RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 NUDT15Q9NV35 164 aa12.54□□□□□ -0.4
YIPF3-208ENST00000490447 HYPMO75409 117 aa12.53□□□□□ -0.4
YIPF3-208ENST00000490447 NUDT3O95989 172 aa12.53□□□□□ -0.4
YIPF3-208ENST00000490447 H2AFB2P0C5Z0 115 aa12.53□□□□□ -0.4
YIPF3-208ENST00000490447 OR5G3P0C626 314 aa12.53□□□□□ -0.4
YIPF3-208ENST00000490447 LINC00869P0C866 280 aa12.53□□□□□ -0.4
YIPF3-208ENST00000490447 HIST1H1AQ02539 215 aaPredicted RBP12.53□□□□□ -0.4
YIPF3-208ENST00000490447 TMEM256Q8N2U0 113 aa12.53□□□□□ -0.4
YIPF3-208ENST00000490447 LINC01587Q99440 93 aa12.53□□□□□ -0.4
YIPF3-208ENST00000490447 MARVELD1Q9BSK0 173 aa12.53□□□□□ -0.4
YIPF3-208ENST00000490447 SHANK2-AS3Q9BTD1 123 aa12.53□□□□□ -0.4
YIPF3-208ENST00000490447 C20orf85Q9H1P6 137 aa12.53□□□□□ -0.4
YIPF3-208ENST00000490447 ATP5G1P05496 136 aa12.52□□□□□ -0.41
YIPF3-208ENST00000490447 HTN1P15515 57 aa12.52□□□□□ -0.41
YIPF3-208ENST00000490447 ATP5G3P48201 142 aa12.52□□□□□ -0.41
YIPF3-208ENST00000490447 SELENOTP62341 195 aa12.52□□□□□ -0.41
YIPF3-208ENST00000490447 PSENENQ9NZ42 101 aa12.52□□□□□ -0.41
YIPF3-208ENST00000490447 TRAV6A0A075B6T7 132 aa12.51□□□□□ -0.41
YIPF3-208ENST00000490447 CCL18P55774 89 aa12.51□□□□□ -0.41
YIPF3-208ENST00000490447 UBE2MP61081 183 aaKnown RBP12.51□□□□□ -0.41
YIPF3-208ENST00000490447 POLR2GP62487 172 aaKnown RBP eCLIP12.51□□□□□ -0.41
YIPF3-208ENST00000490447 OR8A1Q8NGG7 326 aa12.51□□□□□ -0.41
YIPF3-208ENST00000490447 C16orf74Q96GX8 76 aa12.51□□□□□ -0.41
YIPF3-208ENST00000490447 RNF24Q9Y225 148 aa12.51□□□□□ -0.41
YIPF3-208ENST00000490447 INMT-MINDY4F8WBC2 141 aa12.5□□□□□ -0.41
YIPF3-208ENST00000490447 SSSCA1O60232 199 aa12.5□□□□□ -0.41
YIPF3-208ENST00000490447 CXCL3P19876 107 aa12.5□□□□□ -0.41
YIPF3-208ENST00000490447 AZU1P20160 251 aa12.5□□□□□ -0.41
YIPF3-208ENST00000490447 TAS2R60P59551 318 aa12.5□□□□□ -0.41
YIPF3-208ENST00000490447 ID3Q02535 119 aa12.5□□□□□ -0.41
YIPF3-208ENST00000490447 FCN2Q15485 313 aa12.5□□□□□ -0.41
YIPF3-208ENST00000490447 UHRF2Q96PU4 802 aa12.5□□□□□ -0.41
YIPF3-208ENST00000490447 ABCA13Q86UQ4 5058 aa12.5□□□□□ -0.41
YIPF3-208ENST00000490447 A0A087X0K7 114 aa12.49□□□□□ -0.41
YIPF3-208ENST00000490447 NBDYA0A0U1RRE5 68 aa12.49□□□□□ -0.41
YIPF3-208ENST00000490447 CBY3A6NI87 242 aa12.49□□□□□ -0.41
YIPF3-208ENST00000490447 PRAF2O60831 178 aa12.49□□□□□ -0.41
YIPF3-208ENST00000490447 ADAP1O75689 374 aa12.49□□□□□ -0.41
YIPF3-208ENST00000490447 ANXA7P20073 488 aaKnown RBP12.49□□□□□ -0.41
YIPF3-208ENST00000490447 RRAS2P62070 204 aaPredicted RBP12.49□□□□□ -0.41
YIPF3-208ENST00000490447 PSG3Q16557 428 aa12.49□□□□□ -0.41
YIPF3-208ENST00000490447 C6orf223Q8N319 242 aa12.49□□□□□ -0.41
YIPF3-208ENST00000490447 ARL6Q9H0F7 186 aa12.49□□□□□ -0.41
YIPF3-208ENST00000490447 MGAT4CQ9UBM8 478 aa12.49□□□□□ -0.41
YIPF3-208ENST00000490447 FLVCR2Q9UPI3 526 aa12.49□□□□□ -0.41
YIPF3-208ENST00000490447 TIMM8BQ9Y5J9 83 aaPredicted RBP12.49□□□□□ -0.41
YIPF3-208ENST00000490447 NACAE9PAV3 2078 aa12.49□□□□□ -0.41
YIPF3-208ENST00000490447 PLAC8L1A1L4L8 177 aa12.48□□□□□ -0.41
YIPF3-208ENST00000490447 C9orf170A2RU37 121 aa12.48□□□□□ -0.41
YIPF3-208ENST00000490447 C16orf90A8MZG2 172 aa12.48□□□□□ -0.41
YIPF3-208ENST00000490447 PLP1P60201 277 aa12.48□□□□□ -0.41
YIPF3-208ENST00000490447 DLK1P80370 383 aa12.48□□□□□ -0.41
YIPF3-208ENST00000490447 CLINT1Q14677 625 aa12.48□□□□□ -0.41
YIPF3-208ENST00000490447 ZNRF2Q8NHG8 242 aa12.48□□□□□ -0.41
YIPF3-208ENST00000490447 NPVFQ9HCQ7 196 aa12.48□□□□□ -0.41
YIPF3-208ENST00000490447 HSPG2P98160 4391 aa12.48□□□□□ -0.41
YIPF3-208ENST00000490447 CDKN1BP46527 198 aa12.47□□□□□ -0.41
YIPF3-208ENST00000490447 TNP2Q05952 138 aa12.47□□□□□ -0.41
YIPF3-208ENST00000490447 TEPPQ6URK8 271 aa12.47□□□□□ -0.41
YIPF3-208ENST00000490447 OR10P1Q8NGE3 313 aa12.47□□□□□ -0.41
YIPF3-208ENST00000490447 RPUSD4Q96CM3 377 aaKnown RBP12.47□□□□□ -0.41
YIPF3-208ENST00000490447 ARV1Q9H2C2 271 aa12.47□□□□□ -0.41
YIPF3-208ENST00000490447 GPN1Q9HCN4 374 aaPredicted RBP12.47□□□□□ -0.41
YIPF3-208ENST00000490447 SCGB1D2O95969 90 aa12.46□□□□□ -0.41
YIPF3-208ENST00000490447 METTL15P1P0C7V9 234 aa12.46□□□□□ -0.41
YIPF3-208ENST00000490447 CXCL2P19875 107 aa12.46□□□□□ -0.41
YIPF3-208ENST00000490447 C4orf46Q504U0 113 aa12.46□□□□□ -0.41
YIPF3-208ENST00000490447 LCN15Q6UWW0 184 aa12.46□□□□□ -0.41
YIPF3-208ENST00000490447 Q6ZNX1 250 aa12.46□□□□□ -0.41
YIPF3-208ENST00000490447 ZNF493Q6ZR52 646 aa12.46□□□□□ -0.41
YIPF3-208ENST00000490447 TMEM263Q8WUH6 116 aaKnown RBP12.46□□□□□ -0.41
YIPF3-208ENST00000490447 SMIM8Q96KF7 97 aa12.46□□□□□ -0.41
YIPF3-208ENST00000490447 PMS2P5A8MQ11 134 aa12.45□□□□□ -0.42
YIPF3-208ENST00000490447 FNDC10F2Z333 226 aa12.45□□□□□ -0.42
YIPF3-208ENST00000490447 H7BYZ3 331 aa12.45□□□□□ -0.42
YIPF3-208ENST00000490447 GOSR2O14653 212 aa12.45□□□□□ -0.42
YIPF3-208ENST00000490447 OR4E1P0C645 316 aa12.45□□□□□ -0.42
YIPF3-208ENST00000490447 SLC38A11Q08AI6 406 aa12.45□□□□□ -0.42
YIPF3-208ENST00000490447 PXDC1Q5TGL8 231 aa12.45□□□□□ -0.42
YIPF3-208ENST00000490447 OR10J6PQ8NGY7 276 aa12.45□□□□□ -0.42
YIPF3-208ENST00000490447 RNF141Q8WVD5 230 aa12.45□□□□□ -0.42
YIPF3-208ENST00000490447 SLC50A1Q9BRV3 221 aa12.45□□□□□ -0.42
YIPF3-208ENST00000490447 NOP10Q9NPE3 64 aaKnown RBP12.45□□□□□ -0.42
YIPF3-208ENST00000490447 MUC4Q99102 2169 aa12.45□□□□□ -0.42
YIPF3-208ENST00000490447 CCNKO75909 580 aa12.44□□□□□ -0.42
YIPF3-208ENST00000490447 PRB4P10163 310 aaPredicted RBP12.44□□□□□ -0.42
YIPF3-208ENST00000490447 TMEM14EPQ6UXP3 125 aa12.44□□□□□ -0.42
YIPF3-208ENST00000490447 LINC00305Q7Z4B0 112 aa12.44□□□□□ -0.42
YIPF3-208ENST00000490447 ZNF546Q86UE3 836 aa12.44□□□□□ -0.42
YIPF3-208ENST00000490447 LINC00588Q9Y4M8 146 aa12.44□□□□□ -0.42
YIPF3-208ENST00000490447 LRP1BQ9NZR2 4599 aa12.44□□□□□ -0.42
YIPF3-208ENST00000490447 K7EPK0 472 aa12.43□□□□□ -0.42
YIPF3-208ENST00000490447 OR5I1Q13606 314 aa12.43□□□□□ -0.42
YIPF3-208ENST00000490447 PATE2Q6UY27 113 aa12.43□□□□□ -0.42
YIPF3-208ENST00000490447 SSX7Q7RTT5 188 aa12.43□□□□□ -0.42
YIPF3-208ENST00000490447 BPIFA4PQ86YQ2 179 aa12.43□□□□□ -0.42
YIPF3-208ENST00000490447 CCDC28AQ8IWP9 274 aa12.43□□□□□ -0.42
YIPF3-208ENST00000490447 RNASE8Q8TDE3 154 aaKnown RBP12.43□□□□□ -0.42
YIPF3-208ENST00000490447 C20orf144Q9BQM9 153 aa12.43□□□□□ -0.42
YIPF3-208ENST00000490447 C7orf66A4D0T2 115 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms