RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 RAB3DO95716 219 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 HRASP01112 189 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 SERPINE2P07093 398 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 CTSDP07339 412 aaPredicted RBP2.99□□□□□ -1.93
VPS52-222ENST00000495981 OR4E1P0C645 316 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 RAB3BP20337 219 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 MYL9P24844 172 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 S100PP25815 95 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 RCVRNP35243 200 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 RAB11AP62491 216 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 C22orf42Q6IC83 251 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 SFXN4Q6P4A7 337 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 CNIH2Q6PI25 160 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 PLET1Q6UQ28 207 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 ZNF818PQ6ZRF7 136 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 Q6ZTC4 211 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 OR5B3Q8NH48 314 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 OR51H1Q8NH63 302 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 LSM10Q969L4 123 aaKnown RBP2.99□□□□□ -1.93
VPS52-222ENST00000495981 GALNT14Q96FL9 552 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 C12orf57Q99622 126 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 OPRPNQ99935 248 aaPredicted RBP2.99□□□□□ -1.93
VPS52-222ENST00000495981 DCUN1D5Q9BTE7 237 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 MFFQ9GZY8 342 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 ATG5Q9H1Y0 275 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 DCSTAMPQ9H295 470 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 TREM1Q9NP99 234 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 CCL28Q9NRJ3 127 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 NDUFA4L2Q9NRX3 87 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 C21orf62Q9NYP8 219 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 APLNQ9ULZ1 77 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 CELA1Q9UNI1 258 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 IGHV3-49A0A0A0MS15 119 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 IGHV3-21A0A0B4J1V1 117 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 A0A0G2JRQ6 117 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 IGHV7-4-1A0A0J9YVY3 117 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 I3L2K1 104 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 K7EMT4 169 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 PDCD5O14737 125 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 NUPL2O15504 423 aaKnown RBP2.98□□□□□ -1.93
VPS52-222ENST00000495981 FABP1P07148 127 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 CTSGP08311 255 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 CTXN2P0C2S0 81 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 SMIM6P0DI80 62 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 OR13C7P0DN81 318 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 DEFA4P12838 97 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 NQO2P16083 231 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 MEOX2P50222 304 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 TCTAP57738 103 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 TAS2R60P59551 318 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 CATR1Q13166 79 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 ARL6IP1Q15041 203 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 CDNFQ49AH0 187 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 HSD17B13Q7Z5P4 300 aaPredicted RBP2.98□□□□□ -1.93
VPS52-222ENST00000495981 MTURNQ8N3F0 131 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 OR1S2Q8NGQ3 325 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 OR5H6Q8NGV6 325 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 OR11H2Q8NH07 326 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 CHCHD10Q8WYQ3 142 aaPredicted RBP2.98□□□□□ -1.93
VPS52-222ENST00000495981 C18orf15Q96N68 181 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 ATP5SQ99766 215 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 RHPN1-AS1Q9BWJ2 59 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 SCRT1Q9BWW7 348 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 COMMD5Q9GZQ3 224 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 NXF2Q9GZY0 626 aaKnown RBP2.98□□□□□ -1.93
VPS52-222ENST00000495981 VSIRQ9H7M9 311 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 HRASLSQ9HDD0 168 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 TMEM14BQ9NUH8 114 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 SCN3BQ9NY72 215 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 RSL24D1Q9UHA3 163 aaKnown RBP2.98□□□□□ -1.93
VPS52-222ENST00000495981 SMPXQ9UHP9 88 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 TPRKBQ9Y3C4 175 aa2.98□□□□□ -1.93
VPS52-222ENST00000495981 PUS1Q9Y606 427 aaKnown RBP eCLIP2.98□□□□□ -1.93
VPS52-222ENST00000495981 AGRNO00468 2067 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 TRAV2A0A0B4J234 112 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 C16orf90A8MZG2 172 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 GOSR2O14653 212 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 HPRT1P00492 218 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 IGKV1-39P01597 117 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 CD74P04233 296 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 IGKV1D-39P04432 117 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 IFNA4P05014 189 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 P0C879 139 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 GNRHRP30968 328 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 TFPI2P48307 235 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 FXYD4P59646 89 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 GABARAPL2P60520 117 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 SOHLH1Q5JUK2 328 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 AADACL3Q5VUY0 350 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 UBE2UQ5VVX9 321 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 Q6ZR54 194 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 ACOT7LQ6ZUV0 252 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 TMUB2Q71RG4 321 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 UBAC2Q8NBM4 344 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 OR1L8Q8NGR8 309 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 OR1P1Q8NH06 330 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 OR52E5Q8NH55 327 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 DTD1Q8TEA8 209 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 RARRES2Q99969 163 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms