RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 H3BMM0 161 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 ISLRO14498 428 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 NDUFB4O95168 129 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 OR10J4P0C629 311 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 ID1P41134 155 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 ZNF266Q14584 549 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 DEFB135Q30KP9 77 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 SSX7Q7RTT5 188 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 STHQ8IWL8 128 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 TCTE3Q8IZS6 198 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 BLNKQ8WV28 456 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 RCHY1Q96PM5 261 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 TIMM9Q9Y5J7 89 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 NBEAL2Q6ZNJ1 2754 aa12.57□□□□□ -0.4
SHROOM1-205ENST00000488072 LGALSLQ3ZCW2 172 aaPredicted RBP12.56□□□□□ -0.4
SHROOM1-205ENST00000488072 LRRC20Q8TCA0 184 aa12.56□□□□□ -0.4
SHROOM1-205ENST00000488072 SAV1Q9H4B6 383 aaPredicted RBP12.56□□□□□ -0.4
SHROOM1-205ENST00000488072 CLEC5AQ9NY25 188 aa12.56□□□□□ -0.4
SHROOM1-205ENST00000488072 S100A7P31151 101 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 MEOX2P50222 304 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 TMUB2Q71RG4 321 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 AKAP14Q86UN6 197 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 EXOC3-AS1Q8N2X6 119 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 RPP25LQ8N5L8 163 aaKnown RBP12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 OR10G4Q8NGN3 311 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 OR10G9Q8NGN4 311 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 OR10G7Q8NGN6 311 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 FXYD5Q96DB9 178 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 OVOL2Q9BRP0 275 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 CSTL1Q9H114 145 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 HRH4Q9H3N8 390 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 ZNF331Q9NQX6 463 aaPredicted RBP12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 KCNIP2Q9NS61 270 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 U3KQK5 164 aa12.55□□□□□ -0.4
SHROOM1-205ENST00000488072 TRBV19A0A075B6N1 114 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 A0A0J9YX75 114 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 M0R3E3 92 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 CA1P00915 261 aaPredicted RBP12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 NHLRC4P0CG21 123 aaPredicted RBP12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 HLA-DRB4P13762 266 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 M6PRP20645 277 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 PSG3Q16557 428 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 ACOT6Q3I5F7 207 aaPredicted RBP12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 S100A7AQ86SG5 101 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 ZNF738Q8NE65 137 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 OR4B1Q8NGF8 309 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 OR2G3Q8NGZ4 309 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 ARPC5LQ9BPX5 153 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 SPATA25Q9BR10 227 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 PSMG3Q9BT73 122 aaPredicted RBP12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 PAXXQ9BUH6 204 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 MRPL32Q9BYC8 188 aaKnown RBP12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 SLC35B3Q9H1N7 401 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 OR51M1Q9H341 326 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 RPRMQ9NS64 109 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 TMEM14CQ9P0S9 112 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 HLA-DRB4X5D2U9 266 aa12.54□□□□□ -0.4
SHROOM1-205ENST00000488072 BORCS7-ASMTA0A0B4J1R7 106 aa12.53□□□□□ -0.4
SHROOM1-205ENST00000488072 HIST1H1EP10412 219 aaKnown RBP12.53□□□□□ -0.4
SHROOM1-205ENST00000488072 ZNF726P1Q15940 193 aa12.53□□□□□ -0.4
SHROOM1-205ENST00000488072 LCN15Q6UWW0 184 aa12.53□□□□□ -0.4
SHROOM1-205ENST00000488072 FOXI2Q6ZQN5 318 aa12.53□□□□□ -0.4
SHROOM1-205ENST00000488072 RNF141Q8WVD5 230 aa12.53□□□□□ -0.4
SHROOM1-205ENST00000488072 PHYHIPLQ96FC7 376 aa12.53□□□□□ -0.4
SHROOM1-205ENST00000488072 BCL2L11O43521 198 aa12.52□□□□□ -0.41
SHROOM1-205ENST00000488072 OR7C2O60412 319 aa12.52□□□□□ -0.41
SHROOM1-205ENST00000488072 APOC4P55056 127 aa12.52□□□□□ -0.41
SHROOM1-205ENST00000488072 RHOBP62745 196 aa12.52□□□□□ -0.41
SHROOM1-205ENST00000488072 ZNF345Q14585 488 aa12.52□□□□□ -0.41
SHROOM1-205ENST00000488072 RPUSD4Q96CM3 377 aaKnown RBP12.52□□□□□ -0.41
SHROOM1-205ENST00000488072 ZNF471Q9BX82 626 aaPredicted RBP12.52□□□□□ -0.41
SHROOM1-205ENST00000488072 ZMAT4Q9H898 229 aa12.52□□□□□ -0.41
SHROOM1-205ENST00000488072 KIR2DL5BA0A0G2JN68 375 aa12.51□□□□□ -0.41
SHROOM1-205ENST00000488072 KIR2DL5BA0A0G2JPC4 375 aa12.51□□□□□ -0.41
SHROOM1-205ENST00000488072 TAAR5O14804 337 aa12.51□□□□□ -0.41
SHROOM1-205ENST00000488072 C1QBP02746 253 aa12.51□□□□□ -0.41
SHROOM1-205ENST00000488072 NBEAP1P0C6P0 100 aa12.51□□□□□ -0.41
SHROOM1-205ENST00000488072 CNN1P51911 297 aaKnown RBP12.51□□□□□ -0.41
SHROOM1-205ENST00000488072 NKX2-5P52952 324 aaPredicted RBP12.51□□□□□ -0.41
SHROOM1-205ENST00000488072 KIR2DL5AQ8N109 375 aa12.51□□□□□ -0.41
SHROOM1-205ENST00000488072 KIR2DL5BQ8NHK3 375 aa12.51□□□□□ -0.41
SHROOM1-205ENST00000488072 RAB24Q969Q5 203 aa12.51□□□□□ -0.41
SHROOM1-205ENST00000488072 XCL2Q9UBD3 114 aa12.51□□□□□ -0.41
SHROOM1-205ENST00000488072 A0A0D9SG52 128 aa12.5□□□□□ -0.41
SHROOM1-205ENST00000488072 SPRY2O43597 315 aa12.5□□□□□ -0.41
SHROOM1-205ENST00000488072 JTBO76095 146 aa12.5□□□□□ -0.41
SHROOM1-205ENST00000488072 SPP1P10451 314 aa12.5□□□□□ -0.41
SHROOM1-205ENST00000488072 FHITP49789 147 aa12.5□□□□□ -0.41
SHROOM1-205ENST00000488072 UBE2L3P68036 154 aaKnown RBP12.5□□□□□ -0.41
SHROOM1-205ENST00000488072 HIST1H1AQ02539 215 aaPredicted RBP12.5□□□□□ -0.41
SHROOM1-205ENST00000488072 TMEM41BQ5BJD5 291 aa12.5□□□□□ -0.41
SHROOM1-205ENST00000488072 EBLN2Q6P2I7 272 aa12.5□□□□□ -0.41
SHROOM1-205ENST00000488072 AMTNQ6UX39 209 aa12.5□□□□□ -0.41
SHROOM1-205ENST00000488072 RNF183Q96D59 192 aa12.5□□□□□ -0.41
SHROOM1-205ENST00000488072 A0A1W2PPV4 95 aa12.49□□□□□ -0.41
SHROOM1-205ENST00000488072 ARL14EPLP0DKL9 152 aa12.49□□□□□ -0.41
SHROOM1-205ENST00000488072 CDC34P49427 236 aaPredicted RBP12.49□□□□□ -0.41
SHROOM1-205ENST00000488072 ICAM4Q14773 271 aa12.49□□□□□ -0.41
SHROOM1-205ENST00000488072 KIR3DS1Q14943 382 aa12.49□□□□□ -0.41
SHROOM1-205ENST00000488072 OR8A1Q8NGG7 326 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms