RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 CXCL2P19875 107 aa10.46□□□□□ -0.73
NUP58-214ENST00000495460 CXCL3P19876 107 aa10.46□□□□□ -0.73
NUP58-214ENST00000495460 AP3S2P59780 193 aa10.46□□□□□ -0.73
NUP58-214ENST00000495460 PSG3Q16557 428 aa10.46□□□□□ -0.73
NUP58-214ENST00000495460 PXDC1Q5TGL8 231 aa10.46□□□□□ -0.73
NUP58-214ENST00000495460 DYNC2LI1Q8TCX1 351 aa10.46□□□□□ -0.73
NUP58-214ENST00000495460 RNASE8Q8TDE3 154 aaKnown RBP10.46□□□□□ -0.73
NUP58-214ENST00000495460 TMEM263Q8WUH6 116 aaKnown RBP10.46□□□□□ -0.73
NUP58-214ENST00000495460 LINC01587Q99440 93 aa10.46□□□□□ -0.73
NUP58-214ENST00000495460 MCUBQ9NWR8 336 aa10.46□□□□□ -0.73
NUP58-214ENST00000495460 H7BYZ3 331 aa10.45□□□□□ -0.74
NUP58-214ENST00000495460 HYPMO75409 117 aa10.45□□□□□ -0.74
NUP58-214ENST00000495460 CDKN1BP46527 198 aa10.45□□□□□ -0.74
NUP58-214ENST00000495460 UBE2MP61081 183 aaKnown RBP10.45□□□□□ -0.74
NUP58-214ENST00000495460 RAP2BP61225 183 aa10.45□□□□□ -0.74
NUP58-214ENST00000495460 ID3Q02535 119 aa10.45□□□□□ -0.74
NUP58-214ENST00000495460 SPCS2Q15005 226 aa10.45□□□□□ -0.74
NUP58-214ENST00000495460 TMEM182Q6ZP80 229 aaPredicted RBP10.45□□□□□ -0.74
NUP58-214ENST00000495460 SSX7Q7RTT5 188 aa10.45□□□□□ -0.74
NUP58-214ENST00000495460 RAB2BQ8WUD1 216 aa10.45□□□□□ -0.74
NUP58-214ENST00000495460 RNF141Q8WVD5 230 aa10.45□□□□□ -0.74
NUP58-214ENST00000495460 STRAPQ9Y3F4 350 aaKnown RBP10.45□□□□□ -0.74
NUP58-214ENST00000495460 PRM2P04554 102 aa10.44□□□□□ -0.74
NUP58-214ENST00000495460 IAPPP10997 89 aa10.44□□□□□ -0.74
NUP58-214ENST00000495460 TMBIM6P55061 237 aa10.44□□□□□ -0.74
NUP58-214ENST00000495460 CLINT1Q14677 625 aa10.44□□□□□ -0.74
NUP58-214ENST00000495460 CYP2G1PQ6ZSU1 146 aa10.44□□□□□ -0.74
NUP58-214ENST00000495460 BAP18Q8IXM2 172 aa10.44□□□□□ -0.74
NUP58-214ENST00000495460 ZNF738Q8NE65 137 aa10.44□□□□□ -0.74
NUP58-214ENST00000495460 RXFP4Q8TDU9 374 aa10.44□□□□□ -0.74
NUP58-214ENST00000495460 KRTAP4-7Q9BYR0 210 aa10.44□□□□□ -0.74
NUP58-214ENST00000495460 HIGD1AQ9Y241 93 aa10.44□□□□□ -0.74
NUP58-214ENST00000495460 FABP12A6NFH5 140 aa10.43□□□□□ -0.74
NUP58-214ENST00000495460 IL5P05113 134 aa10.43□□□□□ -0.74
NUP58-214ENST00000495460 M6PRP20645 277 aa10.43□□□□□ -0.74
NUP58-214ENST00000495460 LCE1DQ5T752 114 aa10.43□□□□□ -0.74
NUP58-214ENST00000495460 CCDC190Q86UF4 302 aa10.43□□□□□ -0.74
NUP58-214ENST00000495460 RNF182Q8N6D2 247 aa10.43□□□□□ -0.74
NUP58-214ENST00000495460 MRPS26Q9BYN8 205 aaKnown RBP10.43□□□□□ -0.74
NUP58-214ENST00000495460 TRAV12-2A0A075B6T6 113 aa10.42□□□□□ -0.74
NUP58-214ENST00000495460 WRBO00258 174 aa10.42□□□□□ -0.74
NUP58-214ENST00000495460 SFT2D2O95562 160 aa10.42□□□□□ -0.74
NUP58-214ENST00000495460 GATA2P23769 480 aaPredicted RBP10.42□□□□□ -0.74
NUP58-214ENST00000495460 TNFSF8P32971 234 aa10.42□□□□□ -0.74
NUP58-214ENST00000495460 AKR1C1Q04828 323 aa10.42□□□□□ -0.74
NUP58-214ENST00000495460 FCN2Q15485 313 aa10.42□□□□□ -0.74
NUP58-214ENST00000495460 SPANXN5Q5MJ07 72 aa10.42□□□□□ -0.74
NUP58-214ENST00000495460 SPATA12Q7Z6I5 190 aa10.42□□□□□ -0.74
NUP58-214ENST00000495460 GNPNAT1Q96EK6 184 aaPredicted RBP10.42□□□□□ -0.74
NUP58-214ENST00000495460 C18orf15Q96N68 181 aa10.42□□□□□ -0.74
NUP58-214ENST00000495460 SLIRPQ9GZT3 109 aaKnown RBP10.42□□□□□ -0.74
NUP58-214ENST00000495460 NPVFQ9HCQ7 196 aa10.42□□□□□ -0.74
NUP58-214ENST00000495460 PPP1R14DQ9NXH3 145 aa10.42□□□□□ -0.74
NUP58-214ENST00000495460 PMS2P5A8MQ11 134 aa10.41□□□□□ -0.74
NUP58-214ENST00000495460 MRPS12O15235 138 aaKnown RBP10.41□□□□□ -0.74
NUP58-214ENST00000495460 RHOBP62745 196 aa10.41□□□□□ -0.74
NUP58-214ENST00000495460 IGFL4Q6B9Z1 124 aa10.41□□□□□ -0.74
NUP58-214ENST00000495460 LCN15Q6UWW0 184 aa10.41□□□□□ -0.74
NUP58-214ENST00000495460 SMIM8Q96KF7 97 aa10.41□□□□□ -0.74
NUP58-214ENST00000495460 SLC50A1Q9BRV3 221 aa10.41□□□□□ -0.74
NUP58-214ENST00000495460 NOP10Q9NPE3 64 aaKnown RBP10.41□□□□□ -0.74
NUP58-214ENST00000495460 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
NUP58-214ENST00000495460 PAIP2BQ9ULR5 123 aaKnown RBP10.41□□□□□ -0.74
NUP58-214ENST00000495460 VAMP1P23763 118 aa10.4□□□□□ -0.74
NUP58-214ENST00000495460 POLR2GP62487 172 aaKnown RBP eCLIP10.4□□□□□ -0.74
NUP58-214ENST00000495460 DLK1P80370 383 aa10.4□□□□□ -0.74
NUP58-214ENST00000495460 HIST1H1AQ02539 215 aaPredicted RBP10.4□□□□□ -0.74
NUP58-214ENST00000495460 FGL1Q08830 312 aa10.4□□□□□ -0.74
NUP58-214ENST00000495460 DAZ2Q13117 558 aaKnown RBP10.4□□□□□ -0.74
NUP58-214ENST00000495460 TMED4Q7Z7H5 227 aa10.4□□□□□ -0.74
NUP58-214ENST00000495460 CCDC28AQ8IWP9 274 aa10.4□□□□□ -0.74
NUP58-214ENST00000495460 TOMM5Q8N4H5 51 aa10.4□□□□□ -0.74
NUP58-214ENST00000495460 LRRC20Q8TCA0 184 aa10.4□□□□□ -0.74
NUP58-214ENST00000495460 TRIM63Q969Q1 353 aa10.4□□□□□ -0.74
NUP58-214ENST00000495460 RPUSD4Q96CM3 377 aaKnown RBP10.4□□□□□ -0.74
NUP58-214ENST00000495460 ODF3Q96PU9 254 aa10.4□□□□□ -0.74
NUP58-214ENST00000495460 GGACTQ9BVM4 153 aa10.4□□□□□ -0.74
NUP58-214ENST00000495460 MRPL18Q9H0U6 180 aaKnown RBP10.4□□□□□ -0.74
NUP58-214ENST00000495460 ZNF331Q9NQX6 463 aaPredicted RBP10.4□□□□□ -0.74
NUP58-214ENST00000495460 MRPS16Q9Y3D3 137 aaKnown RBP10.4□□□□□ -0.74
NUP58-214ENST00000495460 HERC1Q15751 4861 aa10.4□□□□□ -0.74
NUP58-214ENST00000495460 ZNF701M0R085 212 aaPredicted RBP10.39□□□□□ -0.75
NUP58-214ENST00000495460 LINC00869P0C866 280 aa10.39□□□□□ -0.75
NUP58-214ENST00000495460 TAS2R30P59541 319 aa10.39□□□□□ -0.75
NUP58-214ENST00000495460 TEPPQ6URK8 271 aa10.39□□□□□ -0.75
NUP58-214ENST00000495460 TMEM14EPQ6UXP3 125 aa10.39□□□□□ -0.75
NUP58-214ENST00000495460 TRAV26-1A0A087WT03 109 aa10.38□□□□□ -0.75
NUP58-214ENST00000495460 PPP1R1AQ13522 171 aa10.38□□□□□ -0.75
NUP58-214ENST00000495460 ESRGQ1W209 222 aa10.38□□□□□ -0.75
NUP58-214ENST00000495460 PATE2Q6UY27 113 aa10.38□□□□□ -0.75
NUP58-214ENST00000495460 BPIFA4PQ86YQ2 179 aa10.38□□□□□ -0.75
NUP58-214ENST00000495460 KRTAP1-5Q9BYS1 174 aa10.38□□□□□ -0.75
NUP58-214ENST00000495460 A6NHS1 94 aa10.37□□□□□ -0.75
NUP58-214ENST00000495460 RLN2P04090 185 aa10.37□□□□□ -0.75
NUP58-214ENST00000495460 HOXB5P09067 269 aa10.37□□□□□ -0.75
NUP58-214ENST00000495460 OR5G3P0C626 314 aa10.37□□□□□ -0.75
NUP58-214ENST00000495460 OR5I1Q13606 314 aa10.37□□□□□ -0.75
NUP58-214ENST00000495460 PYGO2Q9BRQ0 406 aa10.37□□□□□ -0.75
NUP58-214ENST00000495460 ARL6Q9H0F7 186 aa10.37□□□□□ -0.75
NUP58-214ENST00000495460 ARV1Q9H2C2 271 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms