RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 MMP23AO75900 390 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 IGHV3-11P01762 117 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 EVI2AP22794 236 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 UBE2V1Q13404 147 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 NOTCH4Q99466 2003 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 SH2D1AO60880 128 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 ESDP10768 282 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 Q8TCH9 128 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 ZNF876PQ49A33 203 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 LYZL1Q6UWQ5 148 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 Q6ZS92 163 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 GLRX5Q86SX6 157 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 SHANK2-AS3Q9BTD1 123 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 TIMM21Q9BVV7 248 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 TMEM14CQ9P0S9 112 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 USF3Q68DE3 2245 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 PRSS46E5RG02 174 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 IGKV1-5P01602 117 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 C6orf226Q5I0X4 101 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 C2orf82Q6UX34 121 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 LINC00311Q8N616 119 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 ST6GALNAC6Q969X2 333 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 FREM1Q5H8C1 2179 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 RIF1Q5UIP0 2472 aaKnown RBP7.22□□□□□ -1.25
LSAMP-205ENST00000490035 ETV2O00321 342 aaPredicted RBP7.22□□□□□ -1.25
LSAMP-205ENST00000490035 PAX4O43316 350 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 SLAQ13239 276 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 SCRT1Q9BWW7 348 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 UBE2E1P51965 193 aa7.21□□□□□ -1.25
LSAMP-205ENST00000490035 VWC2LB2RUY7 222 aa7.21□□□□□ -1.25
LSAMP-205ENST00000490035 SNAI2O43623 268 aa7.21□□□□□ -1.25
LSAMP-205ENST00000490035 GUSBP1Q15486 140 aa7.21□□□□□ -1.25
LSAMP-205ENST00000490035 GAFA1Q96PS6 74 aa7.21□□□□□ -1.25
LSAMP-205ENST00000490035 S4R3C0 116 aa7.21□□□□□ -1.25
LSAMP-205ENST00000490035 IGKV1-27A0A075B6S5 117 aa7.21□□□□□ -1.25
LSAMP-205ENST00000490035 FAM231DQ6ZW35 169 aa7.21□□□□□ -1.25
LSAMP-205ENST00000490035 CITED1Q99966 193 aa7.21□□□□□ -1.25
LSAMP-205ENST00000490035 RNASE2P10153 161 aaKnown RBP7.21□□□□□ -1.26
LSAMP-205ENST00000490035 ZNF124Q15973 351 aa7.21□□□□□ -1.26
LSAMP-205ENST00000490035 CACNA1HO95180 2353 aa7.21□□□□□ -1.26
LSAMP-205ENST00000490035 TMEM105Q8N8V8 129 aa7.21□□□□□ -1.26
LSAMP-205ENST00000490035 OR11H6Q8NGC7 330 aa7.21□□□□□ -1.26
LSAMP-205ENST00000490035 C15orf62A8K5M9 175 aa7.21□□□□□ -1.26
LSAMP-205ENST00000490035 HOXD3P31249 432 aaPredicted RBP7.21□□□□□ -1.26
LSAMP-205ENST00000490035 CDKN1AP38936 164 aa7.21□□□□□ -1.26
LSAMP-205ENST00000490035 ZNF329Q86UD4 541 aa7.21□□□□□ -1.26
LSAMP-205ENST00000490035 CD177Q8N6Q3 437 aa7.21□□□□□ -1.26
LSAMP-205ENST00000490035 CSTL1Q9H114 145 aa7.21□□□□□ -1.26
LSAMP-205ENST00000490035 ANAPC10Q9UM13 185 aa7.21□□□□□ -1.26
LSAMP-205ENST00000490035 PSPNO60542 156 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 REG4Q9BYZ8 158 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 H3BUA1 57 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 SRSF3P84103 164 aaKnown RBP7.2□□□□□ -1.26
LSAMP-205ENST00000490035 EXOC3-AS1Q8N2X6 119 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 GLMPQ8WWB7 406 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 IGKV2-40A0A087WW87 121 aaPredicted RBP7.2□□□□□ -1.26
LSAMP-205ENST00000490035 IGKV2D-40P01614 121 aaPredicted RBP7.2□□□□□ -1.26
LSAMP-205ENST00000490035 CXCL1P09341 107 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 DLEU1O43261 78 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 SPAG8Q99932 426 aaPredicted RBP7.2□□□□□ -1.26
LSAMP-205ENST00000490035 ADAMTS9Q9P2N4 1935 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 C8orf31Q8N9H6 132 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 LAMTOR3Q9UHA4 124 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 IGKV1D-8A0A087WSZ0 117 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 MLNRO43193 412 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 SAP30O75446 220 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 MST1P26927 711 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 TMEM249Q2WGJ8 235 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 CD300EQ496F6 205 aaPredicted RBP7.2□□□□□ -1.26
LSAMP-205ENST00000490035 PIP4P2Q8N4L2 257 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 RMI2Q96E14 147 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 NTF4P34130 210 aa7.2□□□□□ -1.26
LSAMP-205ENST00000490035 C2orf16Q68DN1 1984 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 MED13Q9UHV7 2174 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 A0A0G2JNJ9 132 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 TAL2Q16559 108 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 GATD1Q8NB37 220 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 FAM110DQ8TAY7 271 aaPredicted RBP7.19□□□□□ -1.26
LSAMP-205ENST00000490035 Q9UFV3 132 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 TRAV12-3A0A0B4J271 114 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 IGFL3Q6UXB1 125 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 Q86TA4 180 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 MCRIP2Q9BUT9 160 aaKnown RBP7.19□□□□□ -1.26
LSAMP-205ENST00000490035 IGHV1-24A0A0C4DH33 117 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 I3L3M4 83 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 CFHR2P36980 270 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 C20orf144Q9BQM9 153 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 F8W1H4 67 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 HGFACQ04756 655 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 LENEPQ9Y5L5 61 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 HTN3P15516 51 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 ZNF833PQ6ZTB9 187 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 SIVA1O15304 175 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 CLPSP04118 112 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 UBE2DNLQ8IWF7 75 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 TRGV1A0A0A0MS02 117 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 MUC21A0A0G2JKD1 596 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 MUC21A0A140T8X8 626 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 UTF1Q5T230 341 aa7.19□□□□□ -1.26
LSAMP-205ENST00000490035 KIAA1549Q9HCM3 1950 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms