RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 OR5H14A6NHG9 310 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 SIGLEC16A6NMB1 481 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 ARPC5O15511 151 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 PIAS1O75925 651 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 ZNF682O95780 498 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 IGHV1-46P01743 117 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 HLA-DQB1P01920 261 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 S100A2P29034 98 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 CRABP2P29373 138 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 RPS10P46783 165 aaKnown RBP2.1□□□□□ -2.07
UBR3-211ENST00000487689 CMC4P56277 68 aaPredicted RBP2.1□□□□□ -2.07
UBR3-211ENST00000487689 TAS2R45P59539 299 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 FGF12P61328 243 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 NCALDP61601 193 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 RBX1P62877 108 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 DCDP81605 110 aaKnown RBP2.1□□□□□ -2.07
UBR3-211ENST00000487689 SAMD13Q5VXD3 122 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 ZFP1Q6P2D0 407 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 SCXQ7RTU7 201 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 C1orf174Q8IYL3 243 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 UMODL1-AS1Q8N2C9 162 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 EIF4E3Q8N5X7 224 aaKnown RBP2.1□□□□□ -2.07
UBR3-211ENST00000487689 ZNF615Q8N8J6 731 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 OR13C8Q8NGS7 320 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 GRPEL2Q8TAA5 225 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 GPR119Q8TDV5 335 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 ACOT12Q8WYK0 555 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 OR5P3Q8WZ94 311 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 DNAJC30Q96LL9 226 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 GPR82Q96P67 336 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 C1QTNF6Q9BXI9 259 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 CHST6Q9GZX3 395 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 ZNF286AQ9HBT8 521 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 FAM60AQ9NP50 221 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 SS18L2Q9UHA2 77 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 ZNF222Q9UK12 451 aa2.1□□□□□ -2.07
UBR3-211ENST00000487689 MRPS16Q9Y3D3 137 aaKnown RBP2.1□□□□□ -2.07
UBR3-211ENST00000487689 MYH11P35749 1972 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 A0A1W2PRE2 83 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 COX7A2LO14548 114 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 RBFOX2O43251 390 aaKnown RBP eCLIP2.09□□□□□ -2.07
UBR3-211ENST00000487689 GADD45GO95257 159 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 IFNA7P01567 189 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 APOA2P02652 100 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 GYPCP04921 128 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 OR5AC1P0C628 307 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 CPMP14384 443 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 G6PCP35575 357 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 PPP1CCP36873 323 aaKnown RBP2.09□□□□□ -2.07
UBR3-211ENST00000487689 DAPP51397 102 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 CCR6P51684 374 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 ZNF140P52738 457 aaPredicted RBP2.09□□□□□ -2.07
UBR3-211ENST00000487689 RPS20P60866 119 aaKnown RBP2.09□□□□□ -2.07
UBR3-211ENST00000487689 ELF3P78545 371 aaPredicted RBP2.09□□□□□ -2.07
UBR3-211ENST00000487689 ENDOGQ14249 297 aaKnown RBP2.09□□□□□ -2.07
UBR3-211ENST00000487689 KLHL12Q53G59 568 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 Q6ZS49 121 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 AMN1Q8IY45 258 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 OSR2Q8N2R0 312 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 ZFP62Q8NB50 900 aaPredicted RBP2.09□□□□□ -2.07
UBR3-211ENST00000487689 OR9Q1Q8NGQ5 310 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 OR4A5Q8NH83 315 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 CIRBP-AS1Q8TBR5 109 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 ZNF675Q8TD23 568 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 SLC7A6Q92536 515 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 PLEKHB2Q96CS7 222 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 SERPINI1Q99574 410 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 NDFIP1Q9BT67 221 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 SHANK2-AS3Q9BTD1 123 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 CCDC32Q9BV29 185 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 TMEM222Q9H0R3 208 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 CXorf21Q9HAI6 301 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 WFDC1Q9HC57 220 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 ZNF355PQ9NSJ1 428 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 LAMTOR3Q9UHA4 124 aa2.09□□□□□ -2.07
UBR3-211ENST00000487689 SSPOA2VEC9 5147 aa2.09□□□□□ -2.08
UBR3-211ENST00000487689 NEBP20929 6669 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 TRBV20OR9-2A0A075B6H5 130 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 TRBV19A0A075B6N1 114 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 A0A0D9SEW6 157 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 TMEM269A0A1B0GVZ9 245 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 C11orf94C9JXX5 98 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 J3QRK9 145 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 ZNF207O43670 478 aaKnown RBP2.08□□□□□ -2.08
UBR3-211ENST00000487689 SOD1P00441 154 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 PDYNP01213 254 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 RPS4Y1P22090 263 aaKnown RBP2.08□□□□□ -2.08
UBR3-211ENST00000487689 TPI1P60174 286 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 SURF2Q15527 256 aaPredicted RBP2.08□□□□□ -2.08
UBR3-211ENST00000487689 SP6Q3SY56 376 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 CCDC153Q494R4 210 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 TNFAIP8L3Q5GJ75 292 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 BRMS1LQ5PSV4 323 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 PRSS54Q6PEW0 395 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 Q6Q795 121 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 CLVS1Q8IUQ0 354 aaPredicted RBP2.08□□□□□ -2.08
UBR3-211ENST00000487689 SAXO1Q8IYX7 474 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 ZNF101Q8IZC7 436 aa2.08□□□□□ -2.08
UBR3-211ENST00000487689 C12orf45Q8N5I9 185 aaPredicted RBP2.08□□□□□ -2.08
UBR3-211ENST00000487689 RPP25LQ8N5L8 163 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms