RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 AGPAT2O15120 278 aa12.24□□□□□ -0.45
SGMS1-204ENST00000492601 LYRM1O43325 122 aa12.24□□□□□ -0.45
SGMS1-204ENST00000492601 SNRPCP09234 159 aaKnown RBP12.24□□□□□ -0.45
SGMS1-204ENST00000492601 CXCL3P19876 107 aa12.24□□□□□ -0.45
SGMS1-204ENST00000492601 RHOBP62745 196 aa12.24□□□□□ -0.45
SGMS1-204ENST00000492601 PSG3Q16557 428 aa12.24□□□□□ -0.45
SGMS1-204ENST00000492601 CNPY1Q3B7I2 92 aa12.24□□□□□ -0.45
SGMS1-204ENST00000492601 S100A7AQ86SG5 101 aa12.24□□□□□ -0.45
SGMS1-204ENST00000492601 OR8A1Q8NGG7 326 aa12.24□□□□□ -0.45
SGMS1-204ENST00000492601 FAM210BQ96KR6 192 aa12.24□□□□□ -0.45
SGMS1-204ENST00000492601 PPP1R14DQ9NXH3 145 aa12.24□□□□□ -0.45
SGMS1-204ENST00000492601 BOLA2-SMG1P6H3BVE0 249 aa12.23□□□□□ -0.45
SGMS1-204ENST00000492601 ZNF846Q147U1 533 aa12.23□□□□□ -0.45
SGMS1-204ENST00000492601 TMEM88Q6PEY1 159 aa12.23□□□□□ -0.45
SGMS1-204ENST00000492601 LINC00305Q7Z4B0 112 aa12.23□□□□□ -0.45
SGMS1-204ENST00000492601 ZNF546Q86UE3 836 aa12.23□□□□□ -0.45
SGMS1-204ENST00000492601 LSM5Q9Y4Y9 91 aaKnown RBP12.23□□□□□ -0.45
SGMS1-204ENST00000492601 PKD1P98161 4303 aa12.22□□□□□ -0.45
SGMS1-204ENST00000492601 L7N2F9 121 aa12.22□□□□□ -0.45
SGMS1-204ENST00000492601 MRPS12O15235 138 aaKnown RBP12.22□□□□□ -0.45
SGMS1-204ENST00000492601 TCRBP04435 133 aa12.22□□□□□ -0.45
SGMS1-204ENST00000492601 VAMP2P63027 116 aa12.22□□□□□ -0.45
SGMS1-204ENST00000492601 LINC00336Q6ZUF6 198 aa12.22□□□□□ -0.45
SGMS1-204ENST00000492601 RPUSD4Q96CM3 377 aaKnown RBP12.22□□□□□ -0.45
SGMS1-204ENST00000492601 MGST2Q99735 147 aa12.22□□□□□ -0.45
SGMS1-204ENST00000492601 SEC22CQ9BRL7 303 aa12.22□□□□□ -0.45
SGMS1-204ENST00000492601 IGLV2-18A0A075B6J9 118 aa12.21□□□□□ -0.45
SGMS1-204ENST00000492601 H3BTX0 84 aa12.21□□□□□ -0.45
SGMS1-204ENST00000492601 COX7A2P2O60397 106 aa12.21□□□□□ -0.45
SGMS1-204ENST00000492601 AZU1P20160 251 aa12.21□□□□□ -0.45
SGMS1-204ENST00000492601 BCAP31P51572 246 aa12.21□□□□□ -0.45
SGMS1-204ENST00000492601 PXDC1Q5TGL8 231 aa12.21□□□□□ -0.45
SGMS1-204ENST00000492601 LINC01587Q99440 93 aa12.21□□□□□ -0.45
SGMS1-204ENST00000492601 GGACTQ9BVM4 153 aa12.21□□□□□ -0.45
SGMS1-204ENST00000492601 DYNC1H1Q14204 4646 aaKnown RBP12.2□□□□□ -0.46
SGMS1-204ENST00000492601 C5orf51A6NDU8 294 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 DEFB130BP0DP73 79 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 DEFB130AP0DP74 79 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 HTN1P15515 57 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 CAV2P51636 162 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 B2MP61769 119 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 FCN2Q15485 313 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 MORN5Q5VZ52 161 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 LCN15Q6UWW0 184 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 TMEM37Q8WXS4 190 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 NUDT15Q9NV35 164 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 RNF24Q9Y225 148 aa12.2□□□□□ -0.46
SGMS1-204ENST00000492601 DNAH11Q96DT5 4516 aa12.19□□□□□ -0.46
SGMS1-204ENST00000492601 LYRM9A8MSI8 78 aa12.19□□□□□ -0.46
SGMS1-204ENST00000492601 RTL8CO15255 209 aa12.19□□□□□ -0.46
SGMS1-204ENST00000492601 CST7O76096 145 aa12.19□□□□□ -0.46
SGMS1-204ENST00000492601 ZNF431Q8TF32 576 aaPredicted RBP12.19□□□□□ -0.46
SGMS1-204ENST00000492601 ZNF331Q9NQX6 463 aaPredicted RBP12.19□□□□□ -0.46
SGMS1-204ENST00000492601 PLAC8L1A1L4L8 177 aa12.18□□□□□ -0.46
SGMS1-204ENST00000492601 FAM24AA6NFZ4 105 aa12.18□□□□□ -0.46
SGMS1-204ENST00000492601 PRSS29PA6NIE9 313 aa12.18□□□□□ -0.46
SGMS1-204ENST00000492601 SLC17A3O00476 420 aa12.18□□□□□ -0.46
SGMS1-204ENST00000492601 CXCL2P19875 107 aa12.18□□□□□ -0.46
SGMS1-204ENST00000492601 TSPOP30536 169 aa12.18□□□□□ -0.46
SGMS1-204ENST00000492601 CAMLGP49069 296 aa12.18□□□□□ -0.46
SGMS1-204ENST00000492601 OPCMLQ14982 345 aa12.18□□□□□ -0.46
SGMS1-204ENST00000492601 LGALS9BQ3B8N2 356 aa12.18□□□□□ -0.46
SGMS1-204ENST00000492601 C10orf113Q5VZT2 155 aa12.18□□□□□ -0.46
SGMS1-204ENST00000492601 BPIFA4PQ86YQ2 179 aa12.18□□□□□ -0.46
SGMS1-204ENST00000492601 C12orf45Q8N5I9 185 aaPredicted RBP12.18□□□□□ -0.46
SGMS1-204ENST00000492601 A0A1B0GVY2 172 aa12.17□□□□□ -0.46
SGMS1-204ENST00000492601 PRAC2D3DTV9 90 aa12.17□□□□□ -0.46
SGMS1-204ENST00000492601 S100A10P60903 97 aa12.17□□□□□ -0.46
SGMS1-204ENST00000492601 RNF212Q495C1 297 aa12.17□□□□□ -0.46
SGMS1-204ENST00000492601 MIC13Q5XKP0 118 aa12.17□□□□□ -0.46
SGMS1-204ENST00000492601 NRARPQ7Z6K4 114 aa12.17□□□□□ -0.46
SGMS1-204ENST00000492601 TMEM256Q8N2U0 113 aa12.17□□□□□ -0.46
SGMS1-204ENST00000492601 C2orf50Q96LR7 162 aa12.17□□□□□ -0.46
SGMS1-204ENST00000492601 SLC50A1Q9BRV3 221 aa12.17□□□□□ -0.46
SGMS1-204ENST00000492601 PARD6GQ9BYG4 376 aaPredicted RBP12.17□□□□□ -0.46
SGMS1-204ENST00000492601 C11orf1Q9H5F2 150 aa12.17□□□□□ -0.46
SGMS1-204ENST00000492601 NDUFA13Q9P0J0 144 aa12.17□□□□□ -0.46
SGMS1-204ENST00000492601 MUC4Q99102 2169 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 TRAV5A0A0B4J249 113 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 F5H768 121 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 H2AFB2P0C5Z0 115 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 CDKN1BP46527 198 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 TAS2R60P59551 318 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 RAB31Q13636 194 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 KIR3DS1Q14943 382 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 Q6ZRG5 221 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 KRTAP17-1Q9BYP8 105 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 DNAJC4Q9NNZ3 241 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 UQCC1Q9NVA1 299 aa12.16□□□□□ -0.46
SGMS1-204ENST00000492601 H3BQ15 152 aa12.15□□□□□ -0.46
SGMS1-204ENST00000492601 IGLC2P0DOY2 106 aa12.15□□□□□ -0.46
SGMS1-204ENST00000492601 PVALBP20472 110 aaPredicted RBP12.15□□□□□ -0.46
SGMS1-204ENST00000492601 Q6ZR54 194 aa12.15□□□□□ -0.46
SGMS1-204ENST00000492601 C15orf53Q8NAA6 179 aa12.15□□□□□ -0.46
SGMS1-204ENST00000492601 OR10J6PQ8NGY7 276 aa12.15□□□□□ -0.46
SGMS1-204ENST00000492601 C16orf74Q96GX8 76 aa12.15□□□□□ -0.46
SGMS1-204ENST00000492601 WDR83OSQ9Y284 106 aa12.15□□□□□ -0.46
SGMS1-204ENST00000492601 UBE2L5PA0A1B0GUS4 154 aa12.14□□□□□ -0.47
SGMS1-204ENST00000492601 FAM240BA0A1B0GVZ2 78 aa12.14□□□□□ -0.47
SGMS1-204ENST00000492601 IGSF23A1L1A6 192 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms