RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ZNF320A2RRD8 509 aa12.75□□□□□ -0.37
ATG4B-225ENST00000494465 BUB3O43684 328 aa12.75□□□□□ -0.37
ATG4B-225ENST00000494465 S100A6P06703 90 aa12.75□□□□□ -0.37
ATG4B-225ENST00000494465 OR8I2Q8N0Y5 310 aa12.75□□□□□ -0.37
ATG4B-225ENST00000494465 SMIM12Q96EX1 92 aa12.75□□□□□ -0.37
ATG4B-225ENST00000494465 TRAV8-1A0A0A6YYK1 113 aa12.74□□□□□ -0.37
ATG4B-225ENST00000494465 TRBV12-3P01733 135 aa12.74□□□□□ -0.37
ATG4B-225ENST00000494465 RELQ04864 619 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-225ENST00000494465 GOLT1AQ6ZVE7 132 aa12.74□□□□□ -0.37
ATG4B-225ENST00000494465 FAM231DQ6ZW35 169 aa12.74□□□□□ -0.37
ATG4B-225ENST00000494465 CMTM2Q8TAZ6 248 aa12.74□□□□□ -0.37
ATG4B-225ENST00000494465 USMG5Q96IX5 58 aa12.74□□□□□ -0.37
ATG4B-225ENST00000494465 PRDM13Q9H4Q3 707 aa12.74□□□□□ -0.37
ATG4B-225ENST00000494465 UBE2CO00762 179 aa12.74□□□□□ -0.37
ATG4B-225ENST00000494465 TRGC1P0CF51 173 aa12.74□□□□□ -0.37
ATG4B-225ENST00000494465 VPREB3Q9UKI3 123 aa12.74□□□□□ -0.37
ATG4B-225ENST00000494465 M0R3E3 92 aa12.73□□□□□ -0.37
ATG4B-225ENST00000494465 RPEL1Q2QD12 228 aa12.73□□□□□ -0.37
ATG4B-225ENST00000494465 LCNL1Q6ZST4 164 aa12.73□□□□□ -0.37
ATG4B-225ENST00000494465 CCDC168Q8NDH2 2452 aa12.73□□□□□ -0.37
ATG4B-225ENST00000494465 TRAV9-1A0A075B6T8 112 aa12.73□□□□□ -0.37
ATG4B-225ENST00000494465 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.73□□□□□ -0.37
ATG4B-225ENST00000494465 APOHP02749 345 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-225ENST00000494465 PF4V1P10720 104 aa12.73□□□□□ -0.37
ATG4B-225ENST00000494465 Q71RC1 249 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-225ENST00000494465 Q86TA4 180 aa12.73□□□□□ -0.37
ATG4B-225ENST00000494465 ITPR2Q14571 2701 aa12.73□□□□□ -0.37
ATG4B-225ENST00000494465 TRBV6-1A0A0K0K1D8 114 aa12.72□□□□□ -0.37
ATG4B-225ENST00000494465 DIRC3C9JPN6 131 aa12.72□□□□□ -0.37
ATG4B-225ENST00000494465 S100A7P31151 101 aa12.72□□□□□ -0.37
ATG4B-225ENST00000494465 ARL3P36405 182 aa12.72□□□□□ -0.37
ATG4B-225ENST00000494465 FABP9Q0Z7S8 132 aa12.72□□□□□ -0.37
ATG4B-225ENST00000494465 ACTL10Q5JWF8 245 aa12.72□□□□□ -0.37
ATG4B-225ENST00000494465 LINC00322Q6ZN03 302 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-225ENST00000494465 NUDT10Q8NFP7 164 aa12.72□□□□□ -0.37
ATG4B-225ENST00000494465 NUDT11Q96G61 164 aa12.72□□□□□ -0.37
ATG4B-225ENST00000494465 BTF3L4Q96K17 158 aa12.72□□□□□ -0.37
ATG4B-225ENST00000494465 U3KQE9 123 aa12.72□□□□□ -0.37
ATG4B-225ENST00000494465 PRB4P10163 310 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-225ENST00000494465 SMIM27A0A1W2PRY6 76 aa12.71□□□□□ -0.37
ATG4B-225ENST00000494465 IGHV3-11P01762 117 aa12.71□□□□□ -0.37
ATG4B-225ENST00000494465 RAB9AP51151 201 aa12.71□□□□□ -0.37
ATG4B-225ENST00000494465 TMEM75Q8N9X5 138 aa12.71□□□□□ -0.37
ATG4B-225ENST00000494465 ZNF705GA8MUZ8 300 aaPredicted RBP12.71□□□□□ -0.38
ATG4B-225ENST00000494465 HOXA3O43365 443 aaPredicted RBP12.71□□□□□ -0.38
ATG4B-225ENST00000494465 ZNF207O43670 478 aaKnown RBP12.71□□□□□ -0.38
ATG4B-225ENST00000494465 ZNF253O75346 499 aa12.71□□□□□ -0.38
ATG4B-225ENST00000494465 CA1P00915 261 aaPredicted RBP12.71□□□□□ -0.38
ATG4B-225ENST00000494465 IGHG4P01861 327 aa12.71□□□□□ -0.38
ATG4B-225ENST00000494465 PSG9Q00887 426 aa12.71□□□□□ -0.38
ATG4B-225ENST00000494465 PRR27Q6MZM9 219 aa12.71□□□□□ -0.38
ATG4B-225ENST00000494465 AAMDCQ9H7C9 122 aa12.71□□□□□ -0.38
ATG4B-225ENST00000494465 AKAP9Q99996 3911 aa12.71□□□□□ -0.38
ATG4B-225ENST00000494465 TLN2Q9Y4G6 2542 aa12.71□□□□□ -0.38
ATG4B-225ENST00000494465 FLNAP21333 2647 aaKnown RBP12.7□□□□□ -0.38
ATG4B-225ENST00000494465 A0A087X0K7 114 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 IGHV3-66A0A0C4DH42 116 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 PSMB8P28062 276 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 TMEM183AQ8IXX5 376 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 METTL26Q96S19 204 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 SERTAD4Q9NUC0 356 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 UNC79Q9P2D8 2635 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 GCN1Q92616 2671 aaKnown RBP12.7□□□□□ -0.38
ATG4B-225ENST00000494465 ZNF785A8K8V0 405 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 FRMD6-AS1P0C7T7 363 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 NDUFA6P56556 154 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 C1orf194Q5T5A4 169 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 UNQ9165/PRO28630Q6UXU0 137 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 PRNTQ86SH4 94 aa12.7□□□□□ -0.38
ATG4B-225ENST00000494465 ZNF331Q9NQX6 463 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-225ENST00000494465 IGHV3OR16-13A0A075B7E8 117 aa12.69□□□□□ -0.38
ATG4B-225ENST00000494465 IGHV3-49A0A0A0MS15 119 aa12.69□□□□□ -0.38
ATG4B-225ENST00000494465 IGHV3-74A0A0B4J1X5 117 aa12.69□□□□□ -0.38
ATG4B-225ENST00000494465 C19orf71A6NCJ1 209 aa12.69□□□□□ -0.38
ATG4B-225ENST00000494465 PSG3Q16557 428 aa12.69□□□□□ -0.38
ATG4B-225ENST00000494465 C10orf99Q6UWK7 81 aa12.69□□□□□ -0.38
ATG4B-225ENST00000494465 OR4X2Q8NGF9 303 aa12.69□□□□□ -0.38
ATG4B-225ENST00000494465 GATCO43716 136 aaKnown RBP12.69□□□□□ -0.38
ATG4B-225ENST00000494465 IGFL4Q6B9Z1 124 aa12.69□□□□□ -0.38
ATG4B-225ENST00000494465 PRSS22Q9GZN4 317 aa12.69□□□□□ -0.38
ATG4B-225ENST00000494465 ZNF702PQ9H963 129 aa12.69□□□□□ -0.38
ATG4B-225ENST00000494465 ZNF492Q9P255 531 aa12.69□□□□□ -0.38
ATG4B-225ENST00000494465 A0A0G2JLM5 398 aa12.68□□□□□ -0.38
ATG4B-225ENST00000494465 NDUFA4O00483 81 aa12.68□□□□□ -0.38
ATG4B-225ENST00000494465 SMAD7O15105 426 aaKnown RBP12.68□□□□□ -0.38
ATG4B-225ENST00000494465 HOXA5P20719 270 aa12.68□□□□□ -0.38
ATG4B-225ENST00000494465 HLA-DMBP28068 263 aa12.68□□□□□ -0.38
ATG4B-225ENST00000494465 TCL1AP56279 114 aa12.68□□□□□ -0.38
ATG4B-225ENST00000494465 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.68□□□□□ -0.38
ATG4B-225ENST00000494465 ARL6IP6Q8N6S5 226 aa12.68□□□□□ -0.38
ATG4B-225ENST00000494465 PSG8Q9UQ74 426 aa12.68□□□□□ -0.38
ATG4B-225ENST00000494465 IL17RELQ6ZVW7 336 aa12.67□□□□□ -0.38
ATG4B-225ENST00000494465 GRAMD2BQ96HH9 432 aa12.67□□□□□ -0.38
ATG4B-225ENST00000494465 ASCL2Q99929 193 aa12.67□□□□□ -0.38
ATG4B-225ENST00000494465 K7EQM0 130 aa12.67□□□□□ -0.38
ATG4B-225ENST00000494465 AKR1D1P51857 326 aa12.67□□□□□ -0.38
ATG4B-225ENST00000494465 TRAPPC1Q9Y5R8 145 aa12.67□□□□□ -0.38
ATG4B-225ENST00000494465 ZFP30Q9Y2G7 519 aa12.66□□□□□ -0.38
ATG4B-225ENST00000494465 KRTAP1-1Q07627 177 aa12.66□□□□□ -0.38
ATG4B-225ENST00000494465 C16orf54Q6UWD8 224 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms