RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 HIST1H2BOP23527 126 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 HIST1H2BBP33778 126 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 HIST1H2BDP58876 126 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 HIST1H2BCP62807 126 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 HIST2H2BEQ16778 126 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 FRZBQ92765 325 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 HIST1H2BHQ93079 126 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 HIST1H2BNQ99877 126 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 HIST1H2BMQ99879 126 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 AAMDCQ9H7C9 122 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 IGHV3-35A0A0C4DH35 117 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 SMIM27A0A1W2PRY6 76 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 DIRC3C9JPN6 131 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 K7EQM0 130 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 IGHG4P01861 327 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 ARL3P36405 182 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 FAM209BQ5JX69 171 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 HIST2H2BCQ6DN03 193 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 TMEM183AQ8IXX5 376 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 NUDT10Q8NFP7 164 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 NUDT11Q96G61 164 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 METTL26Q96S19 204 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 KLK15Q9H2R5 256 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 ZNF492Q9P255 531 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 ZFP30Q9Y2G7 519 aa10.49□□□□□ -0.73
RIPPLY3-203ENST00000490393 NDUFA4O00483 81 aa10.48□□□□□ -0.73
RIPPLY3-203ENST00000490393 TRGC1P0CF51 173 aa10.48□□□□□ -0.73
RIPPLY3-203ENST00000490393 RPL15P61313 204 aaKnown RBP10.48□□□□□ -0.73
RIPPLY3-203ENST00000490393 ACTL10Q5JWF8 245 aa10.48□□□□□ -0.73
RIPPLY3-203ENST00000490393 GOLT1AQ6ZVE7 132 aa10.48□□□□□ -0.73
RIPPLY3-203ENST00000490393 WFDC11Q8NEX6 87 aa10.48□□□□□ -0.73
RIPPLY3-203ENST00000490393 FOXC2Q99958 501 aa10.48□□□□□ -0.73
RIPPLY3-203ENST00000490393 RPH3ALQ9UNE2 315 aa10.48□□□□□ -0.73
RIPPLY3-203ENST00000490393 FBLL1A6NHQ2 334 aaKnown RBP10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 GATCO43716 136 aaKnown RBP10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 PF4V1P10720 104 aa10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 MEOX2P50222 304 aa10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 RPL19P84098 196 aaKnown RBP10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 Q86TA4 180 aa10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 NHLRC2Q8NBF2 726 aa10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 GRAMD2BQ96HH9 432 aa10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 PRSS22Q9GZN4 317 aa10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 C19orf71A6NCJ1 209 aa10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 ZNF705GA8MUZ8 300 aaPredicted RBP10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 HOXA5P20719 270 aa10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 PSMB8P28062 276 aa10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 CSN1S1P47710 185 aa10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 PSG3Q16557 428 aa10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 ZNF331Q9NQX6 463 aaPredicted RBP10.47□□□□□ -0.73
RIPPLY3-203ENST00000490393 FABP9Q0Z7S8 132 aa10.46□□□□□ -0.74
RIPPLY3-203ENST00000490393 CT83Q5H943 113 aa10.46□□□□□ -0.74
RIPPLY3-203ENST00000490393 OR4X2Q8NGF9 303 aa10.46□□□□□ -0.74
RIPPLY3-203ENST00000490393 SGK494Q96LW2 274 aa10.46□□□□□ -0.74
RIPPLY3-203ENST00000490393 PSG8Q9UQ74 426 aa10.46□□□□□ -0.74
RIPPLY3-203ENST00000490393 IGHV3OR16-8A0A075B7F1 116 aa10.45□□□□□ -0.74
RIPPLY3-203ENST00000490393 COX19Q49B96 90 aa10.45□□□□□ -0.74
RIPPLY3-203ENST00000490393 CIARTQ8N365 385 aaPredicted RBP10.45□□□□□ -0.74
RIPPLY3-203ENST00000490393 SERTAD4Q9NUC0 356 aa10.45□□□□□ -0.74
RIPPLY3-203ENST00000490393 ZANQ9Y493 2812 aa10.45□□□□□ -0.74
RIPPLY3-203ENST00000490393 TRAV8-1A0A0A6YYK1 113 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 ZNF785A8K8V0 405 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 M0R3E3 92 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 HOXA3O43365 443 aaPredicted RBP10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 TRBV12-3P01733 135 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 NDUFA6P56556 154 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 SMUG1Q53HV7 270 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 C16orf54Q6UWD8 224 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 COX8CQ7Z4L0 72 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 PRNTQ86SH4 94 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 TMEM86BQ8N661 226 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 TSKUQ8WUA8 353 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 SLC50A1Q9BRV3 221 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 NPFFR1Q9GZQ6 430 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 TRAPPC1Q9Y5R8 145 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 IZUMO1RA6ND01 250 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 NPIPB6E9PJ23 425 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 APOHP02749 345 aaPredicted RBP10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 LINC00322Q6ZN03 302 aaPredicted RBP10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 Q8N2B8 174 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 GNB1LQ9BYB4 327 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 ZNF702PQ9H963 129 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 CLEC5AQ9NY25 188 aa10.44□□□□□ -0.74
RIPPLY3-203ENST00000490393 CDX1P47902 265 aaPredicted RBP10.43□□□□□ -0.74
RIPPLY3-203ENST00000490393 COA6Q5JTJ3 125 aaKnown RBP10.43□□□□□ -0.74
RIPPLY3-203ENST00000490393 PEF1Q9UBV8 284 aaKnown RBP10.43□□□□□ -0.74
RIPPLY3-203ENST00000490393 CREBBPQ92793 2442 aa10.43□□□□□ -0.74
RIPPLY3-203ENST00000490393 ZNF469Q96JG9 3925 aaPredicted RBP10.43□□□□□ -0.74
RIPPLY3-203ENST00000490393 FAM231BA6NCW3 169 aa10.42□□□□□ -0.74
RIPPLY3-203ENST00000490393 IGHV3-11P01762 117 aa10.42□□□□□ -0.74
RIPPLY3-203ENST00000490393 ELANEP08246 267 aa10.42□□□□□ -0.74
RIPPLY3-203ENST00000490393 TMEM95Q3KNT9 176 aa10.42□□□□□ -0.74
RIPPLY3-203ENST00000490393 PRR27Q6MZM9 219 aa10.42□□□□□ -0.74
RIPPLY3-203ENST00000490393 RASL11AQ6T310 242 aa10.42□□□□□ -0.74
RIPPLY3-203ENST00000490393 OR4B1Q8NGF8 309 aa10.42□□□□□ -0.74
RIPPLY3-203ENST00000490393 GLMPQ8WWB7 406 aa10.42□□□□□ -0.74
RIPPLY3-203ENST00000490393 MRPL53Q96EL3 112 aaKnown RBP10.42□□□□□ -0.74
RIPPLY3-203ENST00000490393 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
RIPPLY3-203ENST00000490393 GFRA4Q9GZZ7 299 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms