RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PRR20BP86481 221 aa17.92■□□□□ 0.46
HMGN1-217ENST00000489072 PRR20AP86496 221 aa17.92■□□□□ 0.46
HMGN1-217ENST00000489072 LGALS9CQ6DKI2 356 aa17.92■□□□□ 0.46
HMGN1-217ENST00000489072 OR11H7Q8NGC8 314 aa17.92■□□□□ 0.46
HMGN1-217ENST00000489072 APLNQ9ULZ1 77 aa17.92■□□□□ 0.46
HMGN1-217ENST00000489072 UBE2L5PA0A1B0GUS4 154 aa17.91■□□□□ 0.46
HMGN1-217ENST00000489072 INMT-MINDY4F8WBC2 141 aa17.91■□□□□ 0.46
HMGN1-217ENST00000489072 PRB4P10163 310 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-217ENST00000489072 S100A11P31949 105 aa17.91■□□□□ 0.46
HMGN1-217ENST00000489072 RAB31Q13636 194 aa17.91■□□□□ 0.46
HMGN1-217ENST00000489072 OPCMLQ14982 345 aa17.91■□□□□ 0.46
HMGN1-217ENST00000489072 PSG3Q16557 428 aa17.91■□□□□ 0.46
HMGN1-217ENST00000489072 C10orf113Q5VZT2 155 aa17.91■□□□□ 0.46
HMGN1-217ENST00000489072 STX12Q86Y82 276 aa17.91■□□□□ 0.46
HMGN1-217ENST00000489072 RNF24Q9Y225 148 aa17.91■□□□□ 0.46
HMGN1-217ENST00000489072 GOLT1BQ9Y3E0 138 aa17.91■□□□□ 0.46
HMGN1-217ENST00000489072 RFNGQ9Y644 331 aa17.91■□□□□ 0.46
HMGN1-217ENST00000489072 M0R2Z0 102 aa17.9■□□□□ 0.46
HMGN1-217ENST00000489072 PRAF2O60831 178 aa17.9■□□□□ 0.46
HMGN1-217ENST00000489072 EMP1P54849 157 aa17.9■□□□□ 0.46
HMGN1-217ENST00000489072 LRRC20Q8TCA0 184 aa17.9■□□□□ 0.46
HMGN1-217ENST00000489072 IGF2BP2-AS1Q96M15 143 aa17.9■□□□□ 0.46
HMGN1-217ENST00000489072 BIRC6Q9NR09 4857 aa17.9■□□□□ 0.46
HMGN1-217ENST00000489072 CRXO43186 299 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-217ENST00000489072 TCTAP57738 103 aa17.89■□□□□ 0.45
HMGN1-217ENST00000489072 HBG1P69891 147 aa17.89■□□□□ 0.45
HMGN1-217ENST00000489072 HBG2P69892 147 aa17.89■□□□□ 0.45
HMGN1-217ENST00000489072 BAXQ07812 192 aa17.89■□□□□ 0.45
HMGN1-217ENST00000489072 SPINK13Q1W4C9 94 aa17.89■□□□□ 0.45
HMGN1-217ENST00000489072 BPIFA4PQ86YQ2 179 aa17.89■□□□□ 0.45
HMGN1-217ENST00000489072 RPP25LQ8N5L8 163 aaKnown RBP17.89■□□□□ 0.45
HMGN1-217ENST00000489072 MARVELD1Q9BSK0 173 aa17.89■□□□□ 0.45
HMGN1-217ENST00000489072 DNAJC4Q9NNZ3 241 aa17.89■□□□□ 0.45
HMGN1-217ENST00000489072 TMEM189A5PLL7 270 aa17.88■□□□□ 0.45
HMGN1-217ENST00000489072 CXCL2P19875 107 aa17.88■□□□□ 0.45
HMGN1-217ENST00000489072 HIST1H1AQ02539 215 aaPredicted RBP17.88■□□□□ 0.45
HMGN1-217ENST00000489072 LCN15Q6UWW0 184 aa17.88■□□□□ 0.45
HMGN1-217ENST00000489072 Q6ZRG5 221 aa17.88■□□□□ 0.45
HMGN1-217ENST00000489072 OR8A1Q8NGG7 326 aa17.88■□□□□ 0.45
HMGN1-217ENST00000489072 NMES1Q9C002 83 aa17.88■□□□□ 0.45
HMGN1-217ENST00000489072 ZNF331Q9NQX6 463 aaPredicted RBP17.88■□□□□ 0.45
HMGN1-217ENST00000489072 TRAV5A0A0B4J249 113 aa17.87■□□□□ 0.45
HMGN1-217ENST00000489072 H3BTX0 84 aa17.87■□□□□ 0.45
HMGN1-217ENST00000489072 SLC17A3O00476 420 aa17.87■□□□□ 0.45
HMGN1-217ENST00000489072 RPL29P47914 159 aaKnown RBP17.87■□□□□ 0.45
HMGN1-217ENST00000489072 NHLH2Q02577 135 aa17.87■□□□□ 0.45
HMGN1-217ENST00000489072 ATP6V1FQ16864 119 aa17.87■□□□□ 0.45
HMGN1-217ENST00000489072 CHAC2Q8WUX2 184 aa17.87■□□□□ 0.45
HMGN1-217ENST00000489072 BATF3Q9NR55 127 aa17.87■□□□□ 0.45
HMGN1-217ENST00000489072 SLC39A9Q9NUM3 307 aa17.87■□□□□ 0.45
HMGN1-217ENST00000489072 OR5AC2Q9NZP5 309 aa17.87■□□□□ 0.45
HMGN1-217ENST00000489072 DEFB131BA0A096LNP1 70 aa17.86■□□□□ 0.45
HMGN1-217ENST00000489072 H0YIZ8 118 aa17.86■□□□□ 0.45
HMGN1-217ENST00000489072 HBE1P02100 147 aa17.86■□□□□ 0.45
HMGN1-217ENST00000489072 AMBPP02760 352 aa17.86■□□□□ 0.45
HMGN1-217ENST00000489072 SPART-AS1P0CW21 52 aa17.86■□□□□ 0.45
HMGN1-217ENST00000489072 IGLC2P0DOY2 106 aa17.86■□□□□ 0.45
HMGN1-217ENST00000489072 FGF7P21781 194 aa17.86■□□□□ 0.45
HMGN1-217ENST00000489072 B2MP61769 119 aa17.86■□□□□ 0.45
HMGN1-217ENST00000489072 BAP18Q8IXM2 172 aa17.86■□□□□ 0.45
HMGN1-217ENST00000489072 RPUSD4Q96CM3 377 aaKnown RBP17.86■□□□□ 0.45
HMGN1-217ENST00000489072 DNAH6Q9C0G6 4158 aa17.86■□□□□ 0.45
HMGN1-217ENST00000489072 IGHV4-4A0A075B6R2 117 aa17.85■□□□□ 0.45
HMGN1-217ENST00000489072 LOC102723971A0A1B0GUV8 181 aa17.85■□□□□ 0.45
HMGN1-217ENST00000489072 H3BQ15 152 aa17.85■□□□□ 0.45
HMGN1-217ENST00000489072 BOLA2-SMG1P6H3BVE0 249 aa17.85■□□□□ 0.45
HMGN1-217ENST00000489072 H2BFSP57053 126 aa17.85■□□□□ 0.45
HMGN1-217ENST00000489072 LRRC37A5PQ49AS3 106 aa17.85■□□□□ 0.45
HMGN1-217ENST00000489072 OR1L4Q8NGR5 311 aa17.85■□□□□ 0.45
HMGN1-217ENST00000489072 SLC50A1Q9BRV3 221 aa17.85■□□□□ 0.45
HMGN1-217ENST00000489072 DKK2Q9UBU2 259 aa17.85■□□□□ 0.45
HMGN1-217ENST00000489072 PXMP4Q9Y6I8 212 aa17.85■□□□□ 0.45
HMGN1-217ENST00000489072 FRAS1Q86XX4 4008 aa17.84■□□□□ 0.45
HMGN1-217ENST00000489072 E5RGE8 158 aa17.84■□□□□ 0.45
HMGN1-217ENST00000489072 INSP01308 110 aa17.84■□□□□ 0.45
HMGN1-217ENST00000489072 DEFA1P59665 94 aa17.84■□□□□ 0.45
HMGN1-217ENST00000489072 DEFA3P59666 94 aa17.84■□□□□ 0.45
HMGN1-217ENST00000489072 RRN3P1Q2M238 152 aa17.84■□□□□ 0.45
HMGN1-217ENST00000489072 FAM222AQ5U5X8 452 aa17.84■□□□□ 0.45
HMGN1-217ENST00000489072 PFDN5Q99471 154 aa17.84■□□□□ 0.45
HMGN1-217ENST00000489072 TMEM208Q9BTX3 173 aa17.84■□□□□ 0.45
HMGN1-217ENST00000489072 RNF126Q9BV68 326 aa17.84■□□□□ 0.45
HMGN1-217ENST00000489072 TRAV12-2A0A075B6T6 113 aa17.83■□□□□ 0.44
HMGN1-217ENST00000489072 RLN2P04090 185 aa17.83■□□□□ 0.44
HMGN1-217ENST00000489072 PRM2P04554 102 aa17.83■□□□□ 0.44
HMGN1-217ENST00000489072 RHOBP62745 196 aa17.83■□□□□ 0.44
HMGN1-217ENST00000489072 OR5C1Q8NGR4 320 aa17.83■□□□□ 0.44
HMGN1-217ENST00000489072 SAT2Q96F10 170 aaPredicted RBP17.83■□□□□ 0.44
HMGN1-217ENST00000489072 PLA2G2EQ9NZK7 142 aa17.83■□□□□ 0.44
HMGN1-217ENST00000489072 CYCSP99999 105 aaKnown RBP17.82■□□□□ 0.44
HMGN1-217ENST00000489072 NPCDR1Q9BY65 106 aa17.82■□□□□ 0.44
HMGN1-217ENST00000489072 YTHDF2Q9Y5A9 579 aaKnown RBP17.82■□□□□ 0.44
HMGN1-217ENST00000489072 ZNF705GA8MUZ8 300 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-217ENST00000489072 PRAC2D3DTV9 90 aa17.81■□□□□ 0.44
HMGN1-217ENST00000489072 MPDU1O75352 247 aa17.81■□□□□ 0.44
HMGN1-217ENST00000489072 THAP6Q8TBB0 222 aa17.81■□□□□ 0.44
HMGN1-217ENST00000489072 SLC25A31Q9H0C2 315 aa17.81■□□□□ 0.44
HMGN1-217ENST00000489072 DNAH10Q8IVF4 4471 aa17.81■□□□□ 0.44
HMGN1-217ENST00000489072 GCSAMLQ5JQS6 135 aa17.8■□□□□ 0.44
HMGN1-217ENST00000489072 PPP1R1CQ8WVI7 109 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms