RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 RFNGQ9Y644 331 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 HLA-DRB4X5D2U9 266 aa9.42□□□□□ -0.9
LIMK1-207ENST00000491052 H3BMM0 161 aa9.41□□□□□ -0.9
LIMK1-207ENST00000491052 IGLC2P0DOY2 106 aa9.41□□□□□ -0.9
LIMK1-207ENST00000491052 CXCL2P19875 107 aa9.41□□□□□ -0.9
LIMK1-207ENST00000491052 C4BPBP20851 252 aa9.41□□□□□ -0.9
LIMK1-207ENST00000491052 HLA-DMBP28068 263 aa9.41□□□□□ -0.9
LIMK1-207ENST00000491052 MIR17HGQ75NE6 70 aa9.41□□□□□ -0.9
LIMK1-207ENST00000491052 OR4B1Q8NGF8 309 aa9.41□□□□□ -0.9
LIMK1-207ENST00000491052 RNF183Q96D59 192 aa9.41□□□□□ -0.9
LIMK1-207ENST00000491052 SLC50A1Q9BRV3 221 aa9.41□□□□□ -0.9
LIMK1-207ENST00000491052 MRPL32Q9BYC8 188 aaKnown RBP9.41□□□□□ -0.9
LIMK1-207ENST00000491052 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
LIMK1-207ENST00000491052 H3BQ15 152 aa9.4□□□□□ -0.9
LIMK1-207ENST00000491052 SLC17A3O00476 420 aa9.4□□□□□ -0.9
LIMK1-207ENST00000491052 PYYP10082 97 aa9.4□□□□□ -0.9
LIMK1-207ENST00000491052 NUTF2P61970 127 aaKnown RBP9.4□□□□□ -0.9
LIMK1-207ENST00000491052 SLC25A2Q9BXI2 301 aa9.4□□□□□ -0.9
LIMK1-207ENST00000491052 HRH4Q9H3N8 390 aa9.4□□□□□ -0.9
LIMK1-207ENST00000491052 ZNF331Q9NQX6 463 aaPredicted RBP9.4□□□□□ -0.9
LIMK1-207ENST00000491052 FUT9Q9Y231 359 aa9.4□□□□□ -0.9
LIMK1-207ENST00000491052 TIMM9Q9Y5J7 89 aa9.4□□□□□ -0.9
LIMK1-207ENST00000491052 BORCS7-ASMTA0A0B4J1R7 106 aa9.39□□□□□ -0.91
LIMK1-207ENST00000491052 A0A0J9YX75 114 aa9.39□□□□□ -0.91
LIMK1-207ENST00000491052 RHOBP62745 196 aa9.39□□□□□ -0.91
LIMK1-207ENST00000491052 PSG3Q16557 428 aa9.39□□□□□ -0.91
LIMK1-207ENST00000491052 GUK1Q16774 197 aa9.39□□□□□ -0.91
LIMK1-207ENST00000491052 ACOT6Q3I5F7 207 aaPredicted RBP9.39□□□□□ -0.91
LIMK1-207ENST00000491052 TMEM41BQ5BJD5 291 aa9.39□□□□□ -0.91
LIMK1-207ENST00000491052 RPL7L1Q6DKI1 246 aaKnown RBP9.39□□□□□ -0.91
LIMK1-207ENST00000491052 Q6ZNX1 250 aa9.39□□□□□ -0.91
LIMK1-207ENST00000491052 FAM167A-AS1Q96KT0 104 aa9.39□□□□□ -0.91
LIMK1-207ENST00000491052 MFFQ9GZY8 342 aa9.39□□□□□ -0.91
LIMK1-207ENST00000491052 ZNF586Q9NXT0 402 aa9.39□□□□□ -0.91
LIMK1-207ENST00000491052 TMEM14CQ9P0S9 112 aa9.39□□□□□ -0.91
LIMK1-207ENST00000491052 hCG_2014768A0A024R1R8 64 aa9.38□□□□□ -0.91
LIMK1-207ENST00000491052 OR7C2O60412 319 aa9.38□□□□□ -0.91
LIMK1-207ENST00000491052 GIG44P09565 113 aaPredicted RBP9.38□□□□□ -0.91
LIMK1-207ENST00000491052 ZNF705DP0CH99 300 aaPredicted RBP9.38□□□□□ -0.91
LIMK1-207ENST00000491052 ZNF705BP0CI00 300 aaPredicted RBP9.38□□□□□ -0.91
LIMK1-207ENST00000491052 PRB4P10163 310 aaPredicted RBP9.38□□□□□ -0.91
LIMK1-207ENST00000491052 HIST1H1EP10412 219 aaKnown RBP9.38□□□□□ -0.91
LIMK1-207ENST00000491052 ATP6V0CP27449 155 aa9.38□□□□□ -0.91
LIMK1-207ENST00000491052 FXYD7P58549 80 aa9.38□□□□□ -0.91
LIMK1-207ENST00000491052 RAB2AP61019 212 aa9.38□□□□□ -0.91
LIMK1-207ENST00000491052 BLNKQ8WV28 456 aa9.38□□□□□ -0.91
LIMK1-207ENST00000491052 RPUSD4Q96CM3 377 aaKnown RBP9.38□□□□□ -0.91
LIMK1-207ENST00000491052 PSMG3Q9BT73 122 aaPredicted RBP9.38□□□□□ -0.91
LIMK1-207ENST00000491052 PAXXQ9BUH6 204 aa9.38□□□□□ -0.91
LIMK1-207ENST00000491052 CLEC5AQ9NY25 188 aa9.38□□□□□ -0.91
LIMK1-207ENST00000491052 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
LIMK1-207ENST00000491052 TRBV19A0A075B6N1 114 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 A0A1W2PPV4 95 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 EIF3GO75821 320 aaKnown RBP eCLIP9.37□□□□□ -0.91
LIMK1-207ENST00000491052 DUSP14O95147 198 aaKnown RBP9.37□□□□□ -0.91
LIMK1-207ENST00000491052 OR10J4P0C629 311 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 M6PRP20645 277 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 CNN1P51911 297 aaKnown RBP9.37□□□□□ -0.91
LIMK1-207ENST00000491052 TAS2R45P59539 299 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 HIST1H1AQ02539 215 aaPredicted RBP9.37□□□□□ -0.91
LIMK1-207ENST00000491052 KHDC3LQ587J8 217 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 FAM122CQ6P4D5 195 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 OR11H2Q8NH07 326 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 SAT2Q96F10 170 aaPredicted RBP9.37□□□□□ -0.91
LIMK1-207ENST00000491052 RARRES2Q99969 163 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 C1QTNF4Q9BXJ3 329 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 SLC35B3Q9H1N7 401 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 SH3BGRL3Q9H299 93 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 OR51M1Q9H341 326 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 EDA2RQ9HAV5 297 aa9.37□□□□□ -0.91
LIMK1-207ENST00000491052 ZNF705FA8MVS1 300 aaPredicted RBP9.36□□□□□ -0.91
LIMK1-207ENST00000491052 TAAR5O14804 337 aa9.36□□□□□ -0.91
LIMK1-207ENST00000491052 ZNF253O75346 499 aa9.36□□□□□ -0.91
LIMK1-207ENST00000491052 UBE2L3P68036 154 aaKnown RBP9.36□□□□□ -0.91
LIMK1-207ENST00000491052 PSG9Q00887 426 aa9.36□□□□□ -0.91
LIMK1-207ENST00000491052 OR11H4Q8NGC9 324 aa9.36□□□□□ -0.91
LIMK1-207ENST00000491052 OR8A1Q8NGG7 326 aa9.36□□□□□ -0.91
LIMK1-207ENST00000491052 OR10G4Q8NGN3 311 aa9.36□□□□□ -0.91
LIMK1-207ENST00000491052 OR10G9Q8NGN4 311 aa9.36□□□□□ -0.91
LIMK1-207ENST00000491052 OR10G7Q8NGN6 311 aa9.36□□□□□ -0.91
LIMK1-207ENST00000491052 OR2G3Q8NGZ4 309 aa9.36□□□□□ -0.91
LIMK1-207ENST00000491052 RNF141Q8WVD5 230 aa9.36□□□□□ -0.91
LIMK1-207ENST00000491052 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
LIMK1-207ENST00000491052 CLUHP3Q96NS8 147 aa9.36□□□□□ -0.91
LIMK1-207ENST00000491052 A0A0J9YWU9 116 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 HMSDA8MTL9 139 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 NDUFB4O95168 129 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 NBEAP1P0C6P0 100 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 PDE6HQ13956 83 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 ZNF345Q14585 488 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 KCNRGQ8N5I3 272 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 MUC7Q8TAX7 377 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 FXYD5Q96DB9 178 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 ST6GAL2Q96JF0 529 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 PPP1R14DQ9NXH3 145 aa9.35□□□□□ -0.91
LIMK1-207ENST00000491052 A8MTW9 85 aa9.34□□□□□ -0.91
LIMK1-207ENST00000491052 PRAC2D3DTV9 90 aa9.34□□□□□ -0.91
LIMK1-207ENST00000491052 HMGB3O15347 200 aaKnown RBP9.34□□□□□ -0.91
LIMK1-207ENST00000491052 JTBO76095 146 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms