RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 PTTG2Q9NZH5 202 aa5.64□□□□□ -1.51
USP39-216ENST00000490193 SHPKQ9UHJ6 478 aa5.64□□□□□ -1.51
USP39-216ENST00000490193 FLG2Q5D862 2391 aaPredicted RBP5.64□□□□□ -1.51
USP39-216ENST00000490193 FAM25AB3EWG3 89 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 FAM25CB3EWG5 89 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 FAM25GB3EWG6 89 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 PRSS46E5RG02 174 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 ADAP1O75689 374 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 ZNF182P17025 639 aaPredicted RBP5.63□□□□□ -1.51
USP39-216ENST00000490193 HOXA5P20719 270 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 S100A7P31151 101 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 NCS1P62166 190 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 RNF182Q8N6D2 247 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 OR8A1Q8NGG7 326 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 C20orf144Q9BQM9 153 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 NOP10Q9NPE3 64 aaKnown RBP5.63□□□□□ -1.51
USP39-216ENST00000490193 EXTL2Q9UBQ6 330 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 KCNIP3Q9Y2W7 256 aa5.63□□□□□ -1.51
USP39-216ENST00000490193 A0A087X0K7 114 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 DISC1C4P0D8 188 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 H3BRN7 92 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 H7BYZ3 331 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 PITX3O75364 302 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 ATP6V1G2O95670 118 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 AKR1C4P17516 323 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 CXCL3P19876 107 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 CDKN1BP46527 198 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 ERVFC1-1P60608 527 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 VBP1P61758 197 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 RAB11AP62491 216 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 DLK1P80370 383 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 MRPS10P82664 201 aaKnown RBP5.62□□□□□ -1.51
USP39-216ENST00000490193 OR5I1Q13606 314 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 C21orf62-AS1Q17RA5 79 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 IGFL4Q6B9Z1 124 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 FAAP20Q6NZ36 180 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 LYZL2Q7Z4W2 148 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 ZNF738Q8NE65 137 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 BPIFCQ8NFQ6 507 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 OR1S1Q8NH92 325 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 TMEM147Q9BVK8 224 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 VCX3AQ9NNX9 186 aa5.62□□□□□ -1.51
USP39-216ENST00000490193 A0A087WXM4 84 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 A0A096LPF7 62 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 A0A0J9YY99 117 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 EREGO14944 169 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 S100A6P06703 90 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 RPL7P18124 248 aaKnown RBP5.61□□□□□ -1.51
USP39-216ENST00000490193 ORM2P19652 201 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 RHOBP62745 196 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 SRPXP78539 464 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 HIST1H1AQ02539 215 aaPredicted RBP5.61□□□□□ -1.51
USP39-216ENST00000490193 PSG3Q16557 428 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 TMEM182Q6ZP80 229 aaPredicted RBP5.61□□□□□ -1.51
USP39-216ENST00000490193 AP3S1Q92572 193 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 C18orf15Q96N68 181 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 PRRT1Q99946 306 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 SHANK2-AS3Q9BTD1 123 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 FUNDC2Q9BWH2 189 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 PRR13Q9NZ81 148 aa5.61□□□□□ -1.51
USP39-216ENST00000490193 PIGBOS1A0A0B4J2F0 54 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 DUXBA0A1W2PPF3 345 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 SIVA1O15304 175 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 EIF4EBP3O60516 100 aaPredicted RBP5.6□□□□□ -1.51
USP39-216ENST00000490193 RLN2P04090 185 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 AKAIN1P0CW23 69 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 SLC25A6P12236 298 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 HTN1P15515 57 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 GATA2P23769 480 aaPredicted RBP5.6□□□□□ -1.51
USP39-216ENST00000490193 PLP1P60201 277 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 KRTAP10-1P60331 282 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 ICAM4Q14773 271 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 SMIM4Q8WVI0 70 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 VSIG2Q96IQ7 327 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 CIB3Q96Q77 187 aaPredicted RBP5.6□□□□□ -1.51
USP39-216ENST00000490193 PPP1R14DQ9NXH3 145 aa5.6□□□□□ -1.51
USP39-216ENST00000490193 A0A087WTM6 91 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 GAGE12BA1L429 117 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 CTDSPLO15194 276 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 GAGE7O76087 117 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 IFNA5P01569 189 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 GAGE12FP0CL80 117 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 GAGE12GP0CL81 117 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 GAGE12IP0CL82 117 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 IAPPP10997 89 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 ANXA3P12429 323 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 CXCL2P19875 107 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 RPP30P78346 268 aaKnown RBP5.59□□□□□ -1.51
USP39-216ENST00000490193 FGL1Q08830 312 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 DAZ2Q13117 558 aaKnown RBP5.59□□□□□ -1.51
USP39-216ENST00000490193 MAJINQ3KP22 176 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 GFI1BQ5VTD9 330 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 ACOT7LQ6ZUV0 252 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 NFE4Q86UQ8 179 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 CCDC28AQ8IWP9 274 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 OR51S1Q8NGJ8 323 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 RPUSD4Q96CM3 377 aaKnown RBP5.59□□□□□ -1.51
USP39-216ENST00000490193 SCGB3A2Q96PL1 93 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 MIXL1Q9H2W2 232 aa5.59□□□□□ -1.51
USP39-216ENST00000490193 TMPRSS5Q9H3S3 457 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms