RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 CLEC5AQ9NY25 188 aa11.19□□□□□ -0.62
VPS26A-207ENST00000490696 TRAV5A0A0B4J249 113 aa11.18□□□□□ -0.62
VPS26A-207ENST00000490696 A8MTW9 85 aa11.18□□□□□ -0.62
VPS26A-207ENST00000490696 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
VPS26A-207ENST00000490696 IGLC2P0DOY2 106 aa11.18□□□□□ -0.62
VPS26A-207ENST00000490696 CXCL2P19875 107 aa11.18□□□□□ -0.62
VPS26A-207ENST00000490696 GCSAMLQ5JQS6 135 aa11.18□□□□□ -0.62
VPS26A-207ENST00000490696 FAM78BQ5VT40 261 aa11.18□□□□□ -0.62
VPS26A-207ENST00000490696 EBLN2Q6P2I7 272 aa11.18□□□□□ -0.62
VPS26A-207ENST00000490696 ZNF709Q8N972 641 aa11.18□□□□□ -0.62
VPS26A-207ENST00000490696 STARD9Q9P2P6 4700 aa11.18□□□□□ -0.62
VPS26A-207ENST00000490696 ZNF705EA8MWA4 302 aaPredicted RBP11.17□□□□□ -0.62
VPS26A-207ENST00000490696 HLA-DMBP28068 263 aa11.17□□□□□ -0.62
VPS26A-207ENST00000490696 LCN15Q6UWW0 184 aa11.17□□□□□ -0.62
VPS26A-207ENST00000490696 OR4B1Q8NGF8 309 aa11.17□□□□□ -0.62
VPS26A-207ENST00000490696 C1QTNF4Q9BXJ3 329 aa11.17□□□□□ -0.62
VPS26A-207ENST00000490696 SMIM3Q9BZL3 60 aa11.17□□□□□ -0.62
VPS26A-207ENST00000490696 C11orf68Q9H3H3 251 aaKnown RBP11.17□□□□□ -0.62
VPS26A-207ENST00000490696 HRH4Q9H3N8 390 aa11.17□□□□□ -0.62
VPS26A-207ENST00000490696 ZNF331Q9NQX6 463 aaPredicted RBP11.17□□□□□ -0.62
VPS26A-207ENST00000490696 XCL2Q9UBD3 114 aa11.17□□□□□ -0.62
VPS26A-207ENST00000490696 H3BQ15 152 aa11.16□□□□□ -0.62
VPS26A-207ENST00000490696 SNRPCP09234 159 aaKnown RBP11.16□□□□□ -0.62
VPS26A-207ENST00000490696 GIPP09681 153 aaPredicted RBP11.16□□□□□ -0.62
VPS26A-207ENST00000490696 PSG9Q00887 426 aa11.16□□□□□ -0.62
VPS26A-207ENST00000490696 Q8NAQ8 132 aa11.16□□□□□ -0.62
VPS26A-207ENST00000490696 ASB13Q8WXK3 278 aa11.16□□□□□ -0.62
VPS26A-207ENST00000490696 WFDC1Q9HC57 220 aa11.16□□□□□ -0.62
VPS26A-207ENST00000490696 KCNIP2Q9NS61 270 aa11.16□□□□□ -0.62
VPS26A-207ENST00000490696 X6R8D5 127 aa11.16□□□□□ -0.62
VPS26A-207ENST00000490696 TENM2Q9NT68 2774 aa11.16□□□□□ -0.62
VPS26A-207ENST00000490696 H3BTX0 84 aa11.15□□□□□ -0.62
VPS26A-207ENST00000490696 SLC17A3O00476 420 aa11.15□□□□□ -0.62
VPS26A-207ENST00000490696 FXYD7P58549 80 aa11.15□□□□□ -0.62
VPS26A-207ENST00000490696 PSG3Q16557 428 aa11.15□□□□□ -0.62
VPS26A-207ENST00000490696 Q5BKY6 102 aa11.15□□□□□ -0.62
VPS26A-207ENST00000490696 AMTNQ6UX39 209 aa11.15□□□□□ -0.62
VPS26A-207ENST00000490696 ZNF738Q8NE65 137 aa11.15□□□□□ -0.62
VPS26A-207ENST00000490696 LRRC20Q8TCA0 184 aa11.15□□□□□ -0.62
VPS26A-207ENST00000490696 SAT2Q96F10 170 aaPredicted RBP11.15□□□□□ -0.62
VPS26A-207ENST00000490696 SLC50A1Q9BRV3 221 aa11.15□□□□□ -0.62
VPS26A-207ENST00000490696 SLC35B3Q9H1N7 401 aa11.15□□□□□ -0.62
VPS26A-207ENST00000490696 DEFB4AO15263 64 aa11.14□□□□□ -0.63
VPS26A-207ENST00000490696 DUSP14O95147 198 aaKnown RBP11.14□□□□□ -0.63
VPS26A-207ENST00000490696 IFNA5P01569 189 aa11.14□□□□□ -0.63
VPS26A-207ENST00000490696 MIFP14174 115 aa11.14□□□□□ -0.63
VPS26A-207ENST00000490696 CNN1P51911 297 aaKnown RBP11.14□□□□□ -0.63
VPS26A-207ENST00000490696 PARD6GQ9BYG4 376 aaPredicted RBP11.14□□□□□ -0.63
VPS26A-207ENST00000490696 TMEM14CQ9P0S9 112 aa11.14□□□□□ -0.63
VPS26A-207ENST00000490696 IGHV4-28A0A0C4DH34 117 aa11.13□□□□□ -0.63
VPS26A-207ENST00000490696 C17orf112F2Z3M2 114 aa11.13□□□□□ -0.63
VPS26A-207ENST00000490696 ZNF705DP0CH99 300 aaPredicted RBP11.13□□□□□ -0.63
VPS26A-207ENST00000490696 ZNF705BP0CI00 300 aaPredicted RBP11.13□□□□□ -0.63
VPS26A-207ENST00000490696 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
VPS26A-207ENST00000490696 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
VPS26A-207ENST00000490696 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
VPS26A-207ENST00000490696 GUK1Q16774 197 aa11.13□□□□□ -0.63
VPS26A-207ENST00000490696 ZNF705AQ6ZN79 300 aaPredicted RBP11.13□□□□□ -0.63
VPS26A-207ENST00000490696 OR8A1Q8NGG7 326 aa11.13□□□□□ -0.63
VPS26A-207ENST00000490696 SCGB1C1Q8TD33 95 aa11.13□□□□□ -0.63
VPS26A-207ENST00000490696 FAM167A-AS1Q96KT0 104 aa11.13□□□□□ -0.63
VPS26A-207ENST00000490696 AQP10Q96PS8 301 aa11.13□□□□□ -0.63
VPS26A-207ENST00000490696 MFFQ9GZY8 342 aa11.13□□□□□ -0.63
VPS26A-207ENST00000490696 ZNF586Q9NXT0 402 aa11.13□□□□□ -0.63
VPS26A-207ENST00000490696 LCE2BO14633 110 aa11.12□□□□□ -0.63
VPS26A-207ENST00000490696 ZNF253O75346 499 aa11.12□□□□□ -0.63
VPS26A-207ENST00000490696 MIR17HGQ75NE6 70 aa11.12□□□□□ -0.63
VPS26A-207ENST00000490696 RPUSD4Q96CM3 377 aaKnown RBP11.12□□□□□ -0.63
VPS26A-207ENST00000490696 SLC25A2Q9BXI2 301 aa11.12□□□□□ -0.63
VPS26A-207ENST00000490696 DYNC2H1Q8NCM8 4307 aaKnown RBP11.12□□□□□ -0.63
VPS26A-207ENST00000490696 TRBV19A0A075B6N1 114 aa11.11□□□□□ -0.63
VPS26A-207ENST00000490696 ZNF705FA8MVS1 300 aaPredicted RBP11.11□□□□□ -0.63
VPS26A-207ENST00000490696 PYYP10082 97 aa11.11□□□□□ -0.63
VPS26A-207ENST00000490696 PRB4P10163 310 aaPredicted RBP11.11□□□□□ -0.63
VPS26A-207ENST00000490696 HIST1H1EP10412 219 aaKnown RBP11.11□□□□□ -0.63
VPS26A-207ENST00000490696 HIST1H1AQ02539 215 aaPredicted RBP11.11□□□□□ -0.63
VPS26A-207ENST00000490696 PMS2P11Q13670 270 aa11.11□□□□□ -0.63
VPS26A-207ENST00000490696 FFAR4Q5NUL3 377 aa11.11□□□□□ -0.63
VPS26A-207ENST00000490696 NEU1Q99519 415 aa11.11□□□□□ -0.63
VPS26A-207ENST00000490696 MRPL32Q9BYC8 188 aaKnown RBP11.11□□□□□ -0.63
VPS26A-207ENST00000490696 RFNGQ9Y644 331 aa11.11□□□□□ -0.63
VPS26A-207ENST00000490696 CXorf65A6NEN9 183 aa11.1□□□□□ -0.63
VPS26A-207ENST00000490696 G3V3Q6 166 aa11.1□□□□□ -0.63
VPS26A-207ENST00000490696 NDUFB4O95168 129 aa11.1□□□□□ -0.63
VPS26A-207ENST00000490696 C1orf158Q8N1D5 194 aa11.1□□□□□ -0.63
VPS26A-207ENST00000490696 OR2T35Q8NGX2 323 aa11.1□□□□□ -0.63
VPS26A-207ENST00000490696 FUT9Q9Y231 359 aa11.1□□□□□ -0.63
VPS26A-207ENST00000490696 PRAC2D3DTV9 90 aa11.09□□□□□ -0.63
VPS26A-207ENST00000490696 M0R2Z0 102 aa11.09□□□□□ -0.63
VPS26A-207ENST00000490696 CRXO43186 299 aaPredicted RBP11.09□□□□□ -0.63
VPS26A-207ENST00000490696 AMBPP02760 352 aa11.09□□□□□ -0.63
VPS26A-207ENST00000490696 NANOS2P60321 138 aaKnown RBP11.09□□□□□ -0.63
VPS26A-207ENST00000490696 PDE6HQ13956 83 aa11.09□□□□□ -0.63
VPS26A-207ENST00000490696 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
VPS26A-207ENST00000490696 C11orf45Q8TAV5 145 aa11.09□□□□□ -0.63
VPS26A-207ENST00000490696 IGF2BP2-AS1Q96M15 143 aa11.09□□□□□ -0.63
VPS26A-207ENST00000490696 RNF222A6NCQ9 220 aa11.08□□□□□ -0.64
VPS26A-207ENST00000490696 BOLA2-SMG1P6H3BVE0 249 aa11.08□□□□□ -0.64
VPS26A-207ENST00000490696 ZNF266Q14584 549 aa11.08□□□□□ -0.64
VPS26A-207ENST00000490696 BLNKQ8WV28 456 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms