RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 PSG3Q16557 428 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 BAK1Q16611 211 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 GUK1Q16774 197 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 SPINK13Q1W4C9 94 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 TMEM182Q6ZP80 229 aaPredicted RBP6.22□□□□□ -1.41
NUP50-217ENST00000491860 Q6ZRG5 221 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 ZBTB8BQ8NAP8 495 aaPredicted RBP6.22□□□□□ -1.41
NUP50-217ENST00000491860 OR8A1Q8NGG7 326 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 ARL6Q9H0F7 186 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 GSKIPQ9P0R6 139 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 PXMP4Q9Y6I8 212 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 DNAH2Q9P225 4427 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 PRSS29PA6NIE9 313 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 M0R2Z0 102 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 AGPAT2O15120 278 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 CRXO43186 299 aaPredicted RBP6.21□□□□□ -1.42
NUP50-217ENST00000491860 IL7P13232 177 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 CDKN1BP46527 198 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 RRAS2P62070 204 aaPredicted RBP6.21□□□□□ -1.42
NUP50-217ENST00000491860 HIST1H1AQ02539 215 aaPredicted RBP6.21□□□□□ -1.42
NUP50-217ENST00000491860 LINC00305Q7Z4B0 112 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 C12orf45Q8N5I9 185 aaPredicted RBP6.21□□□□□ -1.42
NUP50-217ENST00000491860 RNF182Q8N6D2 247 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 OR1L4Q8NGR5 311 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 OR10J6PQ8NGY7 276 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 C17orf77Q96MU5 243 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 LINC01587Q99440 93 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 PFDN5Q99471 154 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 ATG101Q9BSB4 218 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 C20orf85Q9H1P6 137 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 FLVCR2Q9UPI3 526 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 DNAH17Q9UFH2 4485 aa6.21□□□□□ -1.42
NUP50-217ENST00000491860 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
NUP50-217ENST00000491860 A0A1B0GVY2 172 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 C7orf66A4D0T2 115 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 CBY3A6NI87 242 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 H7BYZ3 331 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 LYRM1O43325 122 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 ATP5G1P05496 136 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 BTCP35070 178 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 ATP5G3P48201 142 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 CCL18P55774 89 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 HBG1P69891 147 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 HBG2P69892 147 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 SLC38A11Q08AI6 406 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 C10orf113Q5VZT2 155 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 TMEM88Q6PEY1 159 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 CCDC28AQ8IWP9 274 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 TMEM263Q8WUH6 116 aaKnown RBP6.2□□□□□ -1.42
NUP50-217ENST00000491860 RPUSD4Q96CM3 377 aaKnown RBP6.2□□□□□ -1.42
NUP50-217ENST00000491860 UHRF2Q96PU4 802 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 ZNF331Q9NQX6 463 aaPredicted RBP6.2□□□□□ -1.42
NUP50-217ENST00000491860 RCL1Q9Y2P8 373 aaKnown RBP6.2□□□□□ -1.42
NUP50-217ENST00000491860 TIMM8BQ9Y5J9 83 aaPredicted RBP6.2□□□□□ -1.42
NUP50-217ENST00000491860 MUC4Q99102 2169 aa6.2□□□□□ -1.42
NUP50-217ENST00000491860 LINC00854A0A1B0GVQ3 168 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 ZNF705GA8MUZ8 300 aaPredicted RBP6.19□□□□□ -1.42
NUP50-217ENST00000491860 MRPS12O15235 138 aaKnown RBP6.19□□□□□ -1.42
NUP50-217ENST00000491860 ZNF253O75346 499 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 MBPP02686 304 aaPredicted RBP6.19□□□□□ -1.42
NUP50-217ENST00000491860 S100A11P31949 105 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 CAMLGP49069 296 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 BCAP31P51572 246 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 CAV2P51636 162 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 C1orf134Q5TEV5 83 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 IGFL4Q6B9Z1 124 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 PATE2Q6UY27 113 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 Q6ZR54 194 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 LINC00299Q6ZSB3 139 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 STX12Q86Y82 276 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 BAP18Q8IXM2 172 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 ZNF431Q8TF32 576 aaPredicted RBP6.19□□□□□ -1.42
NUP50-217ENST00000491860 ODF3Q96PU9 254 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 SDHCQ99643 169 aaPredicted RBP6.19□□□□□ -1.42
NUP50-217ENST00000491860 CCDC32Q9BV29 185 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 DNAJC4Q9NNZ3 241 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 UQCC1Q9NVA1 299 aa6.19□□□□□ -1.42
NUP50-217ENST00000491860 DNAH11Q96DT5 4516 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 TRAV12-2A0A075B6T6 113 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 C5orf51A6NDU8 294 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 FAM25EA8MYX2 175 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 F5H768 121 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 M0R2N4 97 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 RTL8CO15255 209 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 MPDU1O75352 247 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 CCNKO75909 580 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 TCRBP04435 133 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 DEFB130BP0DP73 79 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 DEFB130AP0DP74 79 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 LEPP41159 167 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 ATP6V1FQ16864 119 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 CHAC2Q8WUX2 184 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 MRPL53Q96EL3 112 aaKnown RBP6.18□□□□□ -1.42
NUP50-217ENST00000491860 ZNF503Q96F45 646 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 C2orf50Q96LR7 162 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 MGST2Q99735 147 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 LSM5Q9Y4Y9 91 aaKnown RBP6.18□□□□□ -1.42
NUP50-217ENST00000491860 PKD1P98161 4303 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 NACAE9PAV3 2078 aa6.18□□□□□ -1.42
NUP50-217ENST00000491860 SNURFLB1AK76 121 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms