RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 ZNF414Q96IQ9 312 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 EPDR1Q9UM22 224 aa11.25□□□□□ -0.61
POLR2J3-204ENST00000486319 IGHV3-35A0A0C4DH35 117 aa11.24□□□□□ -0.61
POLR2J3-204ENST00000486319 PPP1R2P9O14990 202 aa11.24□□□□□ -0.61
POLR2J3-204ENST00000486319 SLC35B1P78383 322 aa11.24□□□□□ -0.61
POLR2J3-204ENST00000486319 PDE6HQ13956 83 aa11.24□□□□□ -0.61
POLR2J3-204ENST00000486319 TMEM95Q3KNT9 176 aa11.24□□□□□ -0.61
POLR2J3-204ENST00000486319 FAM24BQ8N5W8 94 aa11.24□□□□□ -0.61
POLR2J3-204ENST00000486319 OCC1Q8TAD7 63 aa11.24□□□□□ -0.61
POLR2J3-204ENST00000486319 WFDC12Q8WWY7 111 aa11.24□□□□□ -0.61
POLR2J3-204ENST00000486319 KLK15Q9H2R5 256 aa11.24□□□□□ -0.61
POLR2J3-204ENST00000486319 PGPEP1LA6NFU8 196 aa11.23□□□□□ -0.61
POLR2J3-204ENST00000486319 PPP5D1E7EU14 171 aa11.23□□□□□ -0.61
POLR2J3-204ENST00000486319 H7BYZ3 331 aa11.23□□□□□ -0.61
POLR2J3-204ENST00000486319 S100A9P06702 114 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-204ENST00000486319 PSMB8P28062 276 aa11.23□□□□□ -0.61
POLR2J3-204ENST00000486319 CENPWQ5EE01 88 aa11.23□□□□□ -0.61
POLR2J3-204ENST00000486319 OR8I2Q8N0Y5 310 aa11.23□□□□□ -0.61
POLR2J3-204ENST00000486319 GPR82Q96P67 336 aa11.23□□□□□ -0.61
POLR2J3-204ENST00000486319 METTL26Q96S19 204 aa11.23□□□□□ -0.61
POLR2J3-204ENST00000486319 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
POLR2J3-204ENST00000486319 ZNF702PQ9H963 129 aa11.23□□□□□ -0.61
POLR2J3-204ENST00000486319 H3BTX0 84 aa11.22□□□□□ -0.61
POLR2J3-204ENST00000486319 NDUFA4O00483 81 aa11.22□□□□□ -0.61
POLR2J3-204ENST00000486319 PROK1P58294 105 aa11.22□□□□□ -0.61
POLR2J3-204ENST00000486319 ELOBQ15370 118 aa11.22□□□□□ -0.61
POLR2J3-204ENST00000486319 C1orf194Q5T5A4 169 aa11.22□□□□□ -0.61
POLR2J3-204ENST00000486319 OR4X2Q8NGF9 303 aa11.22□□□□□ -0.61
POLR2J3-204ENST00000486319 CMTM2Q8TAZ6 248 aa11.22□□□□□ -0.61
POLR2J3-204ENST00000486319 YPEL4Q96NS1 127 aa11.22□□□□□ -0.61
POLR2J3-204ENST00000486319 OR5B12Q96R08 314 aa11.22□□□□□ -0.61
POLR2J3-204ENST00000486319 BUB3O43684 328 aa11.21□□□□□ -0.61
POLR2J3-204ENST00000486319 TCRAP04437 139 aa11.21□□□□□ -0.61
POLR2J3-204ENST00000486319 PSG9Q00887 426 aa11.21□□□□□ -0.61
POLR2J3-204ENST00000486319 TMEM183BQ1AE95 376 aa11.21□□□□□ -0.61
POLR2J3-204ENST00000486319 TEX38Q6PEX7 206 aa11.21□□□□□ -0.61
POLR2J3-204ENST00000486319 Q8N2B8 174 aa11.21□□□□□ -0.61
POLR2J3-204ENST00000486319 SFRP2Q96HF1 295 aa11.21□□□□□ -0.61
POLR2J3-204ENST00000486319 IGF2BP2-AS1Q96M15 143 aa11.21□□□□□ -0.61
POLR2J3-204ENST00000486319 AURKAIP1Q9NWT8 199 aaPredicted RBP11.21□□□□□ -0.61
POLR2J3-204ENST00000486319 ZNF253O75346 499 aa11.2□□□□□ -0.62
POLR2J3-204ENST00000486319 IGHV3-11P01762 117 aa11.2□□□□□ -0.62
POLR2J3-204ENST00000486319 ELANEP08246 267 aa11.2□□□□□ -0.62
POLR2J3-204ENST00000486319 FOLR2P14207 255 aa11.2□□□□□ -0.62
POLR2J3-204ENST00000486319 S100PP25815 95 aa11.2□□□□□ -0.62
POLR2J3-204ENST00000486319 UBE2G1P62253 170 aa11.2□□□□□ -0.62
POLR2J3-204ENST00000486319 GNG5P63218 68 aa11.2□□□□□ -0.62
POLR2J3-204ENST00000486319 SIGLEC15Q6ZMC9 328 aa11.2□□□□□ -0.62
POLR2J3-204ENST00000486319 AAMDCQ9H7C9 122 aa11.2□□□□□ -0.62
POLR2J3-204ENST00000486319 KLF12Q9Y4X4 402 aa11.2□□□□□ -0.62
POLR2J3-204ENST00000486319 IGHV3OR16-8A0A075B7F1 116 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 K7EN84 100 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 GGCTO75223 188 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 ATF4P18848 351 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 RAB5AP20339 215 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 GALR1P47211 349 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 FOXE3Q13461 319 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 EXOC3-AS1Q8N2X6 119 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 OR10G8Q8NGN5 311 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 SMIM12Q96EX1 92 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 FMC1Q96HJ9 113 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 C17orf77Q96MU5 243 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 CITED1Q99966 193 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 PEF1Q9UBV8 284 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 RPH3ALQ9UNE2 315 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 URGCP-MRPS24S4R325 110 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 U3KQE9 123 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 A0A087X0K7 114 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 GCGP01275 180 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 IGLV2-8P01709 118 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 TRBV12-3P01733 135 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 KRTAP10-3P60369 221 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 LCNL1Q6ZST4 164 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 ARL6IP6Q8N6S5 226 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 LINC00479Q96M42 142 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 IMMP2LQ96T52 175 aa11.19□□□□□ -0.62
POLR2J3-204ENST00000486319 FBN3Q75N90 2809 aa11.18□□□□□ -0.62
POLR2J3-204ENST00000486319 K7EQM0 130 aa11.18□□□□□ -0.62
POLR2J3-204ENST00000486319 ISLRO14498 428 aa11.18□□□□□ -0.62
POLR2J3-204ENST00000486319 PFN1P07737 140 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-204ENST00000486319 MEOX2P50222 304 aa11.18□□□□□ -0.62
POLR2J3-204ENST00000486319 KCNIP4Q6PIL6 250 aa11.18□□□□□ -0.62
POLR2J3-204ENST00000486319 BAGE2Q86Y30 109 aa11.18□□□□□ -0.62
POLR2J3-204ENST00000486319 SMAD5-AS1Q9Y6J3 95 aa11.18□□□□□ -0.62
POLR2J3-204ENST00000486319 TRBV24-1A0A075B6N3 115 aa11.17□□□□□ -0.62
POLR2J3-204ENST00000486319 TRAV34A0A0B4J273 112 aa11.17□□□□□ -0.62
POLR2J3-204ENST00000486319 ZNF785A8K8V0 405 aa11.17□□□□□ -0.62
POLR2J3-204ENST00000486319 SLC17A3O00476 420 aa11.17□□□□□ -0.62
POLR2J3-204ENST00000486319 ERVFC1-1P60608 527 aa11.17□□□□□ -0.62
POLR2J3-204ENST00000486319 TRRAPQ9Y4A5 3859 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 TGIF2-C20orf24A0A0A6YYL0 155 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 TRBV6-1A0A0K0K1D8 114 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 SERTM2A0A1B0GWG4 89 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 CXCL1P09341 107 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 MGST1P10620 155 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 CSN1S1P47710 185 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 PRR31Q5SQ13 230 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 RNF152Q8N8N0 203 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 MYOZ3Q8TDC0 251 aa11.16□□□□□ -0.62
POLR2J3-204ENST00000486319 BTF3L4Q96K17 158 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms