RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 KHDC3LQ587J8 217 aa9.57□□□□□ -0.88
HDAC6-229ENST00000486665 STXBP6Q8NFX7 210 aa9.57□□□□□ -0.88
HDAC6-229ENST00000486665 OR2K2Q8NGT1 345 aa9.57□□□□□ -0.88
HDAC6-229ENST00000486665 TMPRSS5Q9H3S3 457 aa9.57□□□□□ -0.88
HDAC6-229ENST00000486665 RNF24Q9Y225 148 aa9.57□□□□□ -0.88
HDAC6-229ENST00000486665 A0A087X0K7 114 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 A0A1B0GV50 99 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 MAP1LC3B2A6NCE7 125 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 ZNF705EA8MWA4 302 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-229ENST00000486665 K7EIL1 84 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 CD5P06127 495 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 H2AFB1P0C5Y9 115 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 GCHFRP30047 84 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 KRTAP10-11P60412 298 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 CCL20P78556 96 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 GUCA2BQ16661 112 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 IGFL4Q6B9Z1 124 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 FAM24BQ8N5W8 94 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 SFT2D1Q8WV19 159 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 BLNKQ8WV28 456 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 PCNPQ8WW12 178 aaKnown RBP9.56□□□□□ -0.88
HDAC6-229ENST00000486665 MAP1LC3BQ9GZQ8 125 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 NRN1Q9NPD7 142 aa9.56□□□□□ -0.88
HDAC6-229ENST00000486665 ZNF256Q9Y2P7 627 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-229ENST00000486665 TRBV19A0A075B6N1 114 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 K7EQG2 157 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 DNASE2O00115 360 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-229ENST00000486665 SOCS3O14543 225 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 NDUFB4O95168 129 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 CXorf1O96002 111 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 IFNA7P01567 189 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 NBEAP1P0C6P0 100 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 LCN12Q6JVE5 192 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 PQLC2Q6ZP29 291 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 SUN5Q8TC36 379 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 SAT2Q96F10 170 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-229ENST00000486665 GPR61Q9BZJ8 451 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 HRH4Q9H3N8 390 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 UBQLN2Q9UHD9 624 aa9.55□□□□□ -0.88
HDAC6-229ENST00000486665 SLC17A3O00476 420 aa9.54□□□□□ -0.88
HDAC6-229ENST00000486665 HLA-DMBP28068 263 aa9.54□□□□□ -0.88
HDAC6-229ENST00000486665 UBE2L3P68036 154 aaKnown RBP9.54□□□□□ -0.88
HDAC6-229ENST00000486665 PAFAH1B2P68402 229 aa9.54□□□□□ -0.88
HDAC6-229ENST00000486665 IQCF2Q8IXL9 164 aa9.54□□□□□ -0.88
HDAC6-229ENST00000486665 SPAG8Q99932 426 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-229ENST00000486665 TRAV2A0A0B4J234 112 aa9.53□□□□□ -0.88
HDAC6-229ENST00000486665 TRAV1-1A0A0B4J248 108 aa9.53□□□□□ -0.88
HDAC6-229ENST00000486665 BLOC1S1P78537 153 aa9.53□□□□□ -0.88
HDAC6-229ENST00000486665 EGFEM1PQ0D2K5 195 aa9.53□□□□□ -0.88
HDAC6-229ENST00000486665 GUK1Q16774 197 aa9.53□□□□□ -0.88
HDAC6-229ENST00000486665 C16orf92Q96LL3 132 aa9.53□□□□□ -0.88
HDAC6-229ENST00000486665 C20orf173Q96LM9 149 aa9.53□□□□□ -0.88
HDAC6-229ENST00000486665 OR4C46A6NHA9 309 aa9.52□□□□□ -0.89
HDAC6-229ENST00000486665 CD7P09564 240 aa9.52□□□□□ -0.89
HDAC6-229ENST00000486665 PRB4P10163 310 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-229ENST00000486665 MEOX2P50222 304 aa9.52□□□□□ -0.89
HDAC6-229ENST00000486665 RANP62826 216 aaKnown RBP9.52□□□□□ -0.89
HDAC6-229ENST00000486665 EXOC3-AS1Q8N2X6 119 aa9.52□□□□□ -0.89
HDAC6-229ENST00000486665 RNF182Q8N6D2 247 aa9.52□□□□□ -0.89
HDAC6-229ENST00000486665 LRRC20Q8TCA0 184 aa9.52□□□□□ -0.89
HDAC6-229ENST00000486665 ZNF331Q9NQX6 463 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-229ENST00000486665 TMEM167BQ9NRX6 74 aa9.52□□□□□ -0.89
HDAC6-229ENST00000486665 NMBP08949 121 aa9.51□□□□□ -0.89
HDAC6-229ENST00000486665 ZNF688P0C7X2 276 aa9.51□□□□□ -0.89
HDAC6-229ENST00000486665 ZNF767PQ75MW2 155 aa9.51□□□□□ -0.89
HDAC6-229ENST00000486665 LYPD6BQ8NI32 183 aa9.51□□□□□ -0.89
HDAC6-229ENST00000486665 LINC00052Q96N35 136 aa9.51□□□□□ -0.89
HDAC6-229ENST00000486665 PRR25Q96S07 402 aa9.51□□□□□ -0.89
HDAC6-229ENST00000486665 YTHDF2Q9Y5A9 579 aaKnown RBP9.51□□□□□ -0.89
HDAC6-229ENST00000486665 ZNF705FA8MVS1 300 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-229ENST00000486665 ISLRO14498 428 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 ZNF253O75346 499 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 HBE1P02100 147 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 ID1P41134 155 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 PSMB3P49720 205 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 DEFB1P60022 68 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 UBE2G2P60604 165 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 PDE6HQ13956 83 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 ODF3L2Q3SX64 289 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 SLC50A1Q9BRV3 221 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 Q9H3A6 140 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 C19orf73Q9NVV2 129 aa9.5□□□□□ -0.89
HDAC6-229ENST00000486665 PGPA6NDG6 321 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 FAM74A7A6NL05 159 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 PRAC2D3DTV9 90 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 M0R3E3 92 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 DEFB131AP59861 70 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 CD81P60033 236 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 PSG9Q00887 426 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 ICAM4Q14773 271 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 ZNF124Q15973 351 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 PSG3Q16557 428 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 PSMG4Q5JS54 123 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 SAMD13Q5VXD3 122 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 APRG1Q8IVJ8 170 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 Q8N1Y9 231 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 MAP6D1Q9H9H5 199 aa9.49□□□□□ -0.89
HDAC6-229ENST00000486665 GNG13Q9P2W3 67 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms