RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 MAPK1IP1LQ8NDC0 245 aa8.92□□□□□ -0.98
HDAC6-228ENST00000486227 SIGMAR1Q99720 223 aa8.92□□□□□ -0.98
HDAC6-228ENST00000486227 LOXP28300 417 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-228ENST00000486227 TLN1Q9Y490 2541 aaKnown RBP8.92□□□□□ -0.98
HDAC6-228ENST00000486227 KRTAP27-1Q3LI81 207 aa8.92□□□□□ -0.98
HDAC6-228ENST00000486227 OTORQ9NRC9 128 aa8.92□□□□□ -0.98
HDAC6-228ENST00000486227 RPL15P61313 204 aaKnown RBP8.91□□□□□ -0.98
HDAC6-228ENST00000486227 Q6ZSR3 168 aa8.91□□□□□ -0.98
HDAC6-228ENST00000486227 MUC22E2RYF6 1773 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-228ENST00000486227 C10orf142B7Z368 130 aa8.91□□□□□ -0.98
HDAC6-228ENST00000486227 SYS1-DBNDD2H3BUS1 97 aa8.91□□□□□ -0.98
HDAC6-228ENST00000486227 UBE2L6O14933 153 aa8.91□□□□□ -0.98
HDAC6-228ENST00000486227 STPG4Q8N801 248 aa8.91□□□□□ -0.98
HDAC6-228ENST00000486227 OR9G4Q8NGQ1 327 aa8.91□□□□□ -0.98
HDAC6-228ENST00000486227 ARFGEF3Q5TH69 2177 aa8.91□□□□□ -0.98
HDAC6-228ENST00000486227 GRNP28799 593 aaKnown RBP8.91□□□□□ -0.98
HDAC6-228ENST00000486227 HAPLN4Q86UW8 402 aa8.91□□□□□ -0.98
HDAC6-228ENST00000486227 SONP18583 2426 aaKnown RBP8.91□□□□□ -0.98
HDAC6-228ENST00000486227 hDV102S1A0JD36 115 aa8.9□□□□□ -0.98
HDAC6-228ENST00000486227 ORMDL3Q8N138 153 aa8.9□□□□□ -0.98
HDAC6-228ENST00000486227 C15orf32Q32M92 178 aa8.9□□□□□ -0.98
HDAC6-228ENST00000486227 TEX36Q5VZQ5 186 aa8.9□□□□□ -0.98
HDAC6-228ENST00000486227 A0A1B0GWB2 263 aa8.9□□□□□ -0.98
HDAC6-228ENST00000486227 SAA4P35542 130 aa8.9□□□□□ -0.98
HDAC6-228ENST00000486227 SCRT1Q9BWW7 348 aa8.9□□□□□ -0.98
HDAC6-228ENST00000486227 A0A1W2PPI3 338 aa8.9□□□□□ -0.99
HDAC6-228ENST00000486227 PMS2P5A8MQ11 134 aa8.9□□□□□ -0.99
HDAC6-228ENST00000486227 CR1LQ2VPA4 569 aa8.9□□□□□ -0.99
HDAC6-228ENST00000486227 SPRNQ5BIV9 151 aa8.9□□□□□ -0.99
HDAC6-228ENST00000486227 C18orf32Q8TCD1 76 aa8.9□□□□□ -0.99
HDAC6-228ENST00000486227 NCOR1P1Q9H4R4 102 aa8.9□□□□□ -0.99
HDAC6-228ENST00000486227 PAX8Q06710 450 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 GTSCR1Q86UQ5 136 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 STHQ8IWL8 128 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 NUP35Q8NFH5 326 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 RNF114Q9Y508 228 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 OR11H12B2RN74 326 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 SEM1Q6ZVN7 128 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 CIARTQ8N365 385 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-228ENST00000486227 OR11H1Q8NG94 326 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 OR11H2Q8NH07 326 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 A0A087X0K7 114 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 CDKN1BP46527 198 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 FAM74A4Q5TZK3 123 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 FAM71F2Q6NXP2 309 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 C18orf15Q96N68 181 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 DUX3Q96PT4 197 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 TMEM14BQ9NUH8 114 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 PCNTO95613 3336 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 HBDP02042 147 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 CNTFRP26992 372 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 ZNF114Q8NC26 417 aa8.89□□□□□ -0.99
HDAC6-228ENST00000486227 SAP30O75446 220 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 ZNF502Q8TBZ5 544 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 TRGV9Q99603 122 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 PSG8Q9UQ74 426 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 TRAV8-6A0A0B4J262 113 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 EXOC3-AS1Q8N2X6 119 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 LINC01587Q99440 93 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 SLC25A39Q9BZJ4 359 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-228ENST00000486227 M0R381 172 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 ATP5LO75964 103 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 ESDP10768 282 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 CACNG7P62955 275 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 OR5AN1Q8NGI8 311 aa8.88□□□□□ -0.99
HDAC6-228ENST00000486227 UBE2E1P51965 193 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 CMC4P56277 68 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-228ENST00000486227 ZNF56Q15929 161 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 C19orf54Q5BKX5 351 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 SLC50A1Q9BRV3 221 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 DUSP14O95147 198 aaKnown RBP8.87□□□□□ -0.99
HDAC6-228ENST00000486227 HTN3P15516 51 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 DIAPH2-AS1Q14236 149 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 TMEM249Q2WGJ8 235 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 SAMD5Q5TGI4 173 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 TMEM160Q9NX00 188 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 NHP2Q9NX24 153 aaKnown RBP8.87□□□□□ -0.99
HDAC6-228ENST00000486227 V9GYV3 84 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 CEP295Q9C0D2 2601 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 TRBV20OR9-2A0A075B6H5 130 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 FNDC10F2Z333 226 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 EMP1P54849 157 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 GLMPQ8WWB7 406 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 KLK15Q9H2R5 256 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 SELENOKQ9Y6D0 94 aa8.87□□□□□ -0.99
HDAC6-228ENST00000486227 SHISA9B4DS77 424 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 PAX2Q02962 417 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 ZNF833PQ6ZTB9 187 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 BEX4Q9NWD9 120 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-228ENST00000486227 J3QLI3 93 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 IGLL1P15814 213 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 C11orf52Q96A22 123 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 MYO18BQ8IUG5 2567 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 ZNF329Q86UD4 541 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 PIP4P2Q8N4L2 257 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 IGHV1-69DA0A0B4J2H0 117 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 M0R3E3 92 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 NDUFS7O75251 213 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 IGHV1-69P01742 117 aa8.86□□□□□ -0.99
HDAC6-228ENST00000486227 Q71RC1 249 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms