RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TRGV9Q99603 122 aa9.87□□□□□ -0.83
U2AF1-211ENST00000486519 TPRKBQ9Y3C4 175 aa9.87□□□□□ -0.83
U2AF1-211ENST00000486519 SFTA3P0C7M3 94 aa9.86□□□□□ -0.83
U2AF1-211ENST00000486519 BLNKQ8WV28 456 aa9.86□□□□□ -0.83
U2AF1-211ENST00000486519 BAALCQ8WXS3 180 aa9.86□□□□□ -0.83
U2AF1-211ENST00000486519 H3BRN7 92 aa9.85□□□□□ -0.83
U2AF1-211ENST00000486519 TEPPQ6URK8 271 aa9.85□□□□□ -0.83
U2AF1-211ENST00000486519 C9orf47Q6ZRZ4 202 aa9.85□□□□□ -0.83
U2AF1-211ENST00000486519 ZNF431Q8TF32 576 aaPredicted RBP9.85□□□□□ -0.83
U2AF1-211ENST00000486519 SLC35E1Q96K37 410 aa9.85□□□□□ -0.83
U2AF1-211ENST00000486519 MRPL32Q9BYC8 188 aaKnown RBP9.85□□□□□ -0.83
U2AF1-211ENST00000486519 TP53TG3Q9ULZ0 132 aa9.85□□□□□ -0.83
U2AF1-211ENST00000486519 RBFOX3A6NFN3 312 aa9.84□□□□□ -0.83
U2AF1-211ENST00000486519 CT45A10P0DMU9 189 aa9.84□□□□□ -0.83
U2AF1-211ENST00000486519 ACOT6Q3I5F7 207 aaPredicted RBP9.84□□□□□ -0.83
U2AF1-211ENST00000486519 ZBTB8BQ8NAP8 495 aaPredicted RBP9.84□□□□□ -0.83
U2AF1-211ENST00000486519 VGLL1Q99990 258 aa9.84□□□□□ -0.83
U2AF1-211ENST00000486519 PYGO2Q9BRQ0 406 aa9.84□□□□□ -0.83
U2AF1-211ENST00000486519 C8orf4Q9NR00 106 aa9.84□□□□□ -0.83
U2AF1-211ENST00000486519 ATG12O94817 140 aa9.83□□□□□ -0.84
U2AF1-211ENST00000486519 TCL1AP56279 114 aa9.83□□□□□ -0.84
U2AF1-211ENST00000486519 ASAH1Q13510 395 aa9.83□□□□□ -0.84
U2AF1-211ENST00000486519 LCE2AQ5TA79 106 aaPredicted RBP9.83□□□□□ -0.84
U2AF1-211ENST00000486519 Q6ZQT7 251 aa9.83□□□□□ -0.84
U2AF1-211ENST00000486519 C10orf67Q8IYJ2 551 aa9.83□□□□□ -0.84
U2AF1-211ENST00000486519 RBPMSQ93062 196 aaKnown RBP9.83□□□□□ -0.84
U2AF1-211ENST00000486519 TMEM56-RWDD3S4R434 201 aa9.83□□□□□ -0.84
U2AF1-211ENST00000486519 RCVRNP35243 200 aa9.82□□□□□ -0.84
U2AF1-211ENST00000486519 GPX4P36969 197 aaPredicted RBP9.82□□□□□ -0.84
U2AF1-211ENST00000486519 LHFPL1Q86WI0 220 aa9.82□□□□□ -0.84
U2AF1-211ENST00000486519 FAM219AQ8IW50 185 aa9.82□□□□□ -0.84
U2AF1-211ENST00000486519 SELENOHQ8IZQ5 122 aaKnown RBP9.82□□□□□ -0.84
U2AF1-211ENST00000486519 LGI3Q8N145 548 aa9.82□□□□□ -0.84
U2AF1-211ENST00000486519 GPX8Q8TED1 209 aa9.82□□□□□ -0.84
U2AF1-211ENST00000486519 ZNF479Q96JC4 524 aa9.82□□□□□ -0.84
U2AF1-211ENST00000486519 GPR82Q96P67 336 aa9.82□□□□□ -0.84
U2AF1-211ENST00000486519 SLC45A2Q9UMX9 530 aa9.82□□□□□ -0.84
U2AF1-211ENST00000486519 A0A087X0K7 114 aa9.81□□□□□ -0.84
U2AF1-211ENST00000486519 GABARAPH6UMI1 98 aa9.81□□□□□ -0.84
U2AF1-211ENST00000486519 GABARAPO95166 117 aa9.81□□□□□ -0.84
U2AF1-211ENST00000486519 CDS2O95674 445 aa9.81□□□□□ -0.84
U2AF1-211ENST00000486519 FABP1P07148 127 aa9.81□□□□□ -0.84
U2AF1-211ENST00000486519 GLYATL2Q8WU03 294 aa9.81□□□□□ -0.84
U2AF1-211ENST00000486519 SHANK2-AS3Q9BTD1 123 aa9.81□□□□□ -0.84
U2AF1-211ENST00000486519 TMEM147Q9BVK8 224 aa9.81□□□□□ -0.84
U2AF1-211ENST00000486519 RBKSQ9H477 322 aa9.81□□□□□ -0.84
U2AF1-211ENST00000486519 PRR13Q9NZ81 148 aa9.81□□□□□ -0.84
U2AF1-211ENST00000486519 BOLA1Q9Y3E2 137 aa9.81□□□□□ -0.84
U2AF1-211ENST00000486519 TRGV4A0A0C4DH28 118 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 H3BTX0 84 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 PANO1I0J062 215 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 MRPS12O15235 138 aaKnown RBP9.8□□□□□ -0.84
U2AF1-211ENST00000486519 TNFSF8P32971 234 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 PRSS3P35030 304 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 CD300CQ08708 224 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 SLAQ13239 276 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 MORN5Q5VZ52 161 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 NOXA1Q86UR1 476 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 ZNF680Q8NEM1 530 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 DTD1Q8TEA8 209 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 ZNF486Q96H40 463 aaPredicted RBP9.8□□□□□ -0.84
U2AF1-211ENST00000486519 DNAJC30Q96LL9 226 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 U3KQ87 197 aa9.8□□□□□ -0.84
U2AF1-211ENST00000486519 SLC17A3O00476 420 aa9.79□□□□□ -0.84
U2AF1-211ENST00000486519 BTN1A1Q13410 526 aa9.79□□□□□ -0.84
U2AF1-211ENST00000486519 PCNPQ8WW12 178 aaKnown RBP9.79□□□□□ -0.84
U2AF1-211ENST00000486519 PAXXQ9BUH6 204 aa9.79□□□□□ -0.84
U2AF1-211ENST00000486519 TMEM222Q9H0R3 208 aa9.79□□□□□ -0.84
U2AF1-211ENST00000486519 ZNF846Q147U1 533 aa9.78□□□□□ -0.84
U2AF1-211ENST00000486519 ANXA2RQ3ZCQ2 193 aa9.78□□□□□ -0.84
U2AF1-211ENST00000486519 GGNBP1Q5YKI7 109 aa9.78□□□□□ -0.84
U2AF1-211ENST00000486519 OR13C8Q8NGS7 320 aa9.78□□□□□ -0.84
U2AF1-211ENST00000486519 TMEM37Q8WXS4 190 aa9.78□□□□□ -0.84
U2AF1-211ENST00000486519 TM2D2Q9BX73 214 aa9.78□□□□□ -0.84
U2AF1-211ENST00000486519 ZNF331Q9NQX6 463 aaPredicted RBP9.78□□□□□ -0.84
U2AF1-211ENST00000486519 COPZ2Q9P299 210 aa9.78□□□□□ -0.84
U2AF1-211ENST00000486519 RNF222A6NCQ9 220 aa9.77□□□□□ -0.85
U2AF1-211ENST00000486519 PMS2P5A8MQ11 134 aa9.77□□□□□ -0.85
U2AF1-211ENST00000486519 RPL7P18124 248 aaKnown RBP9.77□□□□□ -0.85
U2AF1-211ENST00000486519 TMEM268Q5VZI3 342 aa9.77□□□□□ -0.85
U2AF1-211ENST00000486519 EIF4E3Q8N5X7 224 aaKnown RBP9.77□□□□□ -0.85
U2AF1-211ENST00000486519 LRRC20Q8TCA0 184 aa9.77□□□□□ -0.85
U2AF1-211ENST00000486519 S100A16Q96FQ6 103 aaKnown RBP9.77□□□□□ -0.85
U2AF1-211ENST00000486519 C7orf71A4D174 169 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 PRSS46E5RG02 174 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 LEPP41159 167 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 PPT1P50897 306 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 BPIFCQ8NFQ6 507 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 OR4D10Q8NGI6 311 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 LINC01600Q96MT4 127 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 TXNDC17Q9BRA2 123 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 SLC25A31Q9H0C2 315 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 HSPB7Q9UBY9 170 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 RPH3ALQ9UNE2 315 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 SSR3Q9UNL2 185 aa9.76□□□□□ -0.85
U2AF1-211ENST00000486519 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.76□□□□□ -0.85
U2AF1-211ENST00000486519 TGFBR1P36897 503 aa9.75□□□□□ -0.85
U2AF1-211ENST00000486519 UBE2NLQ5JXB2 153 aa9.75□□□□□ -0.85
U2AF1-211ENST00000486519 PRR9Q5T870 116 aa9.75□□□□□ -0.85
U2AF1-211ENST00000486519 SNX29P2Q8IUI4 249 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms