RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TMEM88Q6PEY1 159 aa17.38■□□□□ 0.37
LIME1-206ENST00000487026 OR8A1Q8NGG7 326 aa17.38■□□□□ 0.37
LIME1-206ENST00000487026 A0A087X0K7 114 aa17.37■□□□□ 0.37
LIME1-206ENST00000487026 K7EPK0 472 aa17.37■□□□□ 0.37
LIME1-206ENST00000487026 GOSR2O14653 212 aa17.37■□□□□ 0.37
LIME1-206ENST00000487026 MRPS12O15235 138 aaKnown RBP17.37■□□□□ 0.37
LIME1-206ENST00000487026 RTL8CO15255 209 aa17.37■□□□□ 0.37
LIME1-206ENST00000487026 PLA2G10O15496 165 aa17.37■□□□□ 0.37
LIME1-206ENST00000487026 AZU1P20160 251 aa17.37■□□□□ 0.37
LIME1-206ENST00000487026 C20orf85Q9H1P6 137 aa17.37■□□□□ 0.37
LIME1-206ENST00000487026 KIAA1109Q2LD37 5005 aa17.37■□□□□ 0.37
LIME1-206ENST00000487026 BOLA2-SMG1P6H3BVE0 249 aa17.36■□□□□ 0.37
LIME1-206ENST00000487026 AGPAT2O15120 278 aa17.36■□□□□ 0.37
LIME1-206ENST00000487026 FCN2Q15485 313 aa17.36■□□□□ 0.37
LIME1-206ENST00000487026 PPP1R14DQ9NXH3 145 aa17.36■□□□□ 0.37
LIME1-206ENST00000487026 A0A1B0GVY2 172 aa17.35■□□□□ 0.37
LIME1-206ENST00000487026 CNPY1Q3B7I2 92 aa17.35■□□□□ 0.37
LIME1-206ENST00000487026 LINC00305Q7Z4B0 112 aa17.35■□□□□ 0.37
LIME1-206ENST00000487026 S100A7AQ86SG5 101 aa17.35■□□□□ 0.37
LIME1-206ENST00000487026 LINC01587Q99440 93 aa17.35■□□□□ 0.37
LIME1-206ENST00000487026 PRSS29PA6NIE9 313 aa17.34■□□□□ 0.37
LIME1-206ENST00000487026 FAM25EA8MYX2 175 aa17.34■□□□□ 0.37
LIME1-206ENST00000487026 DEFB130BP0DP73 79 aa17.34■□□□□ 0.37
LIME1-206ENST00000487026 DEFB130AP0DP74 79 aa17.34■□□□□ 0.37
LIME1-206ENST00000487026 LGALS9BQ3B8N2 356 aa17.34■□□□□ 0.37
LIME1-206ENST00000487026 RPUSD4Q96CM3 377 aaKnown RBP17.34■□□□□ 0.37
LIME1-206ENST00000487026 MGST2Q99735 147 aa17.34■□□□□ 0.37
LIME1-206ENST00000487026 LSM5Q9Y4Y9 91 aaKnown RBP17.34■□□□□ 0.37
LIME1-206ENST00000487026 TRAV6A0A075B6T7 132 aa17.33■□□□□ 0.36
LIME1-206ENST00000487026 LYRM9A8MSI8 78 aa17.33■□□□□ 0.36
LIME1-206ENST00000487026 H3BTX0 84 aa17.33■□□□□ 0.36
LIME1-206ENST00000487026 L7N2F9 121 aa17.33■□□□□ 0.36
LIME1-206ENST00000487026 LYRM1O43325 122 aa17.33■□□□□ 0.36
LIME1-206ENST00000487026 HTN1P15515 57 aa17.33■□□□□ 0.36
LIME1-206ENST00000487026 VAMP2P63027 116 aa17.33■□□□□ 0.36
LIME1-206ENST00000487026 PXDC1Q5TGL8 231 aa17.33■□□□□ 0.36
LIME1-206ENST00000487026 ZNF546Q86UE3 836 aa17.33■□□□□ 0.36
LIME1-206ENST00000487026 GGACTQ9BVM4 153 aa17.33■□□□□ 0.36
LIME1-206ENST00000487026 PKHD1P08F94 4074 aa17.32■□□□□ 0.36
LIME1-206ENST00000487026 PLAC8L1A1L4L8 177 aa17.32■□□□□ 0.36
LIME1-206ENST00000487026 B2MP61769 119 aa17.32■□□□□ 0.36
LIME1-206ENST00000487026 ZNF846Q147U1 533 aa17.32■□□□□ 0.36
LIME1-206ENST00000487026 MORN5Q5VZ52 161 aa17.32■□□□□ 0.36
LIME1-206ENST00000487026 TMEM37Q8WXS4 190 aa17.32■□□□□ 0.36
LIME1-206ENST00000487026 SEC22CQ9BRL7 303 aa17.32■□□□□ 0.36
LIME1-206ENST00000487026 PTTG2Q9NZH5 202 aa17.32■□□□□ 0.36
LIME1-206ENST00000487026 PKD1P98161 4303 aa17.31■□□□□ 0.36
LIME1-206ENST00000487026 COX7A2P2O60397 106 aa17.31■□□□□ 0.36
LIME1-206ENST00000487026 TCRBP04435 133 aa17.31■□□□□ 0.36
LIME1-206ENST00000487026 TSPOP30536 169 aa17.31■□□□□ 0.36
LIME1-206ENST00000487026 BCAP31P51572 246 aa17.31■□□□□ 0.36
LIME1-206ENST00000487026 RNF212Q495C1 297 aa17.31■□□□□ 0.36
LIME1-206ENST00000487026 LINC00299Q6ZSB3 139 aa17.31■□□□□ 0.36
LIME1-206ENST00000487026 ZNF331Q9NQX6 463 aaPredicted RBP17.31■□□□□ 0.36
LIME1-206ENST00000487026 Q6ZR54 194 aa17.3■□□□□ 0.36
LIME1-206ENST00000487026 C5orf51A6NDU8 294 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 FAM24AA6NFZ4 105 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 PRAC2D3DTV9 90 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 SLC17A3O00476 420 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 CST7O76096 145 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 CAV2P51636 162 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 KIR3DS1Q14943 382 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 OPCMLQ14982 345 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 C10orf113Q5VZT2 155 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 LCN15Q6UWW0 184 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 BPIFA4PQ86YQ2 179 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 PARD6GQ9BYG4 376 aaPredicted RBP17.29■□□□□ 0.36
LIME1-206ENST00000487026 RNF24Q9Y225 148 aa17.29■□□□□ 0.36
LIME1-206ENST00000487026 F5H768 121 aa17.28■□□□□ 0.36
LIME1-206ENST00000487026 CAMLGP49069 296 aa17.28■□□□□ 0.36
LIME1-206ENST00000487026 TAS2R60P59551 318 aa17.28■□□□□ 0.36
LIME1-206ENST00000487026 ZNF431Q8TF32 576 aaPredicted RBP17.28■□□□□ 0.36
LIME1-206ENST00000487026 NUDT15Q9NV35 164 aa17.28■□□□□ 0.36
LIME1-206ENST00000487026 TRAV5A0A0B4J249 113 aa17.27■□□□□ 0.36
LIME1-206ENST00000487026 H3BQ15 152 aa17.27■□□□□ 0.36
LIME1-206ENST00000487026 CXCL2P19875 107 aa17.27■□□□□ 0.36
LIME1-206ENST00000487026 CDKN1BP46527 198 aa17.27■□□□□ 0.36
LIME1-206ENST00000487026 MIC13Q5XKP0 118 aa17.27■□□□□ 0.36
LIME1-206ENST00000487026 NRARPQ7Z6K4 114 aa17.27■□□□□ 0.36
LIME1-206ENST00000487026 TMEM256Q8N2U0 113 aa17.27■□□□□ 0.36
LIME1-206ENST00000487026 C12orf45Q8N5I9 185 aaPredicted RBP17.27■□□□□ 0.36
LIME1-206ENST00000487026 SLC50A1Q9BRV3 221 aa17.27■□□□□ 0.36
LIME1-206ENST00000487026 C11orf1Q9H5F2 150 aa17.27■□□□□ 0.36
LIME1-206ENST00000487026 DNAJC4Q9NNZ3 241 aa17.27■□□□□ 0.36
LIME1-206ENST00000487026 NACAE9PAV3 2078 aa17.27■□□□□ 0.35
LIME1-206ENST00000487026 DYNC1H1Q14204 4646 aaKnown RBP17.26■□□□□ 0.35
LIME1-206ENST00000487026 C15orf53Q8NAA6 179 aa17.26■□□□□ 0.35
LIME1-206ENST00000487026 IGLC2P0DOY2 106 aa17.25■□□□□ 0.35
LIME1-206ENST00000487026 C2orf50Q96LR7 162 aa17.25■□□□□ 0.35
LIME1-206ENST00000487026 DNAH11Q96DT5 4516 aa17.25■□□□□ 0.35
LIME1-206ENST00000487026 CBY3A6NI87 242 aa17.24■□□□□ 0.35
LIME1-206ENST00000487026 NUDT3O95989 172 aa17.24■□□□□ 0.35
LIME1-206ENST00000487026 RAB31Q13636 194 aa17.24■□□□□ 0.35
LIME1-206ENST00000487026 Q6ZRG5 221 aa17.24■□□□□ 0.35
LIME1-206ENST00000487026 S100ZQ8WXG8 99 aa17.24■□□□□ 0.35
LIME1-206ENST00000487026 C16orf74Q96GX8 76 aa17.24■□□□□ 0.35
LIME1-206ENST00000487026 ATG101Q9BSB4 218 aa17.24■□□□□ 0.35
LIME1-206ENST00000487026 NOP10Q9NPE3 64 aaKnown RBP17.24■□□□□ 0.35
LIME1-206ENST00000487026 UQCC1Q9NVA1 299 aa17.24■□□□□ 0.35
LIME1-206ENST00000487026 ATP5G1P05496 136 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms