RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 RPP25LQ8N5L8 163 aaKnown RBP14.81□□□□□ -0.04
SHROOM3-209ENST00000490690 MRAPQ8TCY5 172 aa14.81□□□□□ -0.04
SHROOM3-209ENST00000490690 FAM167A-AS1Q96KT0 104 aa14.81□□□□□ -0.04
SHROOM3-209ENST00000490690 TRAV5A0A0B4J249 113 aa14.8□□□□□ -0.04
SHROOM3-209ENST00000490690 SOCS3O14543 225 aa14.8□□□□□ -0.04
SHROOM3-209ENST00000490690 CXorf1O96002 111 aa14.8□□□□□ -0.04
SHROOM3-209ENST00000490690 ZNF688P0C7X2 276 aa14.8□□□□□ -0.04
SHROOM3-209ENST00000490690 STAG3L2P0CL84 134 aa14.8□□□□□ -0.04
SHROOM3-209ENST00000490690 STAG3L3P0CL85 134 aa14.8□□□□□ -0.04
SHROOM3-209ENST00000490690 UBE2L3P68036 154 aaKnown RBP14.8□□□□□ -0.04
SHROOM3-209ENST00000490690 RNF141Q8WVD5 230 aa14.8□□□□□ -0.04
SHROOM3-209ENST00000490690 RAB24Q969Q5 203 aa14.8□□□□□ -0.04
SHROOM3-209ENST00000490690 AAMDCQ9H7C9 122 aa14.8□□□□□ -0.04
SHROOM3-209ENST00000490690 TMEM167BQ9NRX6 74 aa14.8□□□□□ -0.04
SHROOM3-209ENST00000490690 TEX46H3BTG2 121 aa14.79□□□□□ -0.04
SHROOM3-209ENST00000490690 NBEAP1P0C6P0 100 aa14.79□□□□□ -0.04
SHROOM3-209ENST00000490690 DEFB131AP59861 70 aa14.79□□□□□ -0.04
SHROOM3-209ENST00000490690 PSMG4Q5JS54 123 aa14.79□□□□□ -0.04
SHROOM3-209ENST00000490690 LYPD1Q8N2G4 141 aa14.79□□□□□ -0.04
SHROOM3-209ENST00000490690 PRELID1Q9Y255 219 aa14.79□□□□□ -0.04
SHROOM3-209ENST00000490690 TRBV19A0A075B6N1 114 aa14.78□□□□□ -0.04
SHROOM3-209ENST00000490690 K7EIL1 84 aa14.78□□□□□ -0.04
SHROOM3-209ENST00000490690 DEFB121Q5J5C9 76 aa14.78□□□□□ -0.04
SHROOM3-209ENST00000490690 FAM74A1Q5RGS3 127 aa14.78□□□□□ -0.04
SHROOM3-209ENST00000490690 TMED6Q8WW62 240 aa14.78□□□□□ -0.04
SHROOM3-209ENST00000490690 LINC00052Q96N35 136 aa14.78□□□□□ -0.04
SHROOM3-209ENST00000490690 ZNF331Q9NQX6 463 aaPredicted RBP14.78□□□□□ -0.04
SHROOM3-209ENST00000490690 C19orf73Q9NVV2 129 aa14.78□□□□□ -0.04
SHROOM3-209ENST00000490690 RFNGQ9Y644 331 aa14.78□□□□□ -0.04
SHROOM3-209ENST00000490690 IGHV4-30-4P0DP06 118 aa14.77□□□□□ -0.05
SHROOM3-209ENST00000490690 EBLN2Q6P2I7 272 aa14.77□□□□□ -0.05
SHROOM3-209ENST00000490690 FOXI2Q6ZQN5 318 aa14.77□□□□□ -0.05
SHROOM3-209ENST00000490690 MRPL53Q96EL3 112 aaKnown RBP14.77□□□□□ -0.05
SHROOM3-209ENST00000490690 SRD5A3Q9H8P0 318 aa14.77□□□□□ -0.05
SHROOM3-209ENST00000490690 UBQLN2Q9UHD9 624 aa14.77□□□□□ -0.05
SHROOM3-209ENST00000490690 PYYP10082 97 aa14.76□□□□□ -0.05
SHROOM3-209ENST00000490690 NKX2-5P52952 324 aaPredicted RBP14.76□□□□□ -0.05
SHROOM3-209ENST00000490690 STHQ8IWL8 128 aa14.76□□□□□ -0.05
SHROOM3-209ENST00000490690 FXYD5Q96DB9 178 aa14.76□□□□□ -0.05
SHROOM3-209ENST00000490690 SAT2Q96F10 170 aaPredicted RBP14.76□□□□□ -0.05
SHROOM3-209ENST00000490690 ZNF586Q9NXT0 402 aa14.76□□□□□ -0.05
SHROOM3-209ENST00000490690 H3BQ15 152 aa14.75□□□□□ -0.05
SHROOM3-209ENST00000490690 PRB2P02812 416 aaPredicted RBP14.75□□□□□ -0.05
SHROOM3-209ENST00000490690 ARL14EPLP0DKL9 152 aa14.75□□□□□ -0.05
SHROOM3-209ENST00000490690 PSG3Q16557 428 aa14.75□□□□□ -0.05
SHROOM3-209ENST00000490690 DEFB125Q8N687 156 aa14.75□□□□□ -0.05
SHROOM3-209ENST00000490690 LOC102724200A0A096LPH7 203 aaPredicted RBP14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 MAP1LC3B2A6NCE7 125 aa14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 OR10J4P0C629 311 aa14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 SULT1A2P50226 295 aa14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 PPT1P50897 306 aa14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 APOC4P55056 127 aa14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 NUTF2P61970 127 aaKnown RBP14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 FAM24BQ8N5W8 94 aa14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 ZNF738Q8NE65 137 aa14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 FAM213BQ8TBF2 198 aa14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 BLNKQ8WV28 456 aa14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 MAP1LC3BQ9GZQ8 125 aa14.74□□□□□ -0.05
SHROOM3-209ENST00000490690 KIR2DL5BA0A0G2JN68 375 aa14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 KIR2DL5BA0A0G2JPC4 375 aa14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 DUSP14O95147 198 aaKnown RBP14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 HBE1P02100 147 aa14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 GCHFRP30047 84 aa14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 CSN1S1P47710 185 aa14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 KIR2DL5AQ8N109 375 aa14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 ARL6IP6Q8N6S5 226 aa14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 KIR2DL5BQ8NHK3 375 aa14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 RXFP4Q8TDU9 374 aa14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 C17orf77Q96MU5 243 aa14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 NKX6-2Q9C056 277 aaPredicted RBP14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 SAV1Q9H4B6 383 aaPredicted RBP14.73□□□□□ -0.05
SHROOM3-209ENST00000490690 TRAV8-2A0A0B4J237 113 aa14.72□□□□□ -0.05
SHROOM3-209ENST00000490690 H2AFB1P0C5Y9 115 aa14.72□□□□□ -0.05
SHROOM3-209ENST00000490690 HLA-DRB4P13762 266 aa14.72□□□□□ -0.05
SHROOM3-209ENST00000490690 MORN3Q6PF18 240 aaPredicted RBP14.72□□□□□ -0.05
SHROOM3-209ENST00000490690 APRG1Q8IVJ8 170 aa14.72□□□□□ -0.05
SHROOM3-209ENST00000490690 SUN5Q8TC36 379 aa14.72□□□□□ -0.05
SHROOM3-209ENST00000490690 MBD3L1Q8WWY6 194 aa14.72□□□□□ -0.05
SHROOM3-209ENST00000490690 ZNF503Q96F45 646 aa14.72□□□□□ -0.05
SHROOM3-209ENST00000490690 CLUHP3Q96NS8 147 aa14.72□□□□□ -0.05
SHROOM3-209ENST00000490690 HLA-DRB4X5D2U9 266 aa14.72□□□□□ -0.05
SHROOM3-209ENST00000490690 UBE2CO00762 179 aa14.71□□□□□ -0.05
SHROOM3-209ENST00000490690 HMGB3O15347 200 aaKnown RBP14.71□□□□□ -0.05
SHROOM3-209ENST00000490690 ACTL10Q5JWF8 245 aa14.71□□□□□ -0.05
SHROOM3-209ENST00000490690 IQCF2Q8IXL9 164 aa14.71□□□□□ -0.05
SHROOM3-209ENST00000490690 OTORQ9NRC9 128 aa14.71□□□□□ -0.05
SHROOM3-209ENST00000490690 ARL2-SNX15V9GYD0 113 aa14.71□□□□□ -0.05
SHROOM3-209ENST00000490690 DNAH3Q8TD57 4116 aa14.7□□□□□ -0.06
SHROOM3-209ENST00000490690 SLC17A3O00476 420 aa14.7□□□□□ -0.06
SHROOM3-209ENST00000490690 FRMD6-AS1P0C7T7 363 aa14.7□□□□□ -0.06
SHROOM3-209ENST00000490690 ZNF726P1Q15940 193 aa14.7□□□□□ -0.06
SHROOM3-209ENST00000490690 OR10J6PQ8NGY7 276 aa14.7□□□□□ -0.06
SHROOM3-209ENST00000490690 CMTM2Q8TAZ6 248 aa14.7□□□□□ -0.06
SHROOM3-209ENST00000490690 SFT2D1Q8WV19 159 aa14.7□□□□□ -0.06
SHROOM3-209ENST00000490690 RPUSD4Q96CM3 377 aaKnown RBP14.7□□□□□ -0.06
SHROOM3-209ENST00000490690 WFDC10AQ9H1F0 79 aa14.7□□□□□ -0.06
SHROOM3-209ENST00000490690 FBN3Q75N90 2809 aa14.7□□□□□ -0.06
SHROOM3-209ENST00000490690 A0A1W2PRE2 83 aa14.69□□□□□ -0.06
SHROOM3-209ENST00000490690 H3BTX0 84 aa14.69□□□□□ -0.06
SHROOM3-209ENST00000490690 BOLA2-SMG1P6H3BVE0 249 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms