RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.75□□□□□ -0.85
TOP3A-206ENST00000489131 C5orf17Q8NAS9 161 aa9.75□□□□□ -0.85
TOP3A-206ENST00000489131 C2CD4CQ8TF44 421 aa9.75□□□□□ -0.85
TOP3A-206ENST00000489131 HIST1H2BAQ96A08 127 aa9.75□□□□□ -0.85
TOP3A-206ENST00000489131 RAX2Q96IS3 184 aa9.75□□□□□ -0.85
TOP3A-206ENST00000489131 Q9H3A6 140 aa9.75□□□□□ -0.85
TOP3A-206ENST00000489131 HELTA6NFD8 242 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 ZNF207O43670 478 aaKnown RBP9.74□□□□□ -0.85
TOP3A-206ENST00000489131 ATF4P18848 351 aaPredicted RBP9.74□□□□□ -0.85
TOP3A-206ENST00000489131 SYNJ2BPP57105 145 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 RANP62826 216 aaKnown RBP9.74□□□□□ -0.85
TOP3A-206ENST00000489131 SUMO1P63165 101 aaKnown RBP9.74□□□□□ -0.85
TOP3A-206ENST00000489131 DEFB136Q30KP8 78 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 KHDC1LQ5JSQ8 128 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 BLNKQ8WV28 456 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 DPF1Q92782 380 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 SLC50A1Q9BRV3 221 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 RHPN1-AS1Q9BWJ2 59 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 ZNF331Q9NQX6 463 aaPredicted RBP9.74□□□□□ -0.85
TOP3A-206ENST00000489131 CLEC5AQ9NY25 188 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 SIGLEC8Q9NYZ4 499 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 PEMTQ9UBM1 199 aa9.74□□□□□ -0.85
TOP3A-206ENST00000489131 SCO2A0A1W2PP80 73 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 C2orf70A6NJV1 201 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 HAX1O00165 279 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 CCL24O00175 119 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 SLC17A3O00476 420 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 CBLN1P23435 193 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 SLURP1P55000 103 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 SRSF2Q01130 221 aaKnown RBP9.73□□□□□ -0.85
TOP3A-206ENST00000489131 SAMD13Q5VXD3 122 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 SVBPQ8N300 66 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 OR9G4Q8NGQ1 327 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 MRPL53Q96EL3 112 aaKnown RBP9.73□□□□□ -0.85
TOP3A-206ENST00000489131 PARLQ9H300 379 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 EPDR1Q9UM22 224 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 KLF12Q9Y4X4 402 aa9.73□□□□□ -0.85
TOP3A-206ENST00000489131 NIPBLQ6KC79 2804 aaeCLIP9.72□□□□□ -0.85
TOP3A-206ENST00000489131 TRBV6-1A0A0K0K1D8 114 aa9.72□□□□□ -0.85
TOP3A-206ENST00000489131 SERTM2A0A1B0GWG4 89 aa9.72□□□□□ -0.85
TOP3A-206ENST00000489131 PGPA6NDG6 321 aa9.72□□□□□ -0.85
TOP3A-206ENST00000489131 C9JCJ5 164 aa9.72□□□□□ -0.85
TOP3A-206ENST00000489131 SOCS3O14543 225 aa9.72□□□□□ -0.85
TOP3A-206ENST00000489131 PNRC1Q12796 327 aaPredicted RBP9.72□□□□□ -0.85
TOP3A-206ENST00000489131 ADAMTSL5Q6ZMM2 481 aa9.72□□□□□ -0.85
TOP3A-206ENST00000489131 DLX4Q92988 240 aaPredicted RBP9.72□□□□□ -0.85
TOP3A-206ENST00000489131 CITED1Q99966 193 aa9.72□□□□□ -0.85
TOP3A-206ENST00000489131 ATG101Q9BSB4 218 aa9.72□□□□□ -0.85
TOP3A-206ENST00000489131 AAMDCQ9H7C9 122 aa9.72□□□□□ -0.85
TOP3A-206ENST00000489131 PRELID1Q9Y255 219 aa9.72□□□□□ -0.85
TOP3A-206ENST00000489131 LY96Q9Y6Y9 160 aa9.72□□□□□ -0.85
TOP3A-206ENST00000489131 IGHV3-49A0A0A0MS15 119 aa9.71□□□□□ -0.86
TOP3A-206ENST00000489131 IGHV3-66A0A0C4DH42 116 aa9.71□□□□□ -0.86
TOP3A-206ENST00000489131 ZNF785A8K8V0 405 aa9.71□□□□□ -0.86
TOP3A-206ENST00000489131 PEX7O00628 323 aa9.71□□□□□ -0.86
TOP3A-206ENST00000489131 TCRAP04437 139 aa9.71□□□□□ -0.86
TOP3A-206ENST00000489131 S100A9P06702 114 aaKnown RBP9.71□□□□□ -0.86
TOP3A-206ENST00000489131 AWAT1Q58HT5 328 aa9.71□□□□□ -0.86
TOP3A-206ENST00000489131 SMIM7Q9BQ49 75 aa9.71□□□□□ -0.86
TOP3A-206ENST00000489131 NIPSNAP3BQ9BS92 247 aa9.71□□□□□ -0.86
TOP3A-206ENST00000489131 NRN1Q9NPD7 142 aa9.71□□□□□ -0.86
TOP3A-206ENST00000489131 TRBV20OR9-2A0A075B6H5 130 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 IGHV3OR16-13A0A075B7E8 117 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 IGHV3-74A0A0B4J1X5 117 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 TRAV2A0A0B4J234 112 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 TRAV8-2A0A0B4J237 113 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 FBLL1A6NHQ2 334 aaKnown RBP9.7□□□□□ -0.86
TOP3A-206ENST00000489131 ZNF727A8MUV8 499 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 H3BTX0 84 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 SNAPINO95295 136 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 APOC3P02656 99 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 SLC25A5P05141 298 aaKnown RBP9.7□□□□□ -0.86
TOP3A-206ENST00000489131 CSN3P07498 182 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 FOLR2P14207 255 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 TAS2R60P59551 318 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 GUCA2BQ16661 112 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 TMEM183BQ1AE95 376 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 EXOC3-AS1Q8N2X6 119 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 C11orf44Q8N8P7 122 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 SMIM12Q96EX1 92 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 SDF2L1Q9HCN8 221 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 MLXQ9UH92 298 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 NAT8Q9UHE5 227 aa9.7□□□□□ -0.86
TOP3A-206ENST00000489131 M0QZ24 198 aa9.69□□□□□ -0.86
TOP3A-206ENST00000489131 ISLRO14498 428 aa9.69□□□□□ -0.86
TOP3A-206ENST00000489131 SNRPCP09234 159 aaKnown RBP9.69□□□□□ -0.86
TOP3A-206ENST00000489131 EDN2P20800 178 aa9.69□□□□□ -0.86
TOP3A-206ENST00000489131 RPL35P42766 123 aaKnown RBP9.69□□□□□ -0.86
TOP3A-206ENST00000489131 TMEM241Q24JQ0 296 aa9.69□□□□□ -0.86
TOP3A-206ENST00000489131 KRTAP24-1Q3LI83 254 aa9.69□□□□□ -0.86
TOP3A-206ENST00000489131 TCF24Q7RTU0 167 aa9.69□□□□□ -0.86
TOP3A-206ENST00000489131 DCANP1Q8TF63 244 aa9.69□□□□□ -0.86
TOP3A-206ENST00000489131 TVP23CQ96ET8 276 aa9.69□□□□□ -0.86
TOP3A-206ENST00000489131 IGF2BP2-AS1Q96M15 143 aa9.69□□□□□ -0.86
TOP3A-206ENST00000489131 RBAKDNA6NC62 111 aa9.68□□□□□ -0.86
TOP3A-206ENST00000489131 B4DEV8 164 aa9.68□□□□□ -0.86
TOP3A-206ENST00000489131 DIRC3C9JPN6 131 aa9.68□□□□□ -0.86
TOP3A-206ENST00000489131 IGLV2-11P01706 119 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms