RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	MUC7	Q8TAX7	377 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663	LRRC20	Q8TCA0	184 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663	RPRM	Q9NS64	109 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663	XCL2	Q9UBD3	114 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663	TP53TG1	Q9Y2A0	90 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663		A0A0J9YX75	114 aa		13.54	□□□□□ -0.24
C4A-256	ENST00000490663	DEFB4A	O15263	64 aa		13.54	□□□□□ -0.24
C4A-256	ENST00000490663	IFNA5	P01569	189 aa		13.54	□□□□□ -0.24
C4A-256	ENST00000490663	SPP1	P10451	314 aa		13.54	□□□□□ -0.24
C4A-256	ENST00000490663	FFAR4	Q5NUL3	377 aa		13.54	□□□□□ -0.24
C4A-256	ENST00000490663	FAM78B	Q5VT40	261 aa		13.54	□□□□□ -0.24
C4A-256	ENST00000490663	OR11H2	Q8NH07	326 aa		13.54	□□□□□ -0.24
C4A-256	ENST00000490663	SCGB1C1	Q8TD33	95 aa		13.54	□□□□□ -0.24
C4A-256	ENST00000490663	SLC35B3	Q9H1N7	401 aa		13.54	□□□□□ -0.24
C4A-256	ENST00000490663	IGLC2	P0DOY2	106 aa		13.53	□□□□□ -0.24
C4A-256	ENST00000490663	MORN3	Q6PF18	240 aa	Predicted RBP	13.53	□□□□□ -0.24
C4A-256	ENST00000490663	GATAD1	Q8WUU5	269 aa		13.53	□□□□□ -0.24
C4A-256	ENST00000490663	AQP10	Q96PS8	301 aa		13.53	□□□□□ -0.24
C4A-256	ENST00000490663	RARRES2	Q99969	163 aa		13.53	□□□□□ -0.24
C4A-256	ENST00000490663	SLC25A2	Q9BXI2	301 aa		13.53	□□□□□ -0.24
C4A-256	ENST00000490663	RNF222	A6NCQ9	220 aa		13.52	□□□□□ -0.25
C4A-256	ENST00000490663	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.52	□□□□□ -0.25
C4A-256	ENST00000490663	C17orf112	F2Z3M2	114 aa		13.52	□□□□□ -0.25
C4A-256	ENST00000490663	EBLN2	Q6P2I7	272 aa		13.52	□□□□□ -0.25
C4A-256	ENST00000490663	LCN15	Q6UWW0	184 aa		13.52	□□□□□ -0.25
C4A-256	ENST00000490663	ZNF586	Q9NXT0	402 aa		13.52	□□□□□ -0.25
C4A-256	ENST00000490663	PSG3	Q16557	428 aa		13.51	□□□□□ -0.25
C4A-256	ENST00000490663	SAMD13	Q5VXD3	122 aa		13.51	□□□□□ -0.25
C4A-256	ENST00000490663	HSD17B11	Q8NBQ5	300 aa		13.51	□□□□□ -0.25
C4A-256	ENST00000490663	BLNK	Q8WV28	456 aa		13.51	□□□□□ -0.25
C4A-256	ENST00000490663	MFF	Q9GZY8	342 aa		13.51	□□□□□ -0.25
C4A-256	ENST00000490663	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.51	□□□□□ -0.25
C4A-256	ENST00000490663	KCNIP2	Q9NS61	270 aa		13.51	□□□□□ -0.25
C4A-256	ENST00000490663	STARD9	Q9P2P6	4700 aa		13.5	□□□□□ -0.25
C4A-256	ENST00000490663	CNN1	P51911	297 aa	Known RBP	13.5	□□□□□ -0.25
C4A-256	ENST00000490663	HIST1H1A	Q02539	215 aa	Predicted RBP	13.5	□□□□□ -0.25
C4A-256	ENST00000490663	CSNK1G2-AS1	Q8NCQ2	148 aa		13.5	□□□□□ -0.25
C4A-256	ENST00000490663	FAM167A-AS1	Q96KT0	104 aa		13.5	□□□□□ -0.25
C4A-256	ENST00000490663	TNFSF18	Q9UNG2	199 aa		13.5	□□□□□ -0.25
C4A-256	ENST00000490663	RNF24	Q9Y225	148 aa		13.5	□□□□□ -0.25
C4A-256	ENST00000490663	PRAC2	D3DTV9	90 aa		13.49	□□□□□ -0.25
C4A-256	ENST00000490663	OR10J4	P0C629	311 aa		13.49	□□□□□ -0.25
C4A-256	ENST00000490663	RAB2A	P61019	212 aa		13.49	□□□□□ -0.25
C4A-256	ENST00000490663	ASB13	Q8WXK3	278 aa		13.49	□□□□□ -0.25
C4A-256	ENST00000490663	SAT2	Q96F10	170 aa	Predicted RBP	13.49	□□□□□ -0.25
C4A-256	ENST00000490663	SLC50A1	Q9BRV3	221 aa		13.49	□□□□□ -0.25
C4A-256	ENST00000490663	HRH4	Q9H3N8	390 aa		13.49	□□□□□ -0.25
C4A-256	ENST00000490663	IGHV3OR16-12	A0A075B7B8	117 aa		13.48	□□□□□ -0.25
C4A-256	ENST00000490663	PMS2P11	Q13670	270 aa		13.48	□□□□□ -0.25
C4A-256	ENST00000490663	AMTN	Q6UX39	209 aa		13.48	□□□□□ -0.25
C4A-256	ENST00000490663	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.48	□□□□□ -0.25
C4A-256	ENST00000490663	RPUSD4	Q96CM3	377 aa	Known RBP	13.48	□□□□□ -0.25
C4A-256	ENST00000490663	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.48	□□□□□ -0.25
C4A-256	ENST00000490663	SH3BGRL3	Q9H299	93 aa		13.48	□□□□□ -0.25
C4A-256	ENST00000490663	FUT9	Q9Y231	359 aa		13.48	□□□□□ -0.25
C4A-256	ENST00000490663		X6R8D5	127 aa		13.48	□□□□□ -0.25
C4A-256	ENST00000490663		M0R2Z0	102 aa		13.47	□□□□□ -0.25
C4A-256	ENST00000490663	ARPC5	O15511	151 aa		13.47	□□□□□ -0.25
C4A-256	ENST00000490663	NDUFB4	O95168	129 aa		13.47	□□□□□ -0.25
C4A-256	ENST00000490663	CXCL2	P19875	107 aa		13.47	□□□□□ -0.25
C4A-256	ENST00000490663	PSG9	Q00887	426 aa		13.47	□□□□□ -0.25
C4A-256	ENST00000490663	SPINK13	Q1W4C9	94 aa		13.47	□□□□□ -0.25
C4A-256	ENST00000490663	CASC10	Q5T4H9	136 aa		13.47	□□□□□ -0.25
C4A-256	ENST00000490663	RPL7L1	Q6DKI1	246 aa	Known RBP	13.47	□□□□□ -0.25
C4A-256	ENST00000490663	FAM122C	Q6P4D5	195 aa		13.47	□□□□□ -0.25
C4A-256	ENST00000490663	OR8A1	Q8NGG7	326 aa		13.47	□□□□□ -0.25
C4A-256	ENST00000490663	MRPL32	Q9BYC8	188 aa	Known RBP	13.47	□□□□□ -0.25
C4A-256	ENST00000490663	TMEM14C	Q9P0S9	112 aa		13.47	□□□□□ -0.25
C4A-256	ENST00000490663	TRBV19	A0A075B6N1	114 aa		13.46	□□□□□ -0.25
C4A-256	ENST00000490663	IGHV4-28	A0A0C4DH34	117 aa		13.46	□□□□□ -0.25
C4A-256	ENST00000490663	C3orf84	H3BNL1	204 aa		13.46	□□□□□ -0.25
C4A-256	ENST00000490663		M0R3E3	92 aa		13.46	□□□□□ -0.25
C4A-256	ENST00000490663	HMGB3	O15347	200 aa	Known RBP	13.46	□□□□□ -0.25
C4A-256	ENST00000490663	OR7C2	O60412	319 aa		13.46	□□□□□ -0.25
C4A-256	ENST00000490663	ATP6V0C	P27449	155 aa		13.46	□□□□□ -0.25
C4A-256	ENST00000490663	NUTF2	P61970	127 aa	Known RBP	13.46	□□□□□ -0.25
C4A-256	ENST00000490663	EXOC3-AS1	Q8N2X6	119 aa		13.46	□□□□□ -0.25
C4A-256	ENST00000490663		Q8NAQ8	132 aa		13.46	□□□□□ -0.25
C4A-256	ENST00000490663	IL17D	Q8TAD2	202 aa		13.46	□□□□□ -0.25
C4A-256	ENST00000490663	ZNF503	Q96F45	646 aa		13.46	□□□□□ -0.25
C4A-256	ENST00000490663		A8MTW9	85 aa		13.45	□□□□□ -0.26
C4A-256	ENST00000490663	RBMY1A1	P0DJD3	496 aa	Known RBP	13.45	□□□□□ -0.26
C4A-256	ENST00000490663	RBMY1C	P0DJD4	496 aa		13.45	□□□□□ -0.26
C4A-256	ENST00000490663	HIST1H1E	P10412	219 aa	Known RBP	13.45	□□□□□ -0.26
C4A-256	ENST00000490663	RHOB	P62745	196 aa		13.45	□□□□□ -0.26
C4A-256	ENST00000490663	RBMY1F	Q15415	496 aa	Known RBP	13.45	□□□□□ -0.26
C4A-256	ENST00000490663	BAP18	Q8IXM2	172 aa		13.45	□□□□□ -0.26
C4A-256	ENST00000490663	FXYD5	Q96DB9	178 aa		13.45	□□□□□ -0.26
C4A-256	ENST00000490663	PHYHIPL	Q96FC7	376 aa		13.45	□□□□□ -0.26
C4A-256	ENST00000490663	PAXX	Q9BUH6	204 aa		13.45	□□□□□ -0.26
C4A-256	ENST00000490663	C1QTNF4	Q9BXJ3	329 aa		13.45	□□□□□ -0.26
C4A-256	ENST00000490663	OR51M1	Q9H341	326 aa		13.45	□□□□□ -0.26
C4A-256	ENST00000490663	TIMM9	Q9Y5J7	89 aa		13.45	□□□□□ -0.26
C4A-256	ENST00000490663	TRAV12-2	A0A075B6T6	113 aa		13.44	□□□□□ -0.26
C4A-256	ENST00000490663	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.44	□□□□□ -0.26
C4A-256	ENST00000490663	DUSP14	O95147	198 aa	Known RBP	13.44	□□□□□ -0.26
C4A-256	ENST00000490663	ZNF266	Q14584	549 aa		13.44	□□□□□ -0.26
C4A-256	ENST00000490663	TMEM41B	Q5BJD5	291 aa		13.44	□□□□□ -0.26
C4A-256	ENST00000490663	OR11H4	Q8NGC9	324 aa		13.44	□□□□□ -0.26
C4A-256	ENST00000490663	hCG_2014768	A0A024R1R8	64 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms