RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SORL1Q92673 2214 aa16.28■□□□□ 0.2
C9orf3-222ENST00000496567 EIF3GO75821 320 aaKnown RBP eCLIP16.28■□□□□ 0.2
C9orf3-222ENST00000496567 FHITP49789 147 aa16.28■□□□□ 0.2
C9orf3-222ENST00000496567 CMC4P56277 68 aaPredicted RBP16.28■□□□□ 0.2
C9orf3-222ENST00000496567 ZNF726P1Q15940 193 aa16.28■□□□□ 0.2
C9orf3-222ENST00000496567 LRRC20Q8TCA0 184 aa16.28■□□□□ 0.2
C9orf3-222ENST00000496567 C17orf77Q96MU5 243 aa16.28■□□□□ 0.2
C9orf3-222ENST00000496567 H3BQ15 152 aa16.27■□□□□ 0.2
C9orf3-222ENST00000496567 CXorf1O96002 111 aa16.27■□□□□ 0.2
C9orf3-222ENST00000496567 ID1P41134 155 aa16.27■□□□□ 0.2
C9orf3-222ENST00000496567 SSX7Q7RTT5 188 aa16.27■□□□□ 0.2
C9orf3-222ENST00000496567 ZNF503Q96F45 646 aa16.27■□□□□ 0.2
C9orf3-222ENST00000496567 C16orf92Q96LL3 132 aa16.27■□□□□ 0.2
C9orf3-222ENST00000496567 ISLRO14498 428 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 OR10J4P0C629 311 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 NBEAP1P0C6P0 100 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 ARL14EPLP0DKL9 152 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 SNRPD3P62318 126 aaKnown RBP16.26■□□□□ 0.19
C9orf3-222ENST00000496567 UBE2L3P68036 154 aaKnown RBP16.26■□□□□ 0.19
C9orf3-222ENST00000496567 FXYD5Q96DB9 178 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 ZNF586Q9NXT0 402 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 TRBV19A0A075B6N1 114 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 MAP1LC3B2A6NCE7 125 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 SOCS3O14543 225 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 SNRPCP09234 159 aaKnown RBP16.26■□□□□ 0.19
C9orf3-222ENST00000496567 PSMB3P49720 205 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 CD81P60033 236 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 PDE6HQ13956 83 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 PRR25Q96S07 402 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 FAM110AQ9BQ89 295 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 SLC50A1Q9BRV3 221 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 MAP1LC3BQ9GZQ8 125 aa16.26■□□□□ 0.19
C9orf3-222ENST00000496567 ZNF253O75346 499 aa16.25■□□□□ 0.19
C9orf3-222ENST00000496567 BLNKQ8WV28 456 aa16.25■□□□□ 0.19
C9orf3-222ENST00000496567 MBD3L1Q8WWY6 194 aa16.25■□□□□ 0.19
C9orf3-222ENST00000496567 H3BTX0 84 aa16.24■□□□□ 0.19
C9orf3-222ENST00000496567 NMBP08949 121 aa16.24■□□□□ 0.19
C9orf3-222ENST00000496567 CD7P09564 240 aa16.24■□□□□ 0.19
C9orf3-222ENST00000496567 H2AFB1P0C5Y9 115 aa16.24■□□□□ 0.19
C9orf3-222ENST00000496567 GCHFRP30047 84 aa16.24■□□□□ 0.19
C9orf3-222ENST00000496567 RAB14P61106 215 aa16.24■□□□□ 0.19
C9orf3-222ENST00000496567 CLLU1Q5K131 121 aa16.24■□□□□ 0.19
C9orf3-222ENST00000496567 SAT2Q96F10 170 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-222ENST00000496567 ZNF688P0C7X2 276 aa16.23■□□□□ 0.19
C9orf3-222ENST00000496567 FAM24BQ8N5W8 94 aa16.23■□□□□ 0.19
C9orf3-222ENST00000496567 SFT2D1Q8WV19 159 aa16.23■□□□□ 0.19
C9orf3-222ENST00000496567 ZNF331Q9NQX6 463 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-222ENST00000496567 TMEM167BQ9NRX6 74 aa16.23■□□□□ 0.19
C9orf3-222ENST00000496567 CLEC5AQ9NY25 188 aa16.23■□□□□ 0.19
C9orf3-222ENST00000496567 OR11H12B2RN74 326 aa16.22■□□□□ 0.19
C9orf3-222ENST00000496567 PSG9Q00887 426 aa16.22■□□□□ 0.19
C9orf3-222ENST00000496567 IQCF2Q8IXL9 164 aa16.22■□□□□ 0.19
C9orf3-222ENST00000496567 ZNF705EA8MWA4 302 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-222ENST00000496567 FGF8P55075 233 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-222ENST00000496567 ODF3L2Q3SX64 289 aa16.21■□□□□ 0.19
C9orf3-222ENST00000496567 MAP6D1Q9H9H5 199 aa16.21■□□□□ 0.19
C9orf3-222ENST00000496567 NBEAL1Q6ZS30 2694 aa16.21■□□□□ 0.19
C9orf3-222ENST00000496567 TEX46H3BTG2 121 aa16.21■□□□□ 0.18
C9orf3-222ENST00000496567 SLC17A3O00476 420 aa16.21■□□□□ 0.18
C9orf3-222ENST00000496567 DEFB131AP59861 70 aa16.21■□□□□ 0.18
C9orf3-222ENST00000496567 PSMG4Q5JS54 123 aa16.21■□□□□ 0.18
C9orf3-222ENST00000496567 SUN5Q8TC36 379 aa16.21■□□□□ 0.18
C9orf3-222ENST00000496567 LINC00052Q96N35 136 aa16.21■□□□□ 0.18
C9orf3-222ENST00000496567 NOTCH1P46531 2555 aa16.2■□□□□ 0.18
C9orf3-222ENST00000496567 TRAV8-2A0A0B4J237 113 aa16.2■□□□□ 0.18
C9orf3-222ENST00000496567 NDUFB4O95168 129 aa16.2■□□□□ 0.18
C9orf3-222ENST00000496567 BLOC1S1P78537 153 aa16.2■□□□□ 0.18
C9orf3-222ENST00000496567 Q8N1Y9 231 aa16.2■□□□□ 0.18
C9orf3-222ENST00000496567 LYPD1Q8N2G4 141 aa16.2■□□□□ 0.18
C9orf3-222ENST00000496567 AAMDCQ9H7C9 122 aa16.2■□□□□ 0.18
C9orf3-222ENST00000496567 C19orf73Q9NVV2 129 aa16.2■□□□□ 0.18
C9orf3-222ENST00000496567 HBE1P02100 147 aa16.19■□□□□ 0.18
C9orf3-222ENST00000496567 IGFL4Q6B9Z1 124 aa16.19■□□□□ 0.18
C9orf3-222ENST00000496567 AURKAIP1Q9NWT8 199 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-222ENST00000496567 TRAV1-1A0A0B4J248 108 aa16.18■□□□□ 0.18
C9orf3-222ENST00000496567 RANP62826 216 aaKnown RBP16.18■□□□□ 0.18
C9orf3-222ENST00000496567 PSG3Q16557 428 aa16.18■□□□□ 0.18
C9orf3-222ENST00000496567 RNF182Q8N6D2 247 aa16.18■□□□□ 0.18
C9orf3-222ENST00000496567 TMPRSS5Q9H3S3 457 aa16.18■□□□□ 0.18
C9orf3-222ENST00000496567 PRELID1Q9Y255 219 aa16.17■□□□□ 0.18
C9orf3-222ENST00000496567 DNAH3Q8TD57 4116 aa16.17■□□□□ 0.18
C9orf3-222ENST00000496567 APRG1Q8IVJ8 170 aa16.17■□□□□ 0.18
C9orf3-222ENST00000496567 C20orf173Q96LM9 149 aa16.17■□□□□ 0.18
C9orf3-222ENST00000496567 Q9H3A6 140 aa16.17■□□□□ 0.18
C9orf3-222ENST00000496567 A0A1B0GV50 99 aa16.16■□□□□ 0.18
C9orf3-222ENST00000496567 PRB2P02812 416 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-222ENST00000496567 HLA-DMBP28068 263 aa16.16■□□□□ 0.18
C9orf3-222ENST00000496567 EXOC3-AS1Q8N2X6 119 aa16.16■□□□□ 0.18
C9orf3-222ENST00000496567 DEFB125Q8N687 156 aa16.16■□□□□ 0.18
C9orf3-222ENST00000496567 ZNF738Q8NE65 137 aa16.16■□□□□ 0.18
C9orf3-222ENST00000496567 MRPL53Q96EL3 112 aaKnown RBP16.16■□□□□ 0.18
C9orf3-222ENST00000496567 PPT1P50897 306 aa16.15■□□□□ 0.18
C9orf3-222ENST00000496567 ICAM4Q14773 271 aa16.15■□□□□ 0.18
C9orf3-222ENST00000496567 WFDC10AQ9H1F0 79 aa16.15■□□□□ 0.18
C9orf3-222ENST00000496567 OTORQ9NRC9 128 aa16.15■□□□□ 0.18
C9orf3-222ENST00000496567 A0A1W2PRE2 83 aa16.14■□□□□ 0.17
C9orf3-222ENST00000496567 EBLN2Q6P2I7 272 aa16.13■□□□□ 0.17
C9orf3-222ENST00000496567 FOXI2Q6ZQN5 318 aa16.13■□□□□ 0.17
C9orf3-222ENST00000496567 RPUSD4Q96CM3 377 aaKnown RBP16.13■□□□□ 0.17
C9orf3-222ENST00000496567 NKX6-2Q9C056 277 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms