RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 WIPF2Q8TF74 440 aaPredicted RBP5.8□□□□□ -1.48
NPHP3-208ENST00000490993 PMCHL2Q9BQD1 86 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 PEMTQ9UBM1 199 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 SH2D1AO60880 128 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 C10orf105Q8TEF2 133 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 ZNF414Q96IQ9 312 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 IGF2BP2-AS1Q96M15 143 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 IGHV7-81A0A0B4J1V7 117 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 RPLP1P05386 114 aaKnown RBP5.8□□□□□ -1.48
NPHP3-208ENST00000490993 NIT1Q86X76 327 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 IFITM10A6NMD0 228 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 NDUFA4O00483 81 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 ZFP36P26651 326 aaKnown RBP5.8□□□□□ -1.48
NPHP3-208ENST00000490993 TFPI2P48307 235 aa5.8□□□□□ -1.48
NPHP3-208ENST00000490993 TPRP12270 2363 aaKnown RBP5.8□□□□□ -1.48
NPHP3-208ENST00000490993 TRAV8-1A0A0A6YYK1 113 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 WI2-2373I1.2A0A1W2PRP0 233 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 DUSP14O95147 198 aaKnown RBP5.79□□□□□ -1.48
NPHP3-208ENST00000490993 IGKV1-17P01599 117 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 TMEM256Q8N2U0 113 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 SPTBN2O15020 2390 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 LINC00527Q9UJ94 153 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 TRBV20OR9-2A0A075B6H5 130 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 IGKV1D-37A0A075B6S9 117 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 TRBV6-1A0A0K0K1D8 114 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 LINC01559Q495D7 138 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 PET117Q6UWS5 81 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 Q8N9W7 124 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 DUX5Q96PT3 197 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 BEX4Q9NWD9 120 aaPredicted RBP5.79□□□□□ -1.48
NPHP3-208ENST00000490993 KLF12Q9Y4X4 402 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 PSMB11A5LHX3 300 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 HAX1O00165 279 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 C21orf62-AS1Q17RA5 79 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 COL5A1-AS1Q5SY13 56 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 FAM19A2Q8N3H0 131 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 TMEM208Q9BTX3 173 aa5.79□□□□□ -1.48
NPHP3-208ENST00000490993 PEF1Q9UBV8 284 aaKnown RBP5.79□□□□□ -1.48
NPHP3-208ENST00000490993 LINC00587B1AMM8 73 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 G3V318 75 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 LYZL1Q6UWQ5 148 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 MRPL53Q96EL3 112 aaKnown RBP5.78□□□□□ -1.48
NPHP3-208ENST00000490993 RAX2Q96IS3 184 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 MIEN1Q9BRT3 115 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 NDUFAF3Q9BU61 184 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 NXT2Q9NPJ8 142 aaKnown RBP5.78□□□□□ -1.48
NPHP3-208ENST00000490993 CACNA1GO43497 2377 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 EBI3Q14213 229 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 ZNF502Q8TBZ5 544 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 CFHR4Q92496 578 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 DAZ1Q9NQZ3 744 aaKnown RBP5.78□□□□□ -1.48
NPHP3-208ENST00000490993 RBAKDNA6NC62 111 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 SH2D7A6NKC9 451 aaPredicted RBP5.78□□□□□ -1.48
NPHP3-208ENST00000490993 M0R3E3 92 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 GZMBP10144 247 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 MORN5Q5VZ52 161 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 SLC25A34Q6PIV7 304 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 GOLT1BQ9Y3E0 138 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 A8MWP6 167 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 FCER1GP30273 86 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 PRDM13Q9H4Q3 707 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 LAMTOR2Q9Y2Q5 125 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 PKDREJQ9NTG1 2253 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 LOC102724200A0A096LPH7 203 aaPredicted RBP5.78□□□□□ -1.48
NPHP3-208ENST00000490993 IGHV4-61A0A0C4DH41 118 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 ATP5LO75964 103 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 RNASE4P34096 147 aaKnown RBP5.78□□□□□ -1.48
NPHP3-208ENST00000490993 HERVK_113P61574 105 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 ZNF503Q96F45 646 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 YPEL4Q96NS1 127 aa5.78□□□□□ -1.48
NPHP3-208ENST00000490993 DOCK11Q5JSL3 2073 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 LMO4P61968 165 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 DMRTA1Q5VZB9 504 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 C12orf54Q6X4T0 127 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 PRR25Q96S07 402 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 MRPL36Q9P0J6 103 aaKnown RBP5.77□□□□□ -1.49
NPHP3-208ENST00000490993 ROS1P08922 2347 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 FAM181BA6NEQ2 426 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 OR4C46A6NHA9 309 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 NUDT3O95989 172 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 C11orf42Q8N5U0 333 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 MALRD1Q5VYJ5 2156 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 C5orf56Q8N8D9 126 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 MUC6Q6W4X9 2439 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 TRAV9-2A0A087WT02 112 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 HBDP02042 147 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 CTSGP08311 255 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 C18orf32Q8TCD1 76 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 RHPN1-AS1Q9BWJ2 59 aa5.77□□□□□ -1.49
NPHP3-208ENST00000490993 PTTG1IPP53801 180 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 MRPL52Q86TS9 123 aaKnown RBP5.76□□□□□ -1.49
NPHP3-208ENST00000490993 A6NDN8 102 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 SMAD7O15105 426 aaKnown RBP5.76□□□□□ -1.49
NPHP3-208ENST00000490993 ZNF318Q5VUA4 2279 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 NDPQ00604 133 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 VAMP3Q15836 100 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 Q8TAT8 98 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 ZC2HC1AQ96GY0 325 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 LINC01549A6NIU2 74 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms