RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ZNF253O75346 499 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 SNRPCP09234 159 aaKnown RBP5.43□□□□□ -1.54
SF3A3-206ENST00000487062 CD99P14209 185 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 FOSL1P15407 271 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 SRD5A1P18405 259 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 CSN1S1P47710 185 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 MEOX2P50222 304 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 S100A12P80511 92 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 RNF212Q495C1 297 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 FAM106AQ4KMX7 169 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 LINC01551Q86U37 167 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 ARL6IP6Q8N6S5 226 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 ZNF414Q96IQ9 312 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 OR5B12Q96R08 314 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 ATG101Q9BSB4 218 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 CELSR1Q9NYQ6 3014 aa5.43□□□□□ -1.54
SF3A3-206ENST00000487062 ZANQ9Y493 2812 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 TRBV20OR9-2A0A075B6H5 130 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 IGHV3OR16-8A0A075B7F1 116 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 A0A087X0K7 114 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 SERTM2A0A1B0GWG4 89 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 FAM181BA6NEQ2 426 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 H7BYZ3 331 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 K7EMT4 169 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 LY6G6DO95868 133 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 TCRAP04437 139 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 RNASE1P07998 156 aaKnown RBP5.42□□□□□ -1.54
SF3A3-206ENST00000487062 LGALS1P09382 135 aaKnown RBP5.42□□□□□ -1.54
SF3A3-206ENST00000487062 S100PP25815 95 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 BMI1P35226 326 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 TMEM183BQ1AE95 376 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 CENPWQ5EE01 88 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 SIGLEC15Q6ZMC9 328 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 LCNL1Q6ZST4 164 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 Q6ZSV7 163 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 GPHB5Q86YW7 130 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 RNF152Q8N8N0 203 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 OCC1Q8TAD7 63 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 MYOZ3Q8TDC0 251 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 ISOC2Q96AB3 205 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 SMIM12Q96EX1 92 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 FMC1Q96HJ9 113 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 UBE2E2Q96LR5 201 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 SLC50A1Q9BRV3 221 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 BIN3Q9NQY0 253 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 SERTAD4Q9NUC0 356 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 RPH3ALQ9UNE2 315 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 ITPR2Q14571 2701 aa5.42□□□□□ -1.54
SF3A3-206ENST00000487062 VPS13CQ709C8 3753 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 FLNAP21333 2647 aaKnown RBP5.41□□□□□ -1.54
SF3A3-206ENST00000487062 ZNF320A2RRD8 509 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 CLPSL1A2RUU4 121 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 FBLL1A6NHQ2 334 aaKnown RBP5.41□□□□□ -1.54
SF3A3-206ENST00000487062 PRSS47A8MTI9 375 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 J3KRW8 73 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 ZNF207O43670 478 aaKnown RBP5.41□□□□□ -1.54
SF3A3-206ENST00000487062 TRBV12-3P01733 135 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 MGST1P10620 155 aaKnown RBP5.41□□□□□ -1.54
SF3A3-206ENST00000487062 GNG5P63218 68 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 RPEL1Q2QD12 228 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 KCNIP4Q6PIL6 250 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 C16orf54Q6UWD8 224 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 C10orf99Q6UWK7 81 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 BAGE2Q86Y30 109 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 EXOC3-AS1Q8N2X6 119 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 KLHDC1Q8N7A1 406 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 OR10G8Q8NGN5 311 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 SFRP2Q96HF1 295 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 BTF3L4Q96K17 158 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 IGF2BP2-AS1Q96M15 143 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 C17orf77Q96MU5 243 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 CLEC5AQ9NY25 188 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 UFC1Q9Y3C8 167 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 KLF12Q9Y4X4 402 aa5.41□□□□□ -1.54
SF3A3-206ENST00000487062 IGHV7-4-1A0A0J9YVY3 117 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 TRBV6-1A0A0K0K1D8 114 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 PGPEP1LA6NFU8 196 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 COLCA2A8K830 154 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 SLC17A3O00476 420 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 CDX1P47902 265 aaPredicted RBP5.4□□□□□ -1.54
SF3A3-206ENST00000487062 HILS1P60008 231 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 ERVFC1-1P60608 527 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 LINC00518Q8N0U6 118 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 FAM24BQ8N5W8 94 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 TMEM75Q8N9X5 138 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 WFDC12Q8WWY7 111 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 IMMP2LQ96T52 175 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 C16orf95Q9H693 158 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 ESM1Q9NQ30 184 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 ZNF331Q9NQX6 463 aaPredicted RBP5.4□□□□□ -1.54
SF3A3-206ENST00000487062 DAZ1Q9NQZ3 744 aaKnown RBP5.4□□□□□ -1.54
SF3A3-206ENST00000487062 OSTCQ9NRP0 149 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 AURKAIP1Q9NWT8 199 aaPredicted RBP5.4□□□□□ -1.54
SF3A3-206ENST00000487062 MLXQ9UH92 298 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 SMAD5-AS1Q9Y6J3 95 aa5.4□□□□□ -1.54
SF3A3-206ENST00000487062 CCDC168Q8NDH2 2452 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 IGHV3OR16-13A0A075B7E8 117 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 IGHV3-49A0A0A0MS15 119 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 IGHV3-74A0A0B4J1X5 117 aa5.39□□□□□ -1.55
SF3A3-206ENST00000487062 TRAV34A0A0B4J273 112 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms