RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 GRAMD2BQ96HH9 432 aa17.89■□□□□ 0.45
USF3-203ENST00000491165 TPSG1Q9NRR2 321 aa17.89■□□□□ 0.45
USF3-203ENST00000491165 TRAV34A0A0B4J273 112 aa17.89■□□□□ 0.45
USF3-203ENST00000491165 DIRC3C9JPN6 131 aa17.89■□□□□ 0.45
USF3-203ENST00000491165 REG1AP05451 166 aa17.89■□□□□ 0.45
USF3-203ENST00000491165 HES1Q14469 280 aa17.89■□□□□ 0.45
USF3-203ENST00000491165 ETFRF1Q6IPR1 90 aa17.89■□□□□ 0.45
USF3-203ENST00000491165 ZNF324O75467 553 aaPredicted RBP17.88■□□□□ 0.45
USF3-203ENST00000491165 STXBP6Q8NFX7 210 aa17.88■□□□□ 0.45
USF3-203ENST00000491165 OR4B1Q8NGF8 309 aa17.88■□□□□ 0.45
USF3-203ENST00000491165 TMEM68Q96MH6 324 aa17.88■□□□□ 0.45
USF3-203ENST00000491165 CHRDL1Q9BU40 450 aa17.88■□□□□ 0.45
USF3-203ENST00000491165 H3BUX3 64 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 EBI3Q14213 229 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 ASPHD1Q5U4P2 390 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 Q8N976 141 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 NUDT10Q8NFP7 164 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 NUDT11Q96G61 164 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 IGHV4-59P01825 116 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 LGALS7P47929 136 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 SLAQ13239 276 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 TMEM219Q86XT9 240 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 Q8N6K4 173 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 TNFRSF19Q9NS68 423 aa17.87■□□□□ 0.45
USF3-203ENST00000491165 MYCNOSP40205 109 aa17.86■□□□□ 0.45
USF3-203ENST00000491165 MOSP00540 346 aa17.86■□□□□ 0.45
USF3-203ENST00000491165 ORM2P19652 201 aa17.86■□□□□ 0.45
USF3-203ENST00000491165 MFAP2P55001 183 aa17.86■□□□□ 0.45
USF3-203ENST00000491165 UBE2G1P62253 170 aa17.86■□□□□ 0.45
USF3-203ENST00000491165 MRGPRG-AS1Q2M3A8 158 aa17.86■□□□□ 0.45
USF3-203ENST00000491165 NUP35Q8NFH5 326 aa17.86■□□□□ 0.45
USF3-203ENST00000491165 IGLC7A0M8Q6 106 aa17.85■□□□□ 0.45
USF3-203ENST00000491165 CRYGCP07315 174 aa17.85■□□□□ 0.45
USF3-203ENST00000491165 HIST1H1EP10412 219 aaKnown RBP17.85■□□□□ 0.45
USF3-203ENST00000491165 GNG5P63218 68 aa17.85■□□□□ 0.45
USF3-203ENST00000491165 LY6EQ16553 131 aa17.85■□□□□ 0.45
USF3-203ENST00000491165 PRR27Q6MZM9 219 aa17.85■□□□□ 0.45
USF3-203ENST00000491165 OR1B1Q8NGR6 318 aa17.85■□□□□ 0.45
USF3-203ENST00000491165 TSKUQ8WUA8 353 aa17.85■□□□□ 0.45
USF3-203ENST00000491165 MRPL27Q9P0M9 148 aaKnown RBP17.85■□□□□ 0.45
USF3-203ENST00000491165 EPDR1Q9UM22 224 aa17.85■□□□□ 0.45
USF3-203ENST00000491165 Q6YL49 198 aa17.84■□□□□ 0.45
USF3-203ENST00000491165 C18orf32Q8TCD1 76 aa17.84■□□□□ 0.45
USF3-203ENST00000491165 TMEM11P17152 192 aa17.84■□□□□ 0.45
USF3-203ENST00000491165 TEX45Q8NA69 505 aa17.84■□□□□ 0.45
USF3-203ENST00000491165 TRGV9Q99603 122 aa17.84■□□□□ 0.45
USF3-203ENST00000491165 SLC25A5P05141 298 aaKnown RBP17.83■□□□□ 0.45
USF3-203ENST00000491165 FAM106CPP0CH98 169 aa17.83■□□□□ 0.45
USF3-203ENST00000491165 MMDQ15546 238 aa17.83■□□□□ 0.45
USF3-203ENST00000491165 PVRIGQ6DKI7 326 aa17.83■□□□□ 0.45
USF3-203ENST00000491165 NIT1Q86X76 327 aa17.83■□□□□ 0.45
USF3-203ENST00000491165 TEX29Q8N6K0 151 aa17.83■□□□□ 0.45
USF3-203ENST00000491165 BLNKQ8WV28 456 aa17.83■□□□□ 0.45
USF3-203ENST00000491165 SMIM12Q96EX1 92 aa17.83■□□□□ 0.45
USF3-203ENST00000491165 RPLP1P05386 114 aaKnown RBP17.83■□□□□ 0.44
USF3-203ENST00000491165 DUX5Q96PT3 197 aa17.83■□□□□ 0.44
USF3-203ENST00000491165 HOXA3O43365 443 aaPredicted RBP17.82■□□□□ 0.44
USF3-203ENST00000491165 RPL27AP46776 148 aaKnown RBP17.82■□□□□ 0.44
USF3-203ENST00000491165 C19orf35Q6ZS72 473 aa17.82■□□□□ 0.44
USF3-203ENST00000491165 FBXL15Q9H469 300 aa17.82■□□□□ 0.44
USF3-203ENST00000491165 PGPA6NDG6 321 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 C3orf79P0CE67 100 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 SRD5A1P18405 259 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 TNXAQ16473 311 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 GDF5OSQ5U4N7 250 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 FAM19A2Q8N3H0 131 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 KLF12Q9Y4X4 402 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 HIGD1CA8MV81 97 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 CRYGBP07316 175 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 ZNF124Q15973 351 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 TMEM116Q8NCL8 245 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 BORCS7Q96B45 105 aa17.81■□□□□ 0.44
USF3-203ENST00000491165 NBR2O15453 112 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 HYPMO75409 117 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 NDUFA3O95167 84 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 NBEAP1P0C6P0 100 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 NTF3P20783 257 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 G0S2P27469 103 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 CTRLP40313 264 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 SPATA45Q537H7 98 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 ATP5L2Q7Z4Y8 100 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 NPBQ8NG41 125 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 A6NDX4 124 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 NCBP2LA6PVI3 153 aaKnown RBP17.8■□□□□ 0.44
USF3-203ENST00000491165 GPR82Q96P67 336 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 RNF5Q99942 180 aa17.8■□□□□ 0.44
USF3-203ENST00000491165 CORTO00230 105 aa17.79■□□□□ 0.44
USF3-203ENST00000491165 KLF5Q13887 457 aaPredicted RBP17.79■□□□□ 0.44
USF3-203ENST00000491165 Q8N9W7 124 aa17.79■□□□□ 0.44
USF3-203ENST00000491165 ESM1Q9NQ30 184 aa17.79■□□□□ 0.44
USF3-203ENST00000491165 RPH3ALQ9UNE2 315 aa17.79■□□□□ 0.44
USF3-203ENST00000491165 SIGLEC9Q9Y336 463 aa17.79■□□□□ 0.44
USF3-203ENST00000491165 SH2D7A6NKC9 451 aaPredicted RBP17.78■□□□□ 0.44
USF3-203ENST00000491165 OR2J3O76001 311 aa17.78■□□□□ 0.44
USF3-203ENST00000491165 RBM14Q96PK6 669 aaKnown RBP17.78■□□□□ 0.44
USF3-203ENST00000491165 C5orf17Q8NAS9 161 aa17.78■□□□□ 0.44
USF3-203ENST00000491165 SGK494Q96LW2 274 aa17.78■□□□□ 0.44
USF3-203ENST00000491165 APELAP0DMC3 54 aa17.77■□□□□ 0.44
USF3-203ENST00000491165 GP9P14770 177 aa17.77■□□□□ 0.44
USF3-203ENST00000491165 ZNF25P17030 456 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms