RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 NXPH4O95158 308 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 CDS2O95674 445 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 PLA2G1BP04054 148 aaKnown RBP8.2□□□□□ -1.1
GPNMB-214ENST00000492858 GAGE12FP0CL80 117 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 GAGE12GP0CL81 117 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 GAGE12IP0CL82 117 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 GALR1P47211 349 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 DEFA1P59665 94 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 DEFA3P59666 94 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 AARDQ4LEZ3 155 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 TMEM128Q5BJH2 165 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 IGFL4Q6B9Z1 124 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 ZNF493Q6ZR52 646 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 LINC00612Q8N6U2 182 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 OR52E5Q8NH55 327 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 DEFB104AQ8WTQ1 72 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 GLYATL2Q8WU03 294 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 TMEM263Q8WUH6 116 aaKnown RBP8.2□□□□□ -1.1
GPNMB-214ENST00000492858 RSG1Q9BU20 258 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 C20orf85Q9H1P6 137 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 NAA60Q9H7X0 242 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-214ENST00000492858 FLVCR2Q9UPI3 526 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 TMEM56-RWDD3S4R434 201 aa8.2□□□□□ -1.1
GPNMB-214ENST00000492858 TEX13DA0A0J9YY54 714 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-214ENST00000492858 LINC00854A0A1B0GVQ3 168 aa8.19□□□□□ -1.1
GPNMB-214ENST00000492858 FAM240BA0A1B0GVZ2 78 aa8.19□□□□□ -1.1
GPNMB-214ENST00000492858 IL5P05113 134 aa8.19□□□□□ -1.1
GPNMB-214ENST00000492858 CCDC71LQ8N9Z2 235 aa8.19□□□□□ -1.1
GPNMB-214ENST00000492858 IL22RA2Q969J5 263 aa8.19□□□□□ -1.1
GPNMB-214ENST00000492858 TMEM222Q9H0R3 208 aa8.19□□□□□ -1.1
GPNMB-214ENST00000492858 SLC25A32Q9H2D1 315 aa8.19□□□□□ -1.1
GPNMB-214ENST00000492858 SLC25A22Q9H936 323 aa8.19□□□□□ -1.1
GPNMB-214ENST00000492858 IGKV1D-37A0A075B6S9 117 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 IGLV5-52A0A0A0MRZ9 124 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 A0A0B4J2A0 478 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 SNRPGP15A8MWD9 76 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 SFT2D2O95562 160 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 RHOBP62745 196 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 OR2F1Q13607 317 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 GAMTQ14353 236 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 NMSQ5H8A3 153 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 TMED4Q7Z7H5 227 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 NOXA1Q86UR1 476 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 RNF182Q8N6D2 247 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 LHFPL5Q8TAF8 219 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 VSIG2Q96IQ7 327 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 TMPRSS5Q9H3S3 457 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 CACNG5Q9UF02 275 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 SHPKQ9UHJ6 478 aa8.18□□□□□ -1.1
GPNMB-214ENST00000492858 C14orf166Q9Y224 244 aaKnown RBP8.18□□□□□ -1.1
GPNMB-214ENST00000492858 C9orf170A2RU37 121 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 ZNF98A6NK75 572 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 RLN2P04090 185 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 H2AFB2P0C5Z0 115 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 OR4E1P0C645 316 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 HIST1H1AQ02539 215 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-214ENST00000492858 PPP1R1AQ13522 171 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 FAM219AQ8IW50 185 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 ZNF738Q8NE65 137 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 MITD1Q8WV92 249 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 NUDT15Q9NV35 164 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 PPP1R14DQ9NXH3 145 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 FAM30AQ9NZY2 134 aa8.17□□□□□ -1.1
GPNMB-214ENST00000492858 TRAV8-2A0A0B4J237 113 aa8.16□□□□□ -1.1
GPNMB-214ENST00000492858 DUXBA0A1W2PPF3 345 aa8.16□□□□□ -1.1
GPNMB-214ENST00000492858 C7orf66A4D0T2 115 aa8.16□□□□□ -1.1
GPNMB-214ENST00000492858 FABP1P07148 127 aa8.16□□□□□ -1.1
GPNMB-214ENST00000492858 OR5AC1P0C628 307 aa8.16□□□□□ -1.1
GPNMB-214ENST00000492858 ANXA7P20073 488 aaKnown RBP8.16□□□□□ -1.1
GPNMB-214ENST00000492858 RGS21Q2M5E4 152 aa8.16□□□□□ -1.1
GPNMB-214ENST00000492858 SELENOHQ8IZQ5 122 aaKnown RBP8.16□□□□□ -1.1
GPNMB-214ENST00000492858 ENKURQ8TC29 256 aa8.16□□□□□ -1.1
GPNMB-214ENST00000492858 BOLA1Q9Y3E2 137 aa8.16□□□□□ -1.1
GPNMB-214ENST00000492858 TRAV6A0A075B6T7 132 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 TRAV9-2A0A087WT02 112 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 NPIPB6E9PJ23 425 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 INMT-MINDY4F8WBC2 141 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 H7BYZ3 331 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 PRAF2O60831 178 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 PRB4P10163 310 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-214ENST00000492858 AKR1C4P17516 323 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 FGL1Q08830 312 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 CCDC28AQ8IWP9 274 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 LINC00528Q8N1L1 170 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 SLC35E1Q96K37 410 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 MSRB1Q9NZV6 116 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 KCNIP3Q9Y2W7 256 aa8.15□□□□□ -1.1
GPNMB-214ENST00000492858 PIGBOS1A0A0B4J2F0 54 aa8.14□□□□□ -1.11
GPNMB-214ENST00000492858 SNURFLB1AK76 121 aa8.14□□□□□ -1.11
GPNMB-214ENST00000492858 PITX3O75364 302 aa8.14□□□□□ -1.11
GPNMB-214ENST00000492858 SLC25A6P12236 298 aa8.14□□□□□ -1.11
GPNMB-214ENST00000492858 CDKN1BP46527 198 aa8.14□□□□□ -1.11
GPNMB-214ENST00000492858 SRPXP78539 464 aa8.14□□□□□ -1.11
GPNMB-214ENST00000492858 OR8A1Q8NGG7 326 aa8.14□□□□□ -1.11
GPNMB-214ENST00000492858 OR1B1Q8NGR6 318 aa8.14□□□□□ -1.11
GPNMB-214ENST00000492858 ZNF431Q8TF32 576 aaPredicted RBP8.14□□□□□ -1.11
GPNMB-214ENST00000492858 RBPMSQ93062 196 aaKnown RBP8.14□□□□□ -1.11
GPNMB-214ENST00000492858 U3KQ87 197 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms