RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 HIST1H1AQ02539 215 aaPredicted RBP16.04■□□□□ 0.16
PTPN4-211ENST00000488279 PSG3Q16557 428 aa16.04■□□□□ 0.16
PTPN4-211ENST00000488279 UBE2DNLQ8IWF7 75 aa16.04■□□□□ 0.16
PTPN4-211ENST00000488279 OR8A1Q8NGG7 326 aa16.04■□□□□ 0.16
PTPN4-211ENST00000488279 M0R2N4 97 aa16.03■□□□□ 0.16
PTPN4-211ENST00000488279 LYRM1O43325 122 aa16.03■□□□□ 0.16
PTPN4-211ENST00000488279 PRM2P04554 102 aa16.03■□□□□ 0.16
PTPN4-211ENST00000488279 LINC00305Q7Z4B0 112 aa16.03■□□□□ 0.16
PTPN4-211ENST00000488279 BAP18Q8IXM2 172 aa16.03■□□□□ 0.16
PTPN4-211ENST00000488279 TRAV12-2A0A075B6T6 113 aa16.02■□□□□ 0.16
PTPN4-211ENST00000488279 FAM25EA8MYX2 175 aa16.02■□□□□ 0.16
PTPN4-211ENST00000488279 TSPOP30536 169 aa16.02■□□□□ 0.16
PTPN4-211ENST00000488279 NDUFA13Q9P0J0 144 aa16.02■□□□□ 0.16
PTPN4-211ENST00000488279 DNAH2Q9P225 4427 aa16.01■□□□□ 0.15
PTPN4-211ENST00000488279 TRAV6A0A075B6T7 132 aa16.01■□□□□ 0.15
PTPN4-211ENST00000488279 LYRM9A8MSI8 78 aa16.01■□□□□ 0.15
PTPN4-211ENST00000488279 CCSO14618 274 aa16.01■□□□□ 0.15
PTPN4-211ENST00000488279 MRPS12O15235 138 aaKnown RBP16.01■□□□□ 0.15
PTPN4-211ENST00000488279 TCRBP04435 133 aa16.01■□□□□ 0.15
PTPN4-211ENST00000488279 CXCL2P19875 107 aa16.01■□□□□ 0.15
PTPN4-211ENST00000488279 BCAP31P51572 246 aa16.01■□□□□ 0.15
PTPN4-211ENST00000488279 RPUSD4Q96CM3 377 aaKnown RBP16.01■□□□□ 0.15
PTPN4-211ENST00000488279 LINC01587Q99440 93 aa16.01■□□□□ 0.15
PTPN4-211ENST00000488279 C5orf51A6NDU8 294 aa16■□□□□ 0.15
PTPN4-211ENST00000488279 COX7A2P2O60397 106 aa16■□□□□ 0.15
PTPN4-211ENST00000488279 RAB31Q13636 194 aa16■□□□□ 0.15
PTPN4-211ENST00000488279 LGALS9BQ3B8N2 356 aa16■□□□□ 0.15
PTPN4-211ENST00000488279 TMEM88Q6PEY1 159 aa16■□□□□ 0.15
PTPN4-211ENST00000488279 LCN15Q6UWW0 184 aa16■□□□□ 0.15
PTPN4-211ENST00000488279 BPIFA4PQ86YQ2 179 aa16■□□□□ 0.15
PTPN4-211ENST00000488279 TMEM256Q8N2U0 113 aa16■□□□□ 0.15
PTPN4-211ENST00000488279 MGST2Q99735 147 aa16■□□□□ 0.15
PTPN4-211ENST00000488279 LSM5Q9Y4Y9 91 aaKnown RBP16■□□□□ 0.15
PTPN4-211ENST00000488279 RNF212Q495C1 297 aa15.99■□□□□ 0.15
PTPN4-211ENST00000488279 ZNF431Q8TF32 576 aaPredicted RBP15.99■□□□□ 0.15
PTPN4-211ENST00000488279 TMEM37Q8WXS4 190 aa15.99■□□□□ 0.15
PTPN4-211ENST00000488279 SLC50A1Q9BRV3 221 aa15.99■□□□□ 0.15
PTPN4-211ENST00000488279 ZNF331Q9NQX6 463 aaPredicted RBP15.99■□□□□ 0.15
PTPN4-211ENST00000488279 HERC2O95714 4834 aa15.98■□□□□ 0.15
PTPN4-211ENST00000488279 DEFB130BP0DP73 79 aa15.98■□□□□ 0.15
PTPN4-211ENST00000488279 DEFB130AP0DP74 79 aa15.98■□□□□ 0.15
PTPN4-211ENST00000488279 AZU1P20160 251 aa15.98■□□□□ 0.15
PTPN4-211ENST00000488279 CAV2P51636 162 aa15.98■□□□□ 0.15
PTPN4-211ENST00000488279 C10orf113Q5VZT2 155 aa15.98■□□□□ 0.15
PTPN4-211ENST00000488279 Q6ZRG5 221 aa15.98■□□□□ 0.15
PTPN4-211ENST00000488279 DNAJC4Q9NNZ3 241 aa15.98■□□□□ 0.15
PTPN4-211ENST00000488279 NUDT15Q9NV35 164 aa15.98■□□□□ 0.15
PTPN4-211ENST00000488279 FAT2Q9NYQ8 4349 aa15.98■□□□□ 0.15
PTPN4-211ENST00000488279 SNRPCP09234 159 aaKnown RBP15.97■□□□□ 0.15
PTPN4-211ENST00000488279 HTN1P15515 57 aa15.97■□□□□ 0.15
PTPN4-211ENST00000488279 CDKN1BP46527 198 aa15.97■□□□□ 0.15
PTPN4-211ENST00000488279 CAMLGP49069 296 aa15.97■□□□□ 0.15
PTPN4-211ENST00000488279 TAS2R60P59551 318 aa15.97■□□□□ 0.15
PTPN4-211ENST00000488279 C2orf50Q96LR7 162 aa15.97■□□□□ 0.15
PTPN4-211ENST00000488279 SEC22CQ9BRL7 303 aa15.97■□□□□ 0.15
PTPN4-211ENST00000488279 IGLV2-18A0A075B6J9 118 aa15.96■□□□□ 0.15
PTPN4-211ENST00000488279 CST7O76096 145 aa15.96■□□□□ 0.15
PTPN4-211ENST00000488279 PRB4P10163 310 aaPredicted RBP15.96■□□□□ 0.15
PTPN4-211ENST00000488279 PVALBP20472 110 aaPredicted RBP15.96■□□□□ 0.15
PTPN4-211ENST00000488279 NRARPQ7Z6K4 114 aa15.96■□□□□ 0.15
PTPN4-211ENST00000488279 C12orf45Q8N5I9 185 aaPredicted RBP15.96■□□□□ 0.15
PTPN4-211ENST00000488279 C15orf53Q8NAA6 179 aa15.96■□□□□ 0.15
PTPN4-211ENST00000488279 DNAH17Q9UFH2 4485 aa15.96■□□□□ 0.14
PTPN4-211ENST00000488279 PLAC8L1A1L4L8 177 aa15.95■□□□□ 0.14
PTPN4-211ENST00000488279 FAM24AA6NFZ4 105 aa15.95■□□□□ 0.14
PTPN4-211ENST00000488279 PRSS29PA6NIE9 313 aa15.95■□□□□ 0.14
PTPN4-211ENST00000488279 RTL8CO15255 209 aa15.95■□□□□ 0.14
PTPN4-211ENST00000488279 OPCMLQ14982 345 aa15.95■□□□□ 0.14
PTPN4-211ENST00000488279 FCN2Q15485 313 aa15.95■□□□□ 0.14
PTPN4-211ENST00000488279 UQCC1Q9NVA1 299 aa15.95■□□□□ 0.14
PTPN4-211ENST00000488279 PXMP4Q9Y6I8 212 aa15.95■□□□□ 0.14
PTPN4-211ENST00000488279 H2AFB2P0C5Z0 115 aa15.94■□□□□ 0.14
PTPN4-211ENST00000488279 MORN5Q5VZ52 161 aa15.94■□□□□ 0.14
PTPN4-211ENST00000488279 OR10J6PQ8NGY7 276 aa15.94■□□□□ 0.14
PTPN4-211ENST00000488279 C16orf74Q96GX8 76 aa15.94■□□□□ 0.14
PTPN4-211ENST00000488279 CCDC32Q9BV29 185 aa15.94■□□□□ 0.14
PTPN4-211ENST00000488279 C11orf1Q9H5F2 150 aa15.94■□□□□ 0.14
PTPN4-211ENST00000488279 A0A1B0GVY2 172 aa15.93■□□□□ 0.14
PTPN4-211ENST00000488279 H3BTX0 84 aa15.93■□□□□ 0.14
PTPN4-211ENST00000488279 IGLC2P0DOY2 106 aa15.93■□□□□ 0.14
PTPN4-211ENST00000488279 S100A11P31949 105 aa15.93■□□□□ 0.14
PTPN4-211ENST00000488279 MIC13Q5XKP0 118 aa15.93■□□□□ 0.14
PTPN4-211ENST00000488279 OR1L4Q8NGR5 311 aa15.93■□□□□ 0.14
PTPN4-211ENST00000488279 WDR83OSQ9Y284 106 aa15.93■□□□□ 0.14
PTPN4-211ENST00000488279 TIMM8BQ9Y5J9 83 aaPredicted RBP15.93■□□□□ 0.14
PTPN4-211ENST00000488279 FAM240BA0A1B0GVZ2 78 aa15.92■□□□□ 0.14
PTPN4-211ENST00000488279 CBY3A6NI87 242 aa15.92■□□□□ 0.14
PTPN4-211ENST00000488279 F5H768 121 aa15.92■□□□□ 0.14
PTPN4-211ENST00000488279 H7BYZ3 331 aa15.92■□□□□ 0.14
PTPN4-211ENST00000488279 SULT1A1P50225 295 aa15.92■□□□□ 0.14
PTPN4-211ENST00000488279 S100A10P60903 97 aa15.92■□□□□ 0.14
PTPN4-211ENST00000488279 GUK1Q16774 197 aa15.92■□□□□ 0.14
PTPN4-211ENST00000488279 ZNF493Q6ZR52 646 aa15.92■□□□□ 0.14
PTPN4-211ENST00000488279 Q6ZR54 194 aa15.92■□□□□ 0.14
PTPN4-211ENST00000488279 PFDN5Q99471 154 aa15.92■□□□□ 0.14
PTPN4-211ENST00000488279 C20orf144Q9BQM9 153 aa15.92■□□□□ 0.14
PTPN4-211ENST00000488279 H3BQ15 152 aa15.91■□□□□ 0.14
PTPN4-211ENST00000488279 SLC17A3O00476 420 aa15.91■□□□□ 0.14
PTPN4-211ENST00000488279 ATP5G1P05496 136 aa15.91■□□□□ 0.14
PTPN4-211ENST00000488279 ATP5G3P48201 142 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms