RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 LY6HO94772 140 aa13.87□□□□□ -0.19
TNXB-205ENST00000486148 FOXA3P55318 350 aaPredicted RBP13.87□□□□□ -0.19
TNXB-205ENST00000486148 ZNF672Q499Z4 452 aaPredicted RBP13.87□□□□□ -0.19
TNXB-205ENST00000486148 GOLT1AQ6ZVE7 132 aa13.87□□□□□ -0.19
TNXB-205ENST00000486148 PTPRZ1P23471 2315 aaPredicted RBP13.86□□□□□ -0.19
TNXB-205ENST00000486148 CNIH1O95406 144 aa13.86□□□□□ -0.19
TNXB-205ENST00000486148 FOXC1Q12948 553 aa13.86□□□□□ -0.19
TNXB-205ENST00000486148 C12orf54Q6X4T0 127 aa13.86□□□□□ -0.19
TNXB-205ENST00000486148 DAZAP1Q96EP5 407 aaKnown RBP13.86□□□□□ -0.19
TNXB-205ENST00000486148 C17orf77Q96MU5 243 aa13.86□□□□□ -0.19
TNXB-205ENST00000486148 K7EIM0 57 aa13.86□□□□□ -0.19
TNXB-205ENST00000486148 PRNTQ86SH4 94 aa13.86□□□□□ -0.19
TNXB-205ENST00000486148 ARHGAP32A7KAX9 2087 aa13.85□□□□□ -0.19
TNXB-205ENST00000486148 PRSS47A8MTI9 375 aa13.85□□□□□ -0.19
TNXB-205ENST00000486148 G3V4G9 280 aa13.85□□□□□ -0.19
TNXB-205ENST00000486148 K7ENP7 123 aa13.85□□□□□ -0.19
TNXB-205ENST00000486148 GOSR1O95249 250 aa13.85□□□□□ -0.19
TNXB-205ENST00000486148 ASCL2Q99929 193 aa13.85□□□□□ -0.19
TNXB-205ENST00000486148 PEF1Q9UBV8 284 aaKnown RBP13.85□□□□□ -0.19
TNXB-205ENST00000486148 NPIPB6E9PJ23 425 aa13.84□□□□□ -0.19
TNXB-205ENST00000486148 CRXO43186 299 aaPredicted RBP13.84□□□□□ -0.19
TNXB-205ENST00000486148 RBPMS2Q6ZRY4 209 aaKnown RBP13.84□□□□□ -0.19
TNXB-205ENST00000486148 RNF5Q99942 180 aa13.84□□□□□ -0.19
TNXB-205ENST00000486148 SCRT2Q9NQ03 307 aa13.84□□□□□ -0.19
TNXB-205ENST00000486148 HILPDAQ9Y5L2 63 aa13.84□□□□□ -0.19
TNXB-205ENST00000486148 ZNF785A8K8V0 405 aa13.84□□□□□ -0.19
TNXB-205ENST00000486148 COL8A1P27658 744 aa13.84□□□□□ -0.19
TNXB-205ENST00000486148 UFSP1Q6NVU6 142 aa13.84□□□□□ -0.19
TNXB-205ENST00000486148 GFRA4Q9GZZ7 299 aa13.84□□□□□ -0.19
TNXB-205ENST00000486148 ABCA4P78363 2273 aa13.83□□□□□ -0.19
TNXB-205ENST00000486148 LIPFP07098 398 aa13.83□□□□□ -0.2
TNXB-205ENST00000486148 HOXB4P17483 251 aaPredicted RBP13.83□□□□□ -0.2
TNXB-205ENST00000486148 ARF6P62330 175 aa13.83□□□□□ -0.2
TNXB-205ENST00000486148 KLF17Q5JT82 389 aaPredicted RBP13.83□□□□□ -0.2
TNXB-205ENST00000486148 S4R3C0 116 aa13.83□□□□□ -0.2
TNXB-205ENST00000486148 SYS1-DBNDD2H3BUS1 97 aa13.83□□□□□ -0.2
TNXB-205ENST00000486148 LY6G5BQ8NDX9 201 aa13.83□□□□□ -0.2
TNXB-205ENST00000486148 SHANK2-AS3Q9BTD1 123 aa13.83□□□□□ -0.2
TNXB-205ENST00000486148 MCRIP2Q9BUT9 160 aaKnown RBP13.83□□□□□ -0.2
TNXB-205ENST00000486148 SOX21Q9Y651 276 aaPredicted RBP13.83□□□□□ -0.2
TNXB-205ENST00000486148 ANKHD1Q8IWZ3 2542 aaKnown RBP13.83□□□□□ -0.2
TNXB-205ENST00000486148 TRBV19A0A075B6N1 114 aa13.82□□□□□ -0.2
TNXB-205ENST00000486148 CLUHP3Q96NS8 147 aa13.82□□□□□ -0.2
TNXB-205ENST00000486148 PTPRQQ9UMZ3 2332 aa13.82□□□□□ -0.2
TNXB-205ENST00000486148 C7orf71A4D174 169 aa13.82□□□□□ -0.2
TNXB-205ENST00000486148 FAM231BA6NCW3 169 aa13.82□□□□□ -0.2
TNXB-205ENST00000486148 OVOL3O00110 214 aa13.82□□□□□ -0.2
TNXB-205ENST00000486148 KLRD1Q13241 179 aa13.82□□□□□ -0.2
TNXB-205ENST00000486148 C16orf54Q6UWD8 224 aa13.82□□□□□ -0.2
TNXB-205ENST00000486148 CFHR4Q92496 578 aa13.82□□□□□ -0.2
TNXB-205ENST00000486148 GAGE10A6NGK3 116 aa13.81□□□□□ -0.2
TNXB-205ENST00000486148 H3BRN7 92 aa13.81□□□□□ -0.2
TNXB-205ENST00000486148 NBR2O15453 112 aa13.81□□□□□ -0.2
TNXB-205ENST00000486148 HTR1DP28221 377 aa13.81□□□□□ -0.2
TNXB-205ENST00000486148 SRSF8Q9BRL6 282 aaKnown RBP13.81□□□□□ -0.2
TNXB-205ENST00000486148 SCNM1Q9BWG6 230 aa13.81□□□□□ -0.2
TNXB-205ENST00000486148 C1RLQ9NZP8 487 aa13.81□□□□□ -0.2
TNXB-205ENST00000486148 APOHP02749 345 aaPredicted RBP13.81□□□□□ -0.2
TNXB-205ENST00000486148 CDSNQ15517 529 aa13.81□□□□□ -0.2
TNXB-205ENST00000486148 ZNF491Q8N8L2 437 aa13.81□□□□□ -0.2
TNXB-205ENST00000486148 JMJD8Q96S16 334 aa13.81□□□□□ -0.2
TNXB-205ENST00000486148 CSMD1Q96PZ7 3565 aa13.81□□□□□ -0.2
TNXB-205ENST00000486148 SIGLEC15Q6ZMC9 328 aa13.8□□□□□ -0.2
TNXB-205ENST00000486148 BPIFA4PQ86YQ2 179 aa13.8□□□□□ -0.2
TNXB-205ENST00000486148 BCL6BQ8N143 479 aaPredicted RBP13.8□□□□□ -0.2
TNXB-205ENST00000486148 DPM3Q9P2X0 92 aa13.8□□□□□ -0.2
TNXB-205ENST00000486148 IGHV1-24A0A0C4DH33 117 aa13.8□□□□□ -0.2
TNXB-205ENST00000486148 A0A1W2PRD5 423 aa13.8□□□□□ -0.2
TNXB-205ENST00000486148 A0A1W2PRF3 423 aa13.8□□□□□ -0.2
TNXB-205ENST00000486148 A0A1W2PRM7 423 aa13.8□□□□□ -0.2
TNXB-205ENST00000486148 IL4P05112 153 aa13.8□□□□□ -0.2
TNXB-205ENST00000486148 HIST1H1AQ02539 215 aaPredicted RBP13.8□□□□□ -0.2
TNXB-205ENST00000486148 OR1N2Q8NGR9 330 aa13.8□□□□□ -0.2
TNXB-205ENST00000486148 HLA-DRB1P01911 266 aa13.79□□□□□ -0.2
TNXB-205ENST00000486148 C2orf91Q6ZV80 131 aa13.79□□□□□ -0.2
TNXB-205ENST00000486148 OR11H6Q8NGC7 330 aa13.79□□□□□ -0.2
TNXB-205ENST00000486148 RNF125Q96EQ8 232 aa13.79□□□□□ -0.2
TNXB-205ENST00000486148 CHEK1O14757 476 aa13.79□□□□□ -0.2
TNXB-205ENST00000486148 MRPS12O15235 138 aaKnown RBP13.78□□□□□ -0.2
TNXB-205ENST00000486148 GPR183P32249 361 aa13.78□□□□□ -0.2
TNXB-205ENST00000486148 TRBV6-1A0A0K0K1D8 114 aa13.78□□□□□ -0.2
TNXB-205ENST00000486148 HAX1O00165 279 aa13.78□□□□□ -0.2
TNXB-205ENST00000486148 FCGR2BP31994 310 aaPredicted RBP13.78□□□□□ -0.2
TNXB-205ENST00000486148 FBXL19-AS1Q494R0 122 aa13.78□□□□□ -0.2
TNXB-205ENST00000486148 TMEM238LA0A1B0GVL6 79 aa13.77□□□□□ -0.2
TNXB-205ENST00000486148 SNAI2O43623 268 aa13.77□□□□□ -0.2
TNXB-205ENST00000486148 NDUFA3O95167 84 aa13.77□□□□□ -0.2
TNXB-205ENST00000486148 ZNF138P52744 262 aa13.77□□□□□ -0.2
TNXB-205ENST00000486148 TMEM75Q8N9X5 138 aa13.77□□□□□ -0.2
TNXB-205ENST00000486148 NPBQ8NG41 125 aa13.77□□□□□ -0.2
TNXB-205ENST00000486148 PSG8Q9UQ74 426 aa13.77□□□□□ -0.2
TNXB-205ENST00000486148 M0R3E3 92 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 CCL21O00585 134 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 HES1Q14469 280 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 S100A7AQ86SG5 101 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 CHCHD1Q96BP2 118 aaKnown RBP13.77□□□□□ -0.21
TNXB-205ENST00000486148 ZNF414Q96IQ9 312 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 NAA38Q9BRA0 125 aaKnown RBP13.77□□□□□ -0.21
TNXB-205ENST00000486148 NDFIP1Q9BT67 221 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 WI2-2373I1.2A0A1W2PRP0 233 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms