RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 CLEC5AQ9NY25 188 aa13.26□□□□□ -0.29
COL1A1-207ENST00000486572 TRAV5A0A0B4J249 113 aa13.25□□□□□ -0.29
COL1A1-207ENST00000486572 IFNA5P01569 189 aa13.25□□□□□ -0.29
COL1A1-207ENST00000486572 IGLC2P0DOY2 106 aa13.25□□□□□ -0.29
COL1A1-207ENST00000486572 GCSAMLQ5JQS6 135 aa13.25□□□□□ -0.29
COL1A1-207ENST00000486572 CSNK1G2-AS1Q8NCQ2 148 aa13.25□□□□□ -0.29
COL1A1-207ENST00000486572 ZNF738Q8NE65 137 aa13.25□□□□□ -0.29
COL1A1-207ENST00000486572 SLC50A1Q9BRV3 221 aa13.25□□□□□ -0.29
COL1A1-207ENST00000486572 HRH4Q9H3N8 390 aa13.25□□□□□ -0.29
COL1A1-207ENST00000486572 XCL2Q9UBD3 114 aa13.25□□□□□ -0.29
COL1A1-207ENST00000486572 C11orf68Q9H3H3 251 aaKnown RBP13.24□□□□□ -0.29
COL1A1-207ENST00000486572 ZNF331Q9NQX6 463 aaPredicted RBP13.24□□□□□ -0.29
COL1A1-207ENST00000486572 DNAH7Q8WXX0 4024 aa13.23□□□□□ -0.29
COL1A1-207ENST00000486572 ZNF705EA8MWA4 302 aaPredicted RBP13.23□□□□□ -0.29
COL1A1-207ENST00000486572 SNRPCP09234 159 aaKnown RBP13.23□□□□□ -0.29
COL1A1-207ENST00000486572 HLA-DMBP28068 263 aa13.23□□□□□ -0.29
COL1A1-207ENST00000486572 PSG9Q00887 426 aa13.23□□□□□ -0.29
COL1A1-207ENST00000486572 PSG3Q16557 428 aa13.23□□□□□ -0.29
COL1A1-207ENST00000486572 GUK1Q16774 197 aa13.23□□□□□ -0.29
COL1A1-207ENST00000486572 SCGB1C1Q8TD33 95 aa13.23□□□□□ -0.29
COL1A1-207ENST00000486572 PARD6GQ9BYG4 376 aaPredicted RBP13.23□□□□□ -0.29
COL1A1-207ENST00000486572 A8MTW9 85 aa13.22□□□□□ -0.29
COL1A1-207ENST00000486572 H3BQ15 152 aa13.22□□□□□ -0.29
COL1A1-207ENST00000486572 H3BTX0 84 aa13.22□□□□□ -0.29
COL1A1-207ENST00000486572 SLC17A3O00476 420 aa13.22□□□□□ -0.29
COL1A1-207ENST00000486572 DUSP14O95147 198 aaKnown RBP13.22□□□□□ -0.29
COL1A1-207ENST00000486572 CNN1P51911 297 aaKnown RBP13.22□□□□□ -0.29
COL1A1-207ENST00000486572 AQP10Q96PS8 301 aa13.22□□□□□ -0.29
COL1A1-207ENST00000486572 SLC35B3Q9H1N7 401 aa13.22□□□□□ -0.29
COL1A1-207ENST00000486572 TMEM14CQ9P0S9 112 aa13.22□□□□□ -0.29
COL1A1-207ENST00000486572 MIFP14174 115 aa13.21□□□□□ -0.29
COL1A1-207ENST00000486572 FXYD7P58549 80 aa13.21□□□□□ -0.29
COL1A1-207ENST00000486572 Q5BKY6 102 aa13.21□□□□□ -0.29
COL1A1-207ENST00000486572 Q8NAQ8 132 aa13.21□□□□□ -0.29
COL1A1-207ENST00000486572 MRPL32Q9BYC8 188 aaKnown RBP13.21□□□□□ -0.29
COL1A1-207ENST00000486572 MFFQ9GZY8 342 aa13.21□□□□□ -0.29
COL1A1-207ENST00000486572 WFDC1Q9HC57 220 aa13.21□□□□□ -0.29
COL1A1-207ENST00000486572 X6R8D5 127 aa13.21□□□□□ -0.29
COL1A1-207ENST00000486572 ZNF705DP0CH99 300 aaPredicted RBP13.2□□□□□ -0.3
COL1A1-207ENST00000486572 ZNF705BP0CI00 300 aaPredicted RBP13.2□□□□□ -0.3
COL1A1-207ENST00000486572 AMTNQ6UX39 209 aa13.2□□□□□ -0.3
COL1A1-207ENST00000486572 OR8A1Q8NGG7 326 aa13.2□□□□□ -0.3
COL1A1-207ENST00000486572 RPUSD4Q96CM3 377 aaKnown RBP13.2□□□□□ -0.3
COL1A1-207ENST00000486572 SAT2Q96F10 170 aaPredicted RBP13.2□□□□□ -0.3
COL1A1-207ENST00000486572 ZNF586Q9NXT0 402 aa13.2□□□□□ -0.3
COL1A1-207ENST00000486572 IGHV4-28A0A0C4DH34 117 aa13.19□□□□□ -0.3
COL1A1-207ENST00000486572 DEFB4AO15263 64 aa13.19□□□□□ -0.3
COL1A1-207ENST00000486572 ZNF253O75346 499 aa13.19□□□□□ -0.3
COL1A1-207ENST00000486572 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-207ENST00000486572 FFAR4Q5NUL3 377 aa13.19□□□□□ -0.3
COL1A1-207ENST00000486572 MIR17HGQ75NE6 70 aa13.19□□□□□ -0.3
COL1A1-207ENST00000486572 OR2T35Q8NGX2 323 aa13.19□□□□□ -0.3
COL1A1-207ENST00000486572 SLC25A2Q9BXI2 301 aa13.19□□□□□ -0.3
COL1A1-207ENST00000486572 FUT9Q9Y231 359 aa13.19□□□□□ -0.3
COL1A1-207ENST00000486572 TRBV19A0A075B6N1 114 aa13.18□□□□□ -0.3
COL1A1-207ENST00000486572 CXorf65A6NEN9 183 aa13.18□□□□□ -0.3
COL1A1-207ENST00000486572 PYYP10082 97 aa13.18□□□□□ -0.3
COL1A1-207ENST00000486572 HIST1H1EP10412 219 aaKnown RBP13.18□□□□□ -0.3
COL1A1-207ENST00000486572 PMS2P11Q13670 270 aa13.18□□□□□ -0.3
COL1A1-207ENST00000486572 ZNF266Q14584 549 aa13.18□□□□□ -0.3
COL1A1-207ENST00000486572 ZNF705AQ6ZN79 300 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-207ENST00000486572 FAM167A-AS1Q96KT0 104 aa13.18□□□□□ -0.3
COL1A1-207ENST00000486572 FXYD6-FXYD2A0A087WZ82 144 aa13.17□□□□□ -0.3
COL1A1-207ENST00000486572 ZNF705FA8MVS1 300 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-207ENST00000486572 AMBPP02760 352 aa13.17□□□□□ -0.3
COL1A1-207ENST00000486572 RBMY1A1P0DJD3 496 aaKnown RBP13.17□□□□□ -0.3
COL1A1-207ENST00000486572 RBMY1CP0DJD4 496 aa13.17□□□□□ -0.3
COL1A1-207ENST00000486572 PDE6HQ13956 83 aa13.17□□□□□ -0.3
COL1A1-207ENST00000486572 RBMY1FQ15415 496 aaKnown RBP13.17□□□□□ -0.3
COL1A1-207ENST00000486572 INO80EQ8NBZ0 244 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-207ENST00000486572 TIMM9Q9Y5J7 89 aa13.17□□□□□ -0.3
COL1A1-207ENST00000486572 BOLA2-SMG1P6H3BVE0 249 aa13.16□□□□□ -0.3
COL1A1-207ENST00000486572 PRB4P10163 310 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-207ENST00000486572 RHOBP62745 196 aa13.16□□□□□ -0.3
COL1A1-207ENST00000486572 SPINK13Q1W4C9 94 aa13.16□□□□□ -0.3
COL1A1-207ENST00000486572 C11orf45Q8TAV5 145 aa13.16□□□□□ -0.3
COL1A1-207ENST00000486572 NEU1Q99519 415 aa13.16□□□□□ -0.3
COL1A1-207ENST00000486572 TNFSF18Q9UNG2 199 aa13.16□□□□□ -0.3
COL1A1-207ENST00000486572 GOLT1BQ9Y3E0 138 aa13.16□□□□□ -0.3
COL1A1-207ENST00000486572 CSMD3Q7Z407 3707 aa13.16□□□□□ -0.3
COL1A1-207ENST00000486572 IGHV3OR16-12A0A075B7B8 117 aa13.15□□□□□ -0.3
COL1A1-207ENST00000486572 RNF222A6NCQ9 220 aa13.15□□□□□ -0.3
COL1A1-207ENST00000486572 M0R2Z0 102 aa13.15□□□□□ -0.3
COL1A1-207ENST00000486572 NDUFB4O95168 129 aa13.15□□□□□ -0.3
COL1A1-207ENST00000486572 OR10J6PQ8NGY7 276 aa13.15□□□□□ -0.3
COL1A1-207ENST00000486572 BLNKQ8WV28 456 aa13.15□□□□□ -0.3
COL1A1-207ENST00000486572 IGF2BP2-AS1Q96M15 143 aa13.15□□□□□ -0.3
COL1A1-207ENST00000486572 PAXXQ9BUH6 204 aa13.15□□□□□ -0.3
COL1A1-207ENST00000486572 OR51M1Q9H341 326 aa13.15□□□□□ -0.3
COL1A1-207ENST00000486572 PPP1R14DQ9NXH3 145 aa13.15□□□□□ -0.3
COL1A1-207ENST00000486572 RFNGQ9Y644 331 aa13.15□□□□□ -0.3
COL1A1-207ENST00000486572 NUPR2A6NF83 97 aa13.14□□□□□ -0.31
COL1A1-207ENST00000486572 SMIM9A6NGZ8 99 aa13.14□□□□□ -0.31
COL1A1-207ENST00000486572 PRAC2D3DTV9 90 aa13.14□□□□□ -0.31
COL1A1-207ENST00000486572 G3V3Q6 166 aa13.14□□□□□ -0.31
COL1A1-207ENST00000486572 OR7C2O60412 319 aa13.14□□□□□ -0.31
COL1A1-207ENST00000486572 INSP01308 110 aa13.14□□□□□ -0.31
COL1A1-207ENST00000486572 ACOT6Q3I5F7 207 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-207ENST00000486572 C1orf158Q8N1D5 194 aa13.14□□□□□ -0.31
COL1A1-207ENST00000486572 HSD17B11Q8NBQ5 300 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms