278 110 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 MIC13Q5XKP0 118 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 CLEC19AQ6UXS0 136 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 ZNF584Q8IVC4 421 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 ODF3L1Q8IXM7 274 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 FAM19A2Q8N3H0 131 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 OR5C1Q8NGR4 320 aa2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 CNRIP1Q96F85 164 aaPredicted RBP2.36□□□□□ -2.03
SNRNP48-202ENST00000496946 PGLYRP4Q96LB8 373 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms