RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 LINC00869P0C866 280 aa8.35□□□□□ -1.07
SFXN3-207ENST00000489434 ANXA7P20073 488 aaKnown RBP8.35□□□□□ -1.07
SFXN3-207ENST00000489434 PSG3Q16557 428 aa8.35□□□□□ -1.07
SFXN3-207ENST00000489434 PYDC2Q56P42 97 aa8.35□□□□□ -1.07
SFXN3-207ENST00000489434 TMEM182Q6ZP80 229 aaPredicted RBP8.35□□□□□ -1.07
SFXN3-207ENST00000489434 SSX7Q7RTT5 188 aa8.35□□□□□ -1.07
SFXN3-207ENST00000489434 MCFD2Q8NI22 146 aa8.35□□□□□ -1.07
SFXN3-207ENST00000489434 DEDD2Q8WXF8 326 aa8.35□□□□□ -1.07
SFXN3-207ENST00000489434 SOSTQ9BQB4 213 aa8.35□□□□□ -1.07
SFXN3-207ENST00000489434 LINC00588Q9Y4M8 146 aa8.35□□□□□ -1.07
SFXN3-207ENST00000489434 A0A087X0K7 114 aa8.34□□□□□ -1.07
SFXN3-207ENST00000489434 PLAC8L1A1L4L8 177 aa8.34□□□□□ -1.07
SFXN3-207ENST00000489434 H7BYZ3 331 aa8.34□□□□□ -1.07
SFXN3-207ENST00000489434 SFT2D2O95562 160 aa8.34□□□□□ -1.07
SFXN3-207ENST00000489434 CXCL3P19876 107 aa8.34□□□□□ -1.07
SFXN3-207ENST00000489434 CDKN1BP46527 198 aa8.34□□□□□ -1.07
SFXN3-207ENST00000489434 PPP1R1AQ13522 171 aa8.34□□□□□ -1.07
SFXN3-207ENST00000489434 OR5I1Q13606 314 aa8.34□□□□□ -1.07
SFXN3-207ENST00000489434 CCDC28AQ8IWP9 274 aa8.34□□□□□ -1.07
SFXN3-207ENST00000489434 TMEM263Q8WUH6 116 aaKnown RBP8.34□□□□□ -1.07
SFXN3-207ENST00000489434 RNF141Q8WVD5 230 aa8.34□□□□□ -1.07
SFXN3-207ENST00000489434 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.07
SFXN3-207ENST00000489434 GNPNAT1Q96EK6 184 aaPredicted RBP8.34□□□□□ -1.07
SFXN3-207ENST00000489434 Q9H8V8 135 aa8.34□□□□□ -1.07
SFXN3-207ENST00000489434 NOP10Q9NPE3 64 aaKnown RBP8.34□□□□□ -1.07
SFXN3-207ENST00000489434 M6PRP20645 277 aa8.33□□□□□ -1.08
SFXN3-207ENST00000489434 PLP1P60201 277 aa8.33□□□□□ -1.08
SFXN3-207ENST00000489434 UBE2MP61081 183 aaKnown RBP8.33□□□□□ -1.08
SFXN3-207ENST00000489434 PXDC1Q5TGL8 231 aa8.33□□□□□ -1.08
SFXN3-207ENST00000489434 LCN15Q6UWW0 184 aa8.33□□□□□ -1.08
SFXN3-207ENST00000489434 ZNF503Q96F45 646 aa8.33□□□□□ -1.08
SFXN3-207ENST00000489434 UHRF2Q96PU4 802 aa8.33□□□□□ -1.08
SFXN3-207ENST00000489434 C20orf144Q9BQM9 153 aa8.33□□□□□ -1.08
SFXN3-207ENST00000489434 SLIRPQ9GZT3 109 aaKnown RBP8.33□□□□□ -1.08
SFXN3-207ENST00000489434 ARL6Q9H0F7 186 aa8.33□□□□□ -1.08
SFXN3-207ENST00000489434 PSENENQ9NZ42 101 aa8.33□□□□□ -1.08
SFXN3-207ENST00000489434 MGAT4CQ9UBM8 478 aa8.33□□□□□ -1.08
SFXN3-207ENST00000489434 LRP1BQ9NZR2 4599 aa8.32□□□□□ -1.08
SFXN3-207ENST00000489434 TRAV26-1A0A087WT03 109 aa8.32□□□□□ -1.08
SFXN3-207ENST00000489434 CXCL2P19875 107 aa8.32□□□□□ -1.08
SFXN3-207ENST00000489434 POLR2GP62487 172 aaKnown RBP eCLIP8.32□□□□□ -1.08
SFXN3-207ENST00000489434 ID3Q02535 119 aa8.32□□□□□ -1.08
SFXN3-207ENST00000489434 SPATA12Q7Z6I5 190 aa8.32□□□□□ -1.08
SFXN3-207ENST00000489434 RNASE8Q8TDE3 154 aaKnown RBP8.32□□□□□ -1.08
SFXN3-207ENST00000489434 RXFP4Q8TDU9 374 aa8.32□□□□□ -1.08
SFXN3-207ENST00000489434 TRIM63Q969Q1 353 aa8.32□□□□□ -1.08
SFXN3-207ENST00000489434 SLC50A1Q9BRV3 221 aa8.32□□□□□ -1.08
SFXN3-207ENST00000489434 NPVFQ9HCQ7 196 aa8.32□□□□□ -1.08
SFXN3-207ENST00000489434 PMS2P5A8MQ11 134 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 SNURFLB1AK76 121 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 FNDC10F2Z333 226 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 GOSR2O14653 212 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 SSSCA1O60232 199 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 RLN2P04090 185 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 S100A5P33763 92 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 DLK1P80370 383 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 NDUFA5Q16718 116 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 TEPPQ6URK8 271 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 ZNF546Q86UE3 836 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 CCDC190Q86UF4 302 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 Q8N1X5 172 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 OR10P1Q8NGE3 313 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 S100ZQ8WXG8 99 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 SMIM8Q96KF7 97 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 ARV1Q9H2C2 271 aa8.31□□□□□ -1.08
SFXN3-207ENST00000489434 A0A1W2PPQ1 181 aa8.3□□□□□ -1.08
SFXN3-207ENST00000489434 H3BMQ9 156 aa8.3□□□□□ -1.08
SFXN3-207ENST00000489434 K7EPK0 472 aa8.3□□□□□ -1.08
SFXN3-207ENST00000489434 ATP6V1G1O75348 118 aa8.3□□□□□ -1.08
SFXN3-207ENST00000489434 BTF3P20290 206 aaKnown RBP8.3□□□□□ -1.08
SFXN3-207ENST00000489434 BCAP31P51572 246 aa8.3□□□□□ -1.08
SFXN3-207ENST00000489434 RRAS2P62070 204 aaPredicted RBP8.3□□□□□ -1.08
SFXN3-207ENST00000489434 BPIFA4PQ86YQ2 179 aa8.3□□□□□ -1.08
SFXN3-207ENST00000489434 Q9H3A6 140 aa8.3□□□□□ -1.08
SFXN3-207ENST00000489434 SCRT2Q9NQ03 307 aa8.3□□□□□ -1.08
SFXN3-207ENST00000489434 ZNF331Q9NQX6 463 aaPredicted RBP8.3□□□□□ -1.08
SFXN3-207ENST00000489434 A0A0J9YY99 117 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 GAGE12BA1L429 117 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 H3BNG1 76 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 COX7A2P2O60397 106 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 GAGE7O76087 117 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 METTL15P1P0C7V9 234 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 GAGE12FP0CL80 117 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 GAGE12GP0CL81 117 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 GAGE12IP0CL82 117 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 S100A1P23297 94 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 INPP1P49441 399 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 SLC38A11Q08AI6 406 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 LINC00305Q7Z4B0 112 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 PXMP4Q9Y6I8 212 aa8.29□□□□□ -1.08
SFXN3-207ENST00000489434 C9orf170A2RU37 121 aa8.28□□□□□ -1.08
SFXN3-207ENST00000489434 LEPP41159 167 aa8.28□□□□□ -1.08
SFXN3-207ENST00000489434 TAS2R30P59541 319 aa8.28□□□□□ -1.08
SFXN3-207ENST00000489434 RAB31Q13636 194 aa8.28□□□□□ -1.08
SFXN3-207ENST00000489434 RGS21Q2M5E4 152 aa8.28□□□□□ -1.08
SFXN3-207ENST00000489434 GFI1BQ5VTD9 330 aa8.28□□□□□ -1.08
SFXN3-207ENST00000489434 TMEM14EPQ6UXP3 125 aa8.28□□□□□ -1.08
SFXN3-207ENST00000489434 PATE2Q6UY27 113 aa8.28□□□□□ -1.08
SFXN3-207ENST00000489434 LINC00612Q8N6U2 182 aa8.28□□□□□ -1.08
SFXN3-207ENST00000489434 UPK3BQ9BT76 320 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms