RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ZNF493Q6ZR52 646 aa8.84□□□□□ -0.99
COL6A1-205ENST00000492851 Q6ZRG5 221 aa8.84□□□□□ -0.99
COL6A1-205ENST00000492851 RNF182Q8N6D2 247 aa8.84□□□□□ -0.99
COL6A1-205ENST00000492851 UHRF2Q96PU4 802 aa8.84□□□□□ -0.99
COL6A1-205ENST00000492851 LINC01587Q99440 93 aa8.84□□□□□ -0.99
COL6A1-205ENST00000492851 PLA2G2EQ9NZK7 142 aa8.84□□□□□ -0.99
COL6A1-205ENST00000492851 C7orf66A4D0T2 115 aa8.83□□□□□ -1
COL6A1-205ENST00000492851 PRSS29PA6NIE9 313 aa8.83□□□□□ -1
COL6A1-205ENST00000492851 ZNF705GA8MUZ8 300 aaPredicted RBP8.83□□□□□ -1
COL6A1-205ENST00000492851 M0R2Z0 102 aa8.83□□□□□ -1
COL6A1-205ENST00000492851 AGPAT2O15120 278 aa8.83□□□□□ -1
COL6A1-205ENST00000492851 PVALBP20472 110 aaPredicted RBP8.83□□□□□ -1
COL6A1-205ENST00000492851 CDKN1BP46527 198 aa8.83□□□□□ -1
COL6A1-205ENST00000492851 TMEM88Q6PEY1 159 aa8.83□□□□□ -1
COL6A1-205ENST00000492851 PATE2Q6UY27 113 aa8.83□□□□□ -1
COL6A1-205ENST00000492851 LINC00305Q7Z4B0 112 aa8.83□□□□□ -1
COL6A1-205ENST00000492851 RPUSD4Q96CM3 377 aaKnown RBP8.83□□□□□ -1
COL6A1-205ENST00000492851 C20orf144Q9BQM9 153 aa8.83□□□□□ -1
COL6A1-205ENST00000492851 CBY3A6NI87 242 aa8.82□□□□□ -1
COL6A1-205ENST00000492851 M0R2N4 97 aa8.82□□□□□ -1
COL6A1-205ENST00000492851 COX7A2P2O60397 106 aa8.82□□□□□ -1
COL6A1-205ENST00000492851 MBPP02686 304 aaPredicted RBP8.82□□□□□ -1
COL6A1-205ENST00000492851 BTCP35070 178 aa8.82□□□□□ -1
COL6A1-205ENST00000492851 SLC38A11Q08AI6 406 aa8.82□□□□□ -1
COL6A1-205ENST00000492851 GUK1Q16774 197 aa8.82□□□□□ -1
COL6A1-205ENST00000492851 OR1L4Q8NGR5 311 aa8.82□□□□□ -1
COL6A1-205ENST00000492851 C16orf74Q96GX8 76 aa8.82□□□□□ -1
COL6A1-205ENST00000492851 SDHCQ99643 169 aaPredicted RBP8.82□□□□□ -1
COL6A1-205ENST00000492851 C20orf85Q9H1P6 137 aa8.82□□□□□ -1
COL6A1-205ENST00000492851 DNAJC4Q9NNZ3 241 aa8.82□□□□□ -1
COL6A1-205ENST00000492851 ZNF331Q9NQX6 463 aaPredicted RBP8.82□□□□□ -1
COL6A1-205ENST00000492851 RCL1Q9Y2P8 373 aaKnown RBP8.82□□□□□ -1
COL6A1-205ENST00000492851 H7BYZ3 331 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 LYRM1O43325 122 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 CCNKO75909 580 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 ATP5G1P05496 136 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 DEFB130BP0DP73 79 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 DEFB130AP0DP74 79 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 ATP5G3P48201 142 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 CAMLGP49069 296 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 BCAP31P51572 246 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 C10orf113Q5VZT2 155 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 C12orf45Q8N5I9 185 aaPredicted RBP8.81□□□□□ -1
COL6A1-205ENST00000492851 OR10J6PQ8NGY7 276 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 PFDN5Q99471 154 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 ATG101Q9BSB4 218 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 TIMM8BQ9Y5J9 83 aaPredicted RBP8.81□□□□□ -1
COL6A1-205ENST00000492851 PXMP4Q9Y6I8 212 aa8.81□□□□□ -1
COL6A1-205ENST00000492851 HECTD4Q9Y4D8 3996 aa8.8□□□□□ -1
COL6A1-205ENST00000492851 TRAV12-2A0A075B6T6 113 aa8.8□□□□□ -1
COL6A1-205ENST00000492851 C5orf51A6NDU8 294 aa8.8□□□□□ -1
COL6A1-205ENST00000492851 MRPS12O15235 138 aaKnown RBP8.8□□□□□ -1
COL6A1-205ENST00000492851 TCRBP04435 133 aa8.8□□□□□ -1
COL6A1-205ENST00000492851 S100A11P31949 105 aa8.8□□□□□ -1
COL6A1-205ENST00000492851 CAV2P51636 162 aa8.8□□□□□ -1
COL6A1-205ENST00000492851 Q6ZR54 194 aa8.8□□□□□ -1
COL6A1-205ENST00000492851 CCDC28AQ8IWP9 274 aa8.8□□□□□ -1
COL6A1-205ENST00000492851 BAP18Q8IXM2 172 aa8.8□□□□□ -1
COL6A1-205ENST00000492851 ZNF431Q8TF32 576 aaPredicted RBP8.8□□□□□ -1
COL6A1-205ENST00000492851 TMEM37Q8WXS4 190 aa8.8□□□□□ -1
COL6A1-205ENST00000492851 C2orf50Q96LR7 162 aa8.8□□□□□ -1
COL6A1-205ENST00000492851 IGLV2-18A0A075B6J9 118 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 A0A1B0GVY2 172 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 FAM25EA8MYX2 175 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 F5H768 121 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 RTL8CO15255 209 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 PLA2G10O15496 165 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 MED14OSP0DP75 135 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 HTN1P15515 57 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 AZU1P20160 251 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 CCL18P55774 89 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 ARL16Q0P5N6 197 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 C1orf134Q5TEV5 83 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 LINC00299Q6ZSB3 139 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 TMEM263Q8WUH6 116 aaKnown RBP8.79□□□□□ -1
COL6A1-205ENST00000492851 MGST2Q99735 147 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 UQCC1Q9NVA1 299 aa8.79□□□□□ -1
COL6A1-205ENST00000492851 LSM5Q9Y4Y9 91 aaKnown RBP8.79□□□□□ -1
COL6A1-205ENST00000492851 TRAV6A0A075B6T7 132 aa8.78□□□□□ -1
COL6A1-205ENST00000492851 SULT1A1P50225 295 aa8.78□□□□□ -1
COL6A1-205ENST00000492851 HBG1P69891 147 aa8.78□□□□□ -1
COL6A1-205ENST00000492851 HBG2P69892 147 aa8.78□□□□□ -1
COL6A1-205ENST00000492851 ATP6V1FQ16864 119 aa8.78□□□□□ -1
COL6A1-205ENST00000492851 NRARPQ7Z6K4 114 aa8.78□□□□□ -1
COL6A1-205ENST00000492851 STX12Q86Y82 276 aa8.78□□□□□ -1
COL6A1-205ENST00000492851 CHAC2Q8WUX2 184 aa8.78□□□□□ -1
COL6A1-205ENST00000492851 ODF3Q96PU9 254 aa8.78□□□□□ -1
COL6A1-205ENST00000492851 CCDC32Q9BV29 185 aa8.78□□□□□ -1
COL6A1-205ENST00000492851 DNAH6Q9C0G6 4158 aa8.77□□□□□ -1
COL6A1-205ENST00000492851 PLAC8L1A1L4L8 177 aa8.77□□□□□ -1.01
COL6A1-205ENST00000492851 ZNF253O75346 499 aa8.77□□□□□ -1.01
COL6A1-205ENST00000492851 MPDU1O75352 247 aa8.77□□□□□ -1.01
COL6A1-205ENST00000492851 PRM2P04554 102 aa8.77□□□□□ -1.01
COL6A1-205ENST00000492851 H2AFB2P0C5Z0 115 aa8.77□□□□□ -1.01
COL6A1-205ENST00000492851 IGLC2P0DOY2 106 aa8.77□□□□□ -1.01
COL6A1-205ENST00000492851 RPL29P47914 159 aaKnown RBP8.77□□□□□ -1.01
COL6A1-205ENST00000492851 OPCMLQ14982 345 aa8.77□□□□□ -1.01
COL6A1-205ENST00000492851 VWC2Q2TAL6 325 aa8.77□□□□□ -1.01
COL6A1-205ENST00000492851 SAT2Q96F10 170 aaPredicted RBP8.77□□□□□ -1.01
COL6A1-205ENST00000492851 NUDT15Q9NV35 164 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 1683.7 ms