RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 LINC00477Q96M19 166 aa2.31□□□□□ -2.04
GPNMB-212ENST00000487890 GINS3Q9BRX5 216 aa2.31□□□□□ -2.04
GPNMB-212ENST00000487890 ZNF286AQ9HBT8 521 aa2.31□□□□□ -2.04
GPNMB-212ENST00000487890 JPT1Q9UK76 154 aa2.31□□□□□ -2.04
GPNMB-212ENST00000487890 HSPE1-MOB4S4R3N1 261 aa2.31□□□□□ -2.04
GPNMB-212ENST00000487890 IRGMA1A4Y4 181 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 FAM25AB3EWG3 89 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 FAM25CB3EWG5 89 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 FAM25GB3EWG6 89 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 MCRIP1C9JLW8 97 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 BUB1B-PAK6H3BSN5 160 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 J3QRE1 110 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 AIPO00170 330 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 SDCBPO00560 298 aaPredicted RBP2.3□□□□□ -2.04
GPNMB-212ENST00000487890 MFNGO00587 321 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 GEMIN2O14893 280 aaKnown RBP2.3□□□□□ -2.04
GPNMB-212ENST00000487890 MYL12BO14950 172 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 ZNF207O43670 478 aaKnown RBP2.3□□□□□ -2.04
GPNMB-212ENST00000487890 SCO1O75880 301 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 IGKV1D-33P01593 117 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 IGKV1-33P01594 117 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 CSN2P05814 226 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 CD37P11049 281 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 CRISP2P16562 243 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 RAB3BP20337 219 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 IL3RAP26951 378 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 ZNF93P35789 620 aaPredicted RBP2.3□□□□□ -2.04
GPNMB-212ENST00000487890 DYNLT3P51808 116 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 RBM11P57052 281 aaKnown RBP2.3□□□□□ -2.04
GPNMB-212ENST00000487890 DSCR10P59022 87 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 LYZP61626 148 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 RRAS2P62070 204 aaPredicted RBP2.3□□□□□ -2.04
GPNMB-212ENST00000487890 CACNG7P62955 275 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 SLC35A2P78381 396 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 CD164Q04900 197 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 DAZ2Q13117 558 aaKnown RBP2.3□□□□□ -2.04
GPNMB-212ENST00000487890 CDK5R1Q15078 307 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 TMEM97Q5BJF2 176 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 TMEM128Q5BJH2 165 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 DEFB121Q5J5C9 76 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 FAM27D1Q5T7N8 215 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 C1orf195Q5TG92 126 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 RPL22L1Q6P5R6 122 aaKnown RBP2.3□□□□□ -2.04
GPNMB-212ENST00000487890 PLET1Q6UQ28 207 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 C10orf99Q6UWK7 81 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 SLC35E3Q7Z769 313 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 Q8N2B8 174 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 OSR2Q8N2R0 312 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 OR51T1Q8NGJ9 327 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 OR5H6Q8NGV6 325 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 OR8U1Q8NH10 309 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 RGP1Q92546 391 aaPredicted RBP2.3□□□□□ -2.04
GPNMB-212ENST00000487890 VCXQ9H320 206 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 BANF2Q9H503 90 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 EDA2RQ9HAV5 297 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 DAZ3Q9NR90 486 aaKnown RBP2.3□□□□□ -2.04
GPNMB-212ENST00000487890 IDI2-AS1Q9NZ38 188 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 LINC00527Q9UJ94 153 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 TRAPPC2LQ9UL33 140 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 TP53TG1Q9Y2A0 90 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 TENM2Q9NT68 2774 aa2.3□□□□□ -2.04
GPNMB-212ENST00000487890 PLAC8L1A1L4L8 177 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 OR5H14A6NHG9 310 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 OOSP1A8MZH6 123 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 H7C2Y5 167 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 ATG12O94817 140 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 GAS8-AS1O95177 125 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 INSP01308 110 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 IGLV1-47P01700 117 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 HBZP02008 142 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 MAS1P04201 325 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 REG1AP05451 166 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 OR13C7P0DN81 318 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 CD34P28906 385 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 PFN2P35080 140 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 MYCNOSP40205 109 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 TAS2R43P59537 309 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 RHOBP62745 196 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 PRR3P79522 188 aaKnown RBP2.29□□□□□ -2.04
GPNMB-212ENST00000487890 RPL18AQ02543 176 aaKnown RBP2.29□□□□□ -2.04
GPNMB-212ENST00000487890 SMAGPQ0VAQ4 97 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 ST3GAL4Q11206 333 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 DIAPH2-AS1Q14236 149 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 PLGLAQ15195 96 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 TMEM183BQ1AE95 376 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 MPV17LQ2QL34 196 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 DEFB136Q30KP8 78 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 RNF212Q495C1 297 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 Q499Y3 187 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 RNASE10Q5GAN6 216 aaKnown RBP2.29□□□□□ -2.04
GPNMB-212ENST00000487890 RSBN1Q5VWQ0 802 aaPredicted RBP2.29□□□□□ -2.04
GPNMB-212ENST00000487890 XAF1Q6GPH4 301 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 OR10K2Q6IF99 312 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 SFXN4Q6P4A7 337 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 GLIPR1L1Q6UWM5 242 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 GSG1LQ6UXU4 331 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 Q6ZR54 194 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 TCF24Q7RTU0 167 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 LINC00596Q86U02 117 aa2.29□□□□□ -2.04
GPNMB-212ENST00000487890 SNX29P2Q8IUI4 249 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms