RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 NUTF2P61970 127 aaKnown RBP3.62□□□□□ -1.83
PTCD3-219ENST00000494323 LSM3P62310 102 aaKnown RBP3.62□□□□□ -1.83
PTCD3-219ENST00000494323 SP6Q3SY56 376 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 GDF5OSQ5U4N7 250 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 LPCAT3Q6P1A2 487 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 SLC35G3Q8N808 338 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 OR4X1Q8NH49 305 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 Q8WTZ3 238 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 FCGR1BQ92637 280 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 NARS2Q96I59 477 aaKnown RBP3.62□□□□□ -1.83
PTCD3-219ENST00000494323 LINC00052Q96N35 136 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 PARLQ9H300 379 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 VCX3AQ9NNX9 186 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 ENY2Q9NPA8 101 aa3.62□□□□□ -1.83
PTCD3-219ENST00000494323 A0A0G2JRQ6 117 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 NOL3O60936 208 aaKnown RBP3.61□□□□□ -1.83
PTCD3-219ENST00000494323 ID1P41134 155 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 EIF2B2P49770 351 aaKnown RBP3.61□□□□□ -1.83
PTCD3-219ENST00000494323 RND2P52198 227 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 AKR1C2P52895 323 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 PIGPP57054 158 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 GABARAPL2P60520 117 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 SNRPD3P62318 126 aaKnown RBP3.61□□□□□ -1.83
PTCD3-219ENST00000494323 NEDD8Q15843 81 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 RNF212Q495C1 297 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 KCTD21Q4G0X4 260 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 SOHLH1Q5JUK2 328 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 UBE2NLQ5JXB2 153 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 FAM222AQ5U5X8 452 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 FAAP20Q6NZ36 180 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 PRSS54Q6PEW0 395 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 ZNF705AQ6ZN79 300 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-219ENST00000494323 SNX29P2Q8IUI4 249 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 OR4B1Q8NGF8 309 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 LINC00479Q96M42 142 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 TP53RKQ96S44 253 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 NIPSNAP3BQ9BS92 247 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 PDCD10Q9BUL8 212 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 MRPS26Q9BYN8 205 aaKnown RBP3.61□□□□□ -1.83
PTCD3-219ENST00000494323 ANAPC10Q9UM13 185 aa3.61□□□□□ -1.83
PTCD3-219ENST00000494323 TRAV30A0A087WSZ9 112 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 A0A087WXM4 84 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 C3orf85A0A1B0GTC6 90 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 SMIM31A0A1B0GVY4 71 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 SMIM9A6NGZ8 99 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 ZNF705FA8MVS1 300 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-219ENST00000494323 F6UB75 175 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 INS-IGF2F8WCM5 200 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 CORTO00230 105 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 IL4P05112 153 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 P0C879 139 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 IGLC1P0CG04 106 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 ZNF705DP0CH99 300 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-219ENST00000494323 ZNF705BP0CI00 300 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-219ENST00000494323 RD3LP0DJH9 198 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 HLA-DRB4P13762 266 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 OR10J1P30954 320 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 RPL5P46777 297 aaKnown RBP3.6□□□□□ -1.83
PTCD3-219ENST00000494323 YPEL3P61236 119 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-219ENST00000494323 FCN2Q15485 313 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 USF2Q15853 346 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-219ENST00000494323 TRIM16LQ309B1 348 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 ERASQ7Z444 233 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 LINC00518Q8N0U6 118 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 C1orf158Q8N1D5 194 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 OR51G1Q8NGK1 321 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 GPX8Q8TED1 209 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 ACY3Q96HD9 319 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 FAM210BQ96KR6 192 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 C7orf50Q9BRJ6 194 aaKnown RBP3.6□□□□□ -1.83
PTCD3-219ENST00000494323 SLC35B3Q9H1N7 401 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 NRN1Q9NPD7 142 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-219ENST00000494323 COMMD3Q9UBI1 195 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 YTHDF2Q9Y5A9 579 aaKnown RBP3.6□□□□□ -1.83
PTCD3-219ENST00000494323 RFNGQ9Y644 331 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 HLA-DRB4X5D2U9 266 aa3.6□□□□□ -1.83
PTCD3-219ENST00000494323 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 TMEM189A5PLL7 270 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 CEBPZOSA8MTT3 80 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 ZNF705GA8MUZ8 300 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-219ENST00000494323 ATG12O94817 140 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 DEFB130BP0DP73 79 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 DEFB130AP0DP74 79 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 ELK1P19419 428 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 RCVRNP35243 200 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 HTR2BP41595 481 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 SPCS3P61009 180 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 DAD1P61803 113 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 BSXQ3C1V8 233 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 FAM78BQ5VT40 261 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 ZNF709Q8N972 641 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 OR1S2Q8NGQ3 325 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 RNASE11Q8TAA1 199 aaKnown RBP3.59□□□□□ -1.83
PTCD3-219ENST00000494323 PBDC1Q9BVG4 233 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 SAV1Q9H4B6 383 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-219ENST00000494323 Q9HAA7 133 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 COPZ2Q9P299 210 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 MBD2Q9UBB5 411 aa3.59□□□□□ -1.83
PTCD3-219ENST00000494323 DNAH11Q96DT5 4516 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms