RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 TRAV10A0A0B4J240 114 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 TMEM189A5PLL7 270 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 SIX6O95475 246 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 INSP01308 110 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 AMBPP02760 352 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 CXCL2P19875 107 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 FGF7P21781 194 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 CNN1P51911 297 aaKnown RBP9.31□□□□□ -0.92
CHMP3-208ENST00000486404 EMP1P54849 157 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 IFITM3Q01628 133 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 HIST1H1AQ02539 215 aaPredicted RBP9.31□□□□□ -0.92
CHMP3-208ENST00000486404 MIC13Q5XKP0 118 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 PATE2Q6UY27 113 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 ZNF705AQ6ZN79 300 aaPredicted RBP9.31□□□□□ -0.92
CHMP3-208ENST00000486404 SLC50A1Q9BRV3 221 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 NMES1Q9C002 83 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 PPP1R14DQ9NXH3 145 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 WDR83OSQ9Y284 106 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 RFNGQ9Y644 331 aa9.31□□□□□ -0.92
CHMP3-208ENST00000486404 SMIM9A6NGZ8 99 aa9.3□□□□□ -0.92
CHMP3-208ENST00000486404 E5RGE8 158 aa9.3□□□□□ -0.92
CHMP3-208ENST00000486404 HBE1P02100 147 aa9.3□□□□□ -0.92
CHMP3-208ENST00000486404 B2MP61769 119 aa9.3□□□□□ -0.92
CHMP3-208ENST00000486404 CYCSP99999 105 aaKnown RBP9.3□□□□□ -0.92
CHMP3-208ENST00000486404 ATP6V1FQ16864 119 aa9.3□□□□□ -0.92
CHMP3-208ENST00000486404 VWC2Q2TAL6 325 aa9.3□□□□□ -0.92
CHMP3-208ENST00000486404 Q6ZTC4 211 aa9.3□□□□□ -0.92
CHMP3-208ENST00000486404 C17orf77Q96MU5 243 aa9.3□□□□□ -0.92
CHMP3-208ENST00000486404 NEU1Q99519 415 aa9.3□□□□□ -0.92
CHMP3-208ENST00000486404 SLC25A31Q9H0C2 315 aa9.3□□□□□ -0.92
CHMP3-208ENST00000486404 CELA1Q9UNI1 258 aa9.3□□□□□ -0.92
CHMP3-208ENST00000486404 TEX48A0A1B0GUV7 120 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 ZNF705FA8MVS1 300 aaPredicted RBP9.29□□□□□ -0.92
CHMP3-208ENST00000486404 IGLL5B9A064 214 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 BOLA2-SMG1P6H3BVE0 249 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 MPDU1O75352 247 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 ZNF705DP0CH99 300 aaPredicted RBP9.29□□□□□ -0.92
CHMP3-208ENST00000486404 ZNF705BP0CI00 300 aaPredicted RBP9.29□□□□□ -0.92
CHMP3-208ENST00000486404 PET100P0DJ07 73 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 CXCL3P19876 107 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 RHOBP62745 196 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 IL15RAQ13261 267 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 OPCMLQ14982 345 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 OR11H7Q8NGC8 314 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 IGF2BP2-AS1Q96M15 143 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 DNAJC4Q9NNZ3 241 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 SLC39A9Q9NUM3 307 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 PXMP4Q9Y6I8 212 aa9.29□□□□□ -0.92
CHMP3-208ENST00000486404 LOC102723971A0A1B0GUV8 181 aa9.28□□□□□ -0.92
CHMP3-208ENST00000486404 M0R2Z0 102 aa9.28□□□□□ -0.92
CHMP3-208ENST00000486404 SNRPCP09234 159 aaKnown RBP9.28□□□□□ -0.92
CHMP3-208ENST00000486404 RPL29P47914 159 aaKnown RBP9.28□□□□□ -0.92
CHMP3-208ENST00000486404 TCTAP57738 103 aa9.28□□□□□ -0.92
CHMP3-208ENST00000486404 PSG3Q16557 428 aa9.28□□□□□ -0.92
CHMP3-208ENST00000486404 RRN3P1Q2M238 152 aa9.28□□□□□ -0.92
CHMP3-208ENST00000486404 ZNF767PQ75MW2 155 aa9.28□□□□□ -0.92
CHMP3-208ENST00000486404 OR8A1Q8NGG7 326 aa9.28□□□□□ -0.92
CHMP3-208ENST00000486404 OR5C1Q8NGR4 320 aa9.28□□□□□ -0.92
CHMP3-208ENST00000486404 TMEM37Q8WXS4 190 aa9.28□□□□□ -0.92
CHMP3-208ENST00000486404 RPUSD4Q96CM3 377 aaKnown RBP9.28□□□□□ -0.92
CHMP3-208ENST00000486404 MARVELD1Q9BSK0 173 aa9.28□□□□□ -0.92
CHMP3-208ENST00000486404 KCNIP2Q9NS61 270 aa9.28□□□□□ -0.92
CHMP3-208ENST00000486404 A8MTW9 85 aa9.27□□□□□ -0.93
CHMP3-208ENST00000486404 H3BTX0 84 aa9.27□□□□□ -0.93
CHMP3-208ENST00000486404 J3QL48 77 aa9.27□□□□□ -0.93
CHMP3-208ENST00000486404 MRPS12O15235 138 aaKnown RBP9.27□□□□□ -0.93
CHMP3-208ENST00000486404 SPART-AS1P0CW21 52 aa9.27□□□□□ -0.93
CHMP3-208ENST00000486404 CLINT1Q14677 625 aa9.27□□□□□ -0.93
CHMP3-208ENST00000486404 MORN5Q5VZ52 161 aa9.27□□□□□ -0.93
CHMP3-208ENST00000486404 AMTNQ6UX39 209 aa9.27□□□□□ -0.93
CHMP3-208ENST00000486404 BAP18Q8IXM2 172 aa9.27□□□□□ -0.93
CHMP3-208ENST00000486404 THAP6Q8TBB0 222 aa9.27□□□□□ -0.93
CHMP3-208ENST00000486404 NPCDR1Q9BY65 106 aa9.27□□□□□ -0.93
CHMP3-208ENST00000486404 ZNF331Q9NQX6 463 aaPredicted RBP9.27□□□□□ -0.93
CHMP3-208ENST00000486404 OR5AC2Q9NZP5 309 aa9.27□□□□□ -0.93
CHMP3-208ENST00000486404 DEFB131BA0A096LNP1 70 aa9.26□□□□□ -0.93
CHMP3-208ENST00000486404 SLC17A3O00476 420 aa9.26□□□□□ -0.93
CHMP3-208ENST00000486404 GUK1Q16774 197 aa9.26□□□□□ -0.93
CHMP3-208ENST00000486404 C12orf74Q32Q52 190 aa9.26□□□□□ -0.93
CHMP3-208ENST00000486404 LGALS9CQ6DKI2 356 aa9.26□□□□□ -0.93
CHMP3-208ENST00000486404 OR10J6PQ8NGY7 276 aa9.26□□□□□ -0.93
CHMP3-208ENST00000486404 PPP1R1CQ8WVI7 109 aa9.26□□□□□ -0.93
CHMP3-208ENST00000486404 HYDINQ4G0P3 5121 aa9.26□□□□□ -0.93
CHMP3-208ENST00000486404 PLECQ15149 4684 aaKnown RBP9.26□□□□□ -0.93
CHMP3-208ENST00000486404 IGHV4-4A0A075B6R2 117 aa9.25□□□□□ -0.93
CHMP3-208ENST00000486404 TRAV12-2A0A075B6T6 113 aa9.25□□□□□ -0.93
CHMP3-208ENST00000486404 TRAV5A0A0B4J249 113 aa9.25□□□□□ -0.93
CHMP3-208ENST00000486404 IGLC2P0DOY2 106 aa9.25□□□□□ -0.93
CHMP3-208ENST00000486404 PRB4P10163 310 aaPredicted RBP9.25□□□□□ -0.93
CHMP3-208ENST00000486404 H2BFSP57053 126 aa9.25□□□□□ -0.93
CHMP3-208ENST00000486404 NHLH2Q02577 135 aa9.25□□□□□ -0.93
CHMP3-208ENST00000486404 FAM222AQ5U5X8 452 aa9.25□□□□□ -0.93
CHMP3-208ENST00000486404 C1orf158Q8N1D5 194 aa9.25□□□□□ -0.93
CHMP3-208ENST00000486404 DNAH1Q9P2D7 4330 aa9.24□□□□□ -0.93
CHMP3-208ENST00000486404 C17orf112F2Z3M2 114 aa9.24□□□□□ -0.93
CHMP3-208ENST00000486404 TMEM256Q8N2U0 113 aa9.24□□□□□ -0.93
CHMP3-208ENST00000486404 CHAC2Q8WUX2 184 aa9.24□□□□□ -0.93
CHMP3-208ENST00000486404 RNF126Q9BV68 326 aa9.24□□□□□ -0.93
CHMP3-208ENST00000486404 DKK2Q9UBU2 259 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms