RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 F6UB75 175 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 ISLRO14498 428 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 IFNA21P01568 189 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 AKAIN1P0CW23 69 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 ID1P41134 155 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 ALDH3B2P48448 385 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 FXYD7P58549 80 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 PSG9Q00887 426 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 FAM78BQ5VT40 261 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 GSG1LQ6UXU4 331 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 THAP8Q8NA92 274 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 TRGV9Q99603 122 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 PRRT1Q99946 306 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 SLC35B3Q9H1N7 401 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 RABL2AQ9UBK7 228 aaPredicted RBP4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 SHPKQ9UHJ6 478 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 RABL2BQ9UNT1 228 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 KCNIP3Q9Y2W7 256 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 DNAH5Q8TE73 4624 aa4.47□□□□□ -1.69
PRPF40A-210ENST00000489741 CRXO43186 299 aaPredicted RBP4.46□□□□□ -1.7
PRPF40A-210ENST00000489741 SLC25A6P12236 298 aa4.46□□□□□ -1.7
PRPF40A-210ENST00000489741 EMP1P54849 157 aa4.46□□□□□ -1.7
PRPF40A-210ENST00000489741 SPCS2Q15005 226 aa4.46□□□□□ -1.7
PRPF40A-210ENST00000489741 OR4B1Q8NGF8 309 aa4.46□□□□□ -1.7
PRPF40A-210ENST00000489741 TRIM63Q969Q1 353 aa4.46□□□□□ -1.7
PRPF40A-210ENST00000489741 LINC00052Q96N35 136 aa4.46□□□□□ -1.7
PRPF40A-210ENST00000489741 PBDC1Q9BVG4 233 aa4.46□□□□□ -1.7
PRPF40A-210ENST00000489741 APOBP04114 4563 aaKnown RBP4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 IGLV2-18A0A075B6J9 118 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 IGHV3OR16-12A0A075B7B8 117 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 TRAV8-2A0A0B4J237 113 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 DUXBA0A1W2PPF3 345 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 PLAC8L1A1L4L8 177 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 ZNF98A6NK75 572 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 ZFP92A6NM28 416 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 RGS5O15539 181 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 CFDP00746 253 aaPredicted RBP4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 HBE1P02100 147 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 PRM2P04554 102 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 FABP1P07148 127 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 TSPOP30536 169 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 MEOX2P50222 304 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 LYZP61626 148 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 RRN3P1Q2M238 152 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 C1orf134Q5TEV5 83 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 SAMD13Q5VXD3 122 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 EBLN2Q6P2I7 272 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 TMEM182Q6ZP80 229 aaPredicted RBP4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 CLVS1Q8IUQ0 354 aaPredicted RBP4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 OR8I2Q8N0Y5 310 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 LRTM2Q8N967 370 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 OR4D5Q8NGN0 318 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 DYNC2LI1Q8TCX1 351 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 DIRAS2Q96HU8 199 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 IGF2BP2-AS1Q96M15 143 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 SCGB3A2Q96PL1 93 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 RPRMQ9NS64 109 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 DOK5Q9P104 306 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 SCP2D1Q9UJQ7 156 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 GOLT1BQ9Y3E0 138 aa4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 YTHDF2Q9Y5A9 579 aaKnown RBP4.45□□□□□ -1.7
PRPF40A-210ENST00000489741 LYRM9A8MSI8 78 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 GAGE7O76087 117 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 GAGE12FP0CL80 117 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 GAGE12GP0CL81 117 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 GAGE12IP0CL82 117 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 AKR1C4P17516 323 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 DAD1P61803 113 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 SRPXP78539 464 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 GAGE1Q13065 139 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 GAGE4Q13068 117 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 OR2F1Q13607 317 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 IL18Q14116 193 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 TMEM128Q5BJH2 165 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 GGNBP1Q5YKI7 109 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 C15orf53Q8NAA6 179 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 ZBTB8BQ8NAP8 495 aaPredicted RBP4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 OR11H7Q8NGC8 314 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 ZNRF2Q8NHG8 242 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 COQ8AQ8NI60 647 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 SLC35E1Q96K37 410 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 ARPC5LQ9BPX5 153 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 RSG1Q9BU20 258 aa4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 SLIRPQ9GZT3 109 aaKnown RBP4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 CCDC59Q9P031 241 aaKnown RBP4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 RSL24D1Q9UHA3 163 aaKnown RBP4.44□□□□□ -1.7
PRPF40A-210ENST00000489741 PIGBOS1A0A0B4J2F0 54 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 CBY3A6NI87 242 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 ZNF705GA8MUZ8 300 aaPredicted RBP4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 M0R2Z0 102 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 CDK2AP2O75956 126 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 DUSP14O95147 198 aaKnown RBP4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 NDUFB4O95168 129 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 IAPPP10997 89 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 ANXA3P12429 323 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 AZU1P20160 251 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 GATA2P23769 480 aaPredicted RBP4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 GALR1P47211 349 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 CNN1P51911 297 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms