RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 KIR3DS1Q14943 382 aa11.61□□□□□ -0.55
SRGAP3-209ENST00000490889 RNF141Q8WVD5 230 aa11.61□□□□□ -0.55
SRGAP3-209ENST00000490889 FLVCR2Q9UPI3 526 aa11.61□□□□□ -0.55
SRGAP3-209ENST00000490889 LINC00588Q9Y4M8 146 aa11.61□□□□□ -0.55
SRGAP3-209ENST00000490889 CBY3A6NI87 242 aa11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 SNRPCP09234 159 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 METTL15P1P0C7V9 234 aa11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 TAS2R60P59551 318 aa11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 UBE2MP61081 183 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 SLC38A11Q08AI6 406 aa11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 TMEM14EPQ6UXP3 125 aa11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 RPUSD4Q96CM3 377 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 SMIM8Q96KF7 97 aa11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 PARD6GQ9BYG4 376 aaPredicted RBP11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 ARL6Q9H0F7 186 aa11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 ARV1Q9H2C2 271 aa11.6□□□□□ -0.55
SRGAP3-209ENST00000490889 SELENOTP62341 195 aa11.59□□□□□ -0.55
SRGAP3-209ENST00000490889 DLK1P80370 383 aa11.59□□□□□ -0.55
SRGAP3-209ENST00000490889 TMEM256Q8N2U0 113 aa11.59□□□□□ -0.55
SRGAP3-209ENST00000490889 C6orf223Q8N319 242 aa11.59□□□□□ -0.55
SRGAP3-209ENST00000490889 RNASE8Q8TDE3 154 aaKnown RBP11.59□□□□□ -0.55
SRGAP3-209ENST00000490889 C16orf74Q96GX8 76 aa11.59□□□□□ -0.55
SRGAP3-209ENST00000490889 SRRQ9GZT4 340 aa11.59□□□□□ -0.55
SRGAP3-209ENST00000490889 C16orf90A8MZG2 172 aa11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 K7EPK0 472 aa11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 NDUFB6O95139 128 aa11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 CDKN1BP46527 198 aa11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 ARL16Q0P5N6 197 aa11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 BAK1Q16611 211 aa11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 LRRC20Q8TCA0 184 aa11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 NPVFQ9HCQ7 196 aa11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 NOP10Q9NPE3 64 aaKnown RBP11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 ZNF331Q9NQX6 463 aaPredicted RBP11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 PPP1R14DQ9NXH3 145 aa11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 TIMM8BQ9Y5J9 83 aaPredicted RBP11.58□□□□□ -0.56
SRGAP3-209ENST00000490889 PRAC2D3DTV9 90 aa11.57□□□□□ -0.56
SRGAP3-209ENST00000490889 FNDC10F2Z333 226 aa11.57□□□□□ -0.56
SRGAP3-209ENST00000490889 OR4E1P0C645 316 aa11.57□□□□□ -0.56
SRGAP3-209ENST00000490889 S100A5P33763 92 aa11.57□□□□□ -0.56
SRGAP3-209ENST00000490889 CCL18P55774 89 aa11.57□□□□□ -0.56
SRGAP3-209ENST00000490889 MORN5Q5VZ52 161 aa11.57□□□□□ -0.56
SRGAP3-209ENST00000490889 RCL1Q9Y2P8 373 aaKnown RBP11.57□□□□□ -0.56
SRGAP3-209ENST00000490889 H3BTX0 84 aa11.56□□□□□ -0.56
SRGAP3-209ENST00000490889 SLC17A3O00476 420 aa11.56□□□□□ -0.56
SRGAP3-209ENST00000490889 SCGB1D2O95969 90 aa11.56□□□□□ -0.56
SRGAP3-209ENST00000490889 ANXA7P20073 488 aaKnown RBP11.56□□□□□ -0.56
SRGAP3-209ENST00000490889 TEPPQ6URK8 271 aa11.56□□□□□ -0.56
SRGAP3-209ENST00000490889 SSX7Q7RTT5 188 aa11.56□□□□□ -0.56
SRGAP3-209ENST00000490889 LINC00305Q7Z4B0 112 aa11.56□□□□□ -0.56
SRGAP3-209ENST00000490889 ZBTB8BQ8NAP8 495 aaPredicted RBP11.56□□□□□ -0.56
SRGAP3-209ENST00000490889 OR10P1Q8NGE3 313 aa11.56□□□□□ -0.56
SRGAP3-209ENST00000490889 TMEM263Q8WUH6 116 aaKnown RBP11.56□□□□□ -0.56
SRGAP3-209ENST00000490889 KRTAP1-5Q9BYS1 174 aa11.56□□□□□ -0.56
SRGAP3-209ENST00000490889 H7BYZ3 331 aa11.55□□□□□ -0.56
SRGAP3-209ENST00000490889 AGPAT2O15120 278 aa11.55□□□□□ -0.56
SRGAP3-209ENST00000490889 CXCL2P19875 107 aa11.55□□□□□ -0.56
SRGAP3-209ENST00000490889 BTCP35070 178 aa11.55□□□□□ -0.56
SRGAP3-209ENST00000490889 IAH1Q2TAA2 248 aaPredicted RBP11.55□□□□□ -0.56
SRGAP3-209ENST00000490889 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
SRGAP3-209ENST00000490889 LCN15Q6UWW0 184 aa11.55□□□□□ -0.56
SRGAP3-209ENST00000490889 ZNF493Q6ZR52 646 aa11.55□□□□□ -0.56
SRGAP3-209ENST00000490889 LINC00612Q8N6U2 182 aa11.55□□□□□ -0.56
SRGAP3-209ENST00000490889 TMEM37Q8WXS4 190 aa11.55□□□□□ -0.56
SRGAP3-209ENST00000490889 MGAT4CQ9UBM8 478 aa11.55□□□□□ -0.56
SRGAP3-209ENST00000490889 LINC00854A0A1B0GVQ3 168 aa11.54□□□□□ -0.56
SRGAP3-209ENST00000490889 CCDC160A6NGH7 325 aa11.54□□□□□ -0.56
SRGAP3-209ENST00000490889 TSC22D2O75157 780 aa11.54□□□□□ -0.56
SRGAP3-209ENST00000490889 CDK2AP2O75956 126 aa11.54□□□□□ -0.56
SRGAP3-209ENST00000490889 HOXA5P20719 270 aa11.54□□□□□ -0.56
SRGAP3-209ENST00000490889 ZNF546Q86UE3 836 aa11.54□□□□□ -0.56
SRGAP3-209ENST00000490889 MGST2Q99735 147 aa11.54□□□□□ -0.56
SRGAP3-209ENST00000490889 SLC50A1Q9BRV3 221 aa11.54□□□□□ -0.56
SRGAP3-209ENST00000490889 RBM38Q9H0Z9 239 aaKnown RBP11.54□□□□□ -0.56
SRGAP3-209ENST00000490889 TRAV26-1A0A087WT03 109 aa11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 C7orf66A4D0T2 115 aa11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 NAP1L6A6NFF2 107 aa11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 GOSR2O14653 212 aa11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 IGLC2P0DOY2 106 aa11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 TAS2R30P59541 319 aa11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 OR5I1Q13606 314 aa11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 CLINT1Q14677 625 aa11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 OPCMLQ14982 345 aa11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 PXDC1Q5TGL8 231 aa11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 S100A7AQ86SG5 101 aa11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 SDHCQ99643 169 aaPredicted RBP11.53□□□□□ -0.56
SRGAP3-209ENST00000490889 A0A0J9YY99 117 aa11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 H3BQ15 152 aa11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 J3KRW8 73 aa11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 ZNF701M0R085 212 aaPredicted RBP11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 MBPP02686 304 aaPredicted RBP11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 C4orf46Q504U0 113 aa11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 SPANXN2Q5MJ10 180 aa11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 TRIQKQ629K1 86 aa11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 BPIFA4PQ86YQ2 179 aa11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 MAPKAPK5-AS1Q8N8E1 139 aa11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 GNPNAT1Q96EK6 184 aaPredicted RBP11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 SAT2Q96F10 170 aaPredicted RBP11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 C20orf144Q9BQM9 153 aa11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 Q9H8V8 135 aa11.52□□□□□ -0.57
SRGAP3-209ENST00000490889 GSKIPQ9P0R6 139 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms