RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 H3BQ15 152 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 DEFB4AO15263 64 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 RBMY1A1P0DJD3 496 aaKnown RBP10.41□□□□□ -0.74
SCAP-213ENST00000494938 RBMY1CP0DJD4 496 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 IGLC2P0DOY2 106 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 RPL12P30050 165 aaKnown RBP10.41□□□□□ -0.74
SCAP-213ENST00000494938 FXYD7P58549 80 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 NUTF2P61970 127 aaKnown RBP10.41□□□□□ -0.74
SCAP-213ENST00000494938 RBMY1FQ15415 496 aaKnown RBP10.41□□□□□ -0.74
SCAP-213ENST00000494938 GCSAMLQ5JQS6 135 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 BPIFA4PQ86YQ2 179 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 Q8NAQ8 132 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 OR4B1Q8NGF8 309 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 WDR61Q9GZS3 305 aaKnown RBP10.41□□□□□ -0.74
SCAP-213ENST00000494938 MED28Q9H204 178 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 MBD2Q9UBB5 411 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 HSPB11Q9Y547 144 aa10.41□□□□□ -0.74
SCAP-213ENST00000494938 ZNF705DP0CH99 300 aaPredicted RBP10.4□□□□□ -0.74
SCAP-213ENST00000494938 ZNF705BP0CI00 300 aaPredicted RBP10.4□□□□□ -0.74
SCAP-213ENST00000494938 PET100P0DJ07 73 aa10.4□□□□□ -0.74
SCAP-213ENST00000494938 PSG9Q00887 426 aa10.4□□□□□ -0.74
SCAP-213ENST00000494938 PSG3Q16557 428 aa10.4□□□□□ -0.74
SCAP-213ENST00000494938 AMTNQ6UX39 209 aa10.4□□□□□ -0.74
SCAP-213ENST00000494938 SAT2Q96F10 170 aaPredicted RBP10.4□□□□□ -0.74
SCAP-213ENST00000494938 PFDN5Q99471 154 aa10.4□□□□□ -0.74
SCAP-213ENST00000494938 C1QTNF4Q9BXJ3 329 aa10.4□□□□□ -0.74
SCAP-213ENST00000494938 SLC35B3Q9H1N7 401 aa10.4□□□□□ -0.74
SCAP-213ENST00000494938 C11orf68Q9H3H3 251 aaKnown RBP10.4□□□□□ -0.74
SCAP-213ENST00000494938 WFDC1Q9HC57 220 aa10.4□□□□□ -0.74
SCAP-213ENST00000494938 ZNF331Q9NQX6 463 aaPredicted RBP10.4□□□□□ -0.74
SCAP-213ENST00000494938 IGHV4-28A0A0C4DH34 117 aa10.39□□□□□ -0.75
SCAP-213ENST00000494938 H3BTX0 84 aa10.39□□□□□ -0.75
SCAP-213ENST00000494938 OXA1LQ15070 435 aa10.39□□□□□ -0.75
SCAP-213ENST00000494938 RGS21Q2M5E4 152 aa10.39□□□□□ -0.75
SCAP-213ENST00000494938 Q5BKY6 102 aa10.39□□□□□ -0.75
SCAP-213ENST00000494938 LRRC20Q8TCA0 184 aa10.39□□□□□ -0.75
SCAP-213ENST00000494938 ATP5SQ99766 215 aa10.39□□□□□ -0.75
SCAP-213ENST00000494938 HRH4Q9H3N8 390 aa10.39□□□□□ -0.75
SCAP-213ENST00000494938 SLC17A3O00476 420 aa10.38□□□□□ -0.75
SCAP-213ENST00000494938 PRB4P10163 310 aaPredicted RBP10.38□□□□□ -0.75
SCAP-213ENST00000494938 MIFP14174 115 aa10.38□□□□□ -0.75
SCAP-213ENST00000494938 CXCL2P19875 107 aa10.38□□□□□ -0.75
SCAP-213ENST00000494938 CNN1P51911 297 aaKnown RBP10.38□□□□□ -0.75
SCAP-213ENST00000494938 ZNF705AQ6ZN79 300 aaPredicted RBP10.38□□□□□ -0.75
SCAP-213ENST00000494938 ZNF738Q8NE65 137 aa10.38□□□□□ -0.75
SCAP-213ENST00000494938 SMIM3Q9BZL3 60 aa10.38□□□□□ -0.75
SCAP-213ENST00000494938 ZNF586Q9NXT0 402 aa10.38□□□□□ -0.75
SCAP-213ENST00000494938 ALMS1Q8TCU4 4167 aa10.38□□□□□ -0.75
SCAP-213ENST00000494938 ZNF705FA8MVS1 300 aaPredicted RBP10.37□□□□□ -0.75
SCAP-213ENST00000494938 DUSP14O95147 198 aaKnown RBP10.37□□□□□ -0.75
SCAP-213ENST00000494938 NANOS2P60321 138 aaKnown RBP10.37□□□□□ -0.75
SCAP-213ENST00000494938 PMS2P11Q13670 270 aa10.37□□□□□ -0.75
SCAP-213ENST00000494938 LCN15Q6UWW0 184 aa10.37□□□□□ -0.75
SCAP-213ENST00000494938 C1orf158Q8N1D5 194 aa10.37□□□□□ -0.75
SCAP-213ENST00000494938 OR8A1Q8NGG7 326 aa10.37□□□□□ -0.75
SCAP-213ENST00000494938 FAM167A-AS1Q96KT0 104 aa10.37□□□□□ -0.75
SCAP-213ENST00000494938 TMEM14CQ9P0S9 112 aa10.37□□□□□ -0.75
SCAP-213ENST00000494938 CXorf65A6NEN9 183 aa10.36□□□□□ -0.75
SCAP-213ENST00000494938 PRAC2D3DTV9 90 aa10.36□□□□□ -0.75
SCAP-213ENST00000494938 GUK1Q16774 197 aa10.36□□□□□ -0.75
SCAP-213ENST00000494938 CEMP1Q6PRD7 247 aaPredicted RBP10.36□□□□□ -0.75
SCAP-213ENST00000494938 MIR17HGQ75NE6 70 aa10.36□□□□□ -0.75
SCAP-213ENST00000494938 C11orf45Q8TAV5 145 aa10.36□□□□□ -0.75
SCAP-213ENST00000494938 RPUSD4Q96CM3 377 aaKnown RBP10.36□□□□□ -0.75
SCAP-213ENST00000494938 NEU1Q99519 415 aa10.36□□□□□ -0.75
SCAP-213ENST00000494938 SLC50A1Q9BRV3 221 aa10.36□□□□□ -0.75
SCAP-213ENST00000494938 MFFQ9GZY8 342 aa10.36□□□□□ -0.75
SCAP-213ENST00000494938 RFNGQ9Y644 331 aa10.36□□□□□ -0.75
SCAP-213ENST00000494938 TRBV19A0A075B6N1 114 aa10.35□□□□□ -0.75
SCAP-213ENST00000494938 CRXO43186 299 aaPredicted RBP10.35□□□□□ -0.75
SCAP-213ENST00000494938 NDUFB4O95168 129 aa10.35□□□□□ -0.75
SCAP-213ENST00000494938 GIPP09681 153 aaPredicted RBP10.35□□□□□ -0.75
SCAP-213ENST00000494938 HIST1H1EP10412 219 aaKnown RBP10.35□□□□□ -0.75
SCAP-213ENST00000494938 SLC25A2Q9BXI2 301 aa10.35□□□□□ -0.75
SCAP-213ENST00000494938 PARD6GQ9BYG4 376 aaPredicted RBP10.35□□□□□ -0.75
SCAP-213ENST00000494938 VPS13DQ5THJ4 4388 aa10.34□□□□□ -0.75
SCAP-213ENST00000494938 LCE6AA0A183 80 aa10.34□□□□□ -0.75
SCAP-213ENST00000494938 C17orf112F2Z3M2 114 aa10.34□□□□□ -0.75
SCAP-213ENST00000494938 IFNA5P01569 189 aa10.34□□□□□ -0.75
SCAP-213ENST00000494938 PYYP10082 97 aa10.34□□□□□ -0.75
SCAP-213ENST00000494938 HIST1H1AQ02539 215 aaPredicted RBP10.34□□□□□ -0.75
SCAP-213ENST00000494938 SCGB1C1Q8TD33 95 aa10.34□□□□□ -0.75
SCAP-213ENST00000494938 PHLDA1Q8WV24 401 aaPredicted RBP10.34□□□□□ -0.75
SCAP-213ENST00000494938 IGF2BP2-AS1Q96M15 143 aa10.34□□□□□ -0.75
SCAP-213ENST00000494938 HYDINQ4G0P3 5121 aa10.34□□□□□ -0.75
SCAP-213ENST00000494938 IGHV3OR16-12A0A075B7B8 117 aa10.33□□□□□ -0.76
SCAP-213ENST00000494938 SMIM9A6NGZ8 99 aa10.33□□□□□ -0.76
SCAP-213ENST00000494938 M0R2Z0 102 aa10.33□□□□□ -0.76
SCAP-213ENST00000494938 ZNF253O75346 499 aa10.33□□□□□ -0.76
SCAP-213ENST00000494938 SPINK13Q1W4C9 94 aa10.33□□□□□ -0.76
SCAP-213ENST00000494938 FFAR4Q5NUL3 377 aa10.33□□□□□ -0.76
SCAP-213ENST00000494938 ASB13Q8WXK3 278 aa10.33□□□□□ -0.76
SCAP-213ENST00000494938 AQP10Q96PS8 301 aa10.33□□□□□ -0.76
SCAP-213ENST00000494938 KCNIP2Q9NS61 270 aa10.33□□□□□ -0.76
SCAP-213ENST00000494938 FUT9Q9Y231 359 aa10.33□□□□□ -0.76
SCAP-213ENST00000494938 NUPR2A6NF83 97 aa10.32□□□□□ -0.76
SCAP-213ENST00000494938 AMBPP02760 352 aa10.32□□□□□ -0.76
SCAP-213ENST00000494938 RHOBP62745 196 aa10.32□□□□□ -0.76
SCAP-213ENST00000494938 ZNF503Q96F45 646 aa10.32□□□□□ -0.76
SCAP-213ENST00000494938 MRPL32Q9BYC8 188 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms