RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 CCL24O00175 119 aa9.6□□□□□ -0.87
VPS52-220ENST00000493674 C10orf91Q5T1B1 145 aa9.6□□□□□ -0.87
VPS52-220ENST00000493674 SIGLEC15Q6ZMC9 328 aa9.6□□□□□ -0.87
VPS52-220ENST00000493674 ADAMTSL5Q6ZMM2 481 aa9.6□□□□□ -0.87
VPS52-220ENST00000493674 DPF1Q92782 380 aa9.6□□□□□ -0.87
VPS52-220ENST00000493674 C11orf52Q96A22 123 aa9.6□□□□□ -0.87
VPS52-220ENST00000493674 NARS2Q96I59 477 aaKnown RBP9.6□□□□□ -0.87
VPS52-220ENST00000493674 DUX3Q96PT4 197 aa9.6□□□□□ -0.87
VPS52-220ENST00000493674 RHPN1-AS1Q9BWJ2 59 aa9.6□□□□□ -0.87
VPS52-220ENST00000493674 NKX6-2Q9C056 277 aaPredicted RBP9.6□□□□□ -0.87
VPS52-220ENST00000493674 IGHV3OR16-13A0A075B7E8 117 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 IGHV3-49A0A0A0MS15 119 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 IGHV3-74A0A0B4J1X5 117 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 IGHV3-66A0A0C4DH42 116 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 A0A1W2PRX2 142 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 SLC17A3O00476 420 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 ADCYAP1P18509 176 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 GALR1P47211 349 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 MEOX2P50222 304 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 FAM90A2PQ658T7 463 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 C12orf54Q6X4T0 127 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 LYPD1Q8N2G4 141 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 DLX4Q92988 240 aaPredicted RBP9.59□□□□□ -0.87
VPS52-220ENST00000493674 GRAMD2BQ96HH9 432 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 TCEAL7Q9BRU2 100 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 ELOVL1Q9BW60 279 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 SLC35B3Q9H1N7 401 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 TREM1Q9NP99 234 aa9.59□□□□□ -0.87
VPS52-220ENST00000493674 KRBOX1C9JBD0 128 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 F6UZH7 168 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 PDE6DO43924 150 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 SFTA3P0C7M3 94 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 ATF4P18848 351 aaPredicted RBP9.58□□□□□ -0.88
VPS52-220ENST00000493674 CBLN1P23435 193 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 BMI1P35226 326 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 CST9LP1Q5W188 147 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 CYB561D1Q8N8Q1 229 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 OR9G4Q8NGQ1 327 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 BLNKQ8WV28 456 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 LINC00052Q96N35 136 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 Q9H3A6 140 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 OTORQ9NRC9 128 aa9.58□□□□□ -0.88
VPS52-220ENST00000493674 HELTA6NFD8 242 aa9.57□□□□□ -0.88
VPS52-220ENST00000493674 H3BTX0 84 aa9.57□□□□□ -0.88
VPS52-220ENST00000493674 SOCS3O14543 225 aa9.57□□□□□ -0.88
VPS52-220ENST00000493674 CSN3P07498 182 aa9.57□□□□□ -0.88
VPS52-220ENST00000493674 SNRPCP09234 159 aaKnown RBP9.57□□□□□ -0.88
VPS52-220ENST00000493674 ARL6IP6Q8N6S5 226 aa9.57□□□□□ -0.88
VPS52-220ENST00000493674 SEC11CQ9BY50 192 aa9.57□□□□□ -0.88
VPS52-220ENST00000493674 ZNF331Q9NQX6 463 aaPredicted RBP9.57□□□□□ -0.88
VPS52-220ENST00000493674 SIGLEC8Q9NYZ4 499 aa9.57□□□□□ -0.88
VPS52-220ENST00000493674 PEMTQ9UBM1 199 aa9.57□□□□□ -0.88
VPS52-220ENST00000493674 CARHSP1Q9Y2V2 147 aaKnown RBP9.57□□□□□ -0.88
VPS52-220ENST00000493674 SORL1Q92673 2214 aa9.57□□□□□ -0.88
VPS52-220ENST00000493674 SCO2A0A1W2PP80 73 aa9.56□□□□□ -0.88
VPS52-220ENST00000493674 FOLR2P14207 255 aa9.56□□□□□ -0.88
VPS52-220ENST00000493674 RANP62826 216 aaKnown RBP9.56□□□□□ -0.88
VPS52-220ENST00000493674 SUMO1P63165 101 aaKnown RBP9.56□□□□□ -0.88
VPS52-220ENST00000493674 PSG9Q00887 426 aa9.56□□□□□ -0.88
VPS52-220ENST00000493674 NSUN5P1Q3KNT7 163 aa9.56□□□□□ -0.88
VPS52-220ENST00000493674 C5orf17Q8NAS9 161 aa9.56□□□□□ -0.88
VPS52-220ENST00000493674 C2CD4CQ8TF44 421 aa9.56□□□□□ -0.88
VPS52-220ENST00000493674 SLC50A1Q9BRV3 221 aa9.56□□□□□ -0.88
VPS52-220ENST00000493674 MLXQ9UH92 298 aa9.56□□□□□ -0.88
VPS52-220ENST00000493674 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
VPS52-220ENST00000493674 OVOL1O14753 267 aa9.55□□□□□ -0.88
VPS52-220ENST00000493674 TCF24Q7RTU0 167 aa9.55□□□□□ -0.88
VPS52-220ENST00000493674 NRN1Q9NPD7 142 aa9.55□□□□□ -0.88
VPS52-220ENST00000493674 AGRNO00468 2067 aa9.55□□□□□ -0.88
VPS52-220ENST00000493674 PGPA6NDG6 321 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 ZNF785A8K8V0 405 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 PEX7O00628 323 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 SOHLH1Q5JUK2 328 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 EXOC3-AS1Q8N2X6 119 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 C3orf56Q8N813 242 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 LINC00482Q8N8I6 264 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 HIST1H2BAQ96A08 127 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 MRPL53Q96EL3 112 aaKnown RBP9.54□□□□□ -0.88
VPS52-220ENST00000493674 ZNF747Q9BV97 191 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 PARLQ9H300 379 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 EPDR1Q9UM22 224 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 KLF12Q9Y4X4 402 aa9.54□□□□□ -0.88
VPS52-220ENST00000493674 F8W036 122 aa9.53□□□□□ -0.88
VPS52-220ENST00000493674 M0QZ24 198 aa9.53□□□□□ -0.88
VPS52-220ENST00000493674 TCRAP04437 139 aa9.53□□□□□ -0.88
VPS52-220ENST00000493674 SLC25A5P05141 298 aaKnown RBP9.53□□□□□ -0.88
VPS52-220ENST00000493674 FAM74A3Q4VXF1 159 aa9.53□□□□□ -0.88
VPS52-220ENST00000493674 DCANP1Q8TF63 244 aa9.53□□□□□ -0.88
VPS52-220ENST00000493674 RPUSD4Q96CM3 377 aaKnown RBP9.53□□□□□ -0.88
VPS52-220ENST00000493674 ATG101Q9BSB4 218 aa9.53□□□□□ -0.88
VPS52-220ENST00000493674 DERL1Q9BUN8 251 aa9.53□□□□□ -0.88
VPS52-220ENST00000493674 AAMDCQ9H7C9 122 aa9.53□□□□□ -0.88
VPS52-220ENST00000493674 CLEC5AQ9NY25 188 aa9.53□□□□□ -0.88
VPS52-220ENST00000493674 PRELID1Q9Y255 219 aa9.53□□□□□ -0.88
VPS52-220ENST00000493674 TRBV20OR9-2A0A075B6H5 130 aa9.52□□□□□ -0.89
VPS52-220ENST00000493674 TRAV2A0A0B4J234 112 aa9.52□□□□□ -0.89
VPS52-220ENST00000493674 C9JCJ5 164 aa9.52□□□□□ -0.89
VPS52-220ENST00000493674 M0R3E3 92 aa9.52□□□□□ -0.89
VPS52-220ENST00000493674 ISLRO14498 428 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms